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🔬 We're really excited to share a recent project that combines Nextflow and BioCompute!   The Seqera team built a plugin to seamlessly create BioCompute Objects (BCOs) from a Nextflow invocation, enhancing reproducibility and interoperability in bioinformatics research. 💻🧬   Using Nextflow's robust workflow management capabilities, you can now easily create a BCO from any Nextflow pipeline, including nf-core pipelines. These BCOs encapsulate key metadata and parameters, ensuring the reproducibility and traceability of computational workflows.   Curious to dive deeper? Check out the repository here: https://lnkd.in/ecWpmy9Y, where you'll find instructions in the README. Just enable the BCO plugin in your Nextflow config file! We're eager for feedback, so please send any questions, comments, or general thoughts our way!   Join us in advancing bioinformatics research through Nextflow and BioCompute, and let's pave the way for more reproducible and transparent science! 🔬 #Nextflow #Seqera #BioCompute #Bioinformatics #Reproducibility #OpenScience #Research #WorkflowManagement #ComputationalBiology

📢 Join us at the BioCompute Conference on May 10th to learn more about nextflow/BioCompute integration and many other exciting presentations! Register here: https://lnkd.in/eYQPaSNv #Nextflow #workflow #Bioinformatics #research #clinical #Seqera #reproducibility #streamline

Is analysis run provenance important to you, especially within accreditation settings in the USA? 🇺🇸 Then there's good news for anyone using Nextflow workflows! See below for how to easily generate BioCompute Objects for any run with only a few extra lines in a config file.

Open Source Science Initiative (OSSci) is organizing a special meetup for those involved in open-source scientific software in Seattle. If you're in the area, check out and secure your spot here: https://lnkd.in/gRZFDbK2 Many thanks to Tim Bonnemann for sharing about this event! #OpenSource #OSSci #OpenSourceSummit

Just wrapped up an EDA on the AMCAT dataset with Innomatics Research Labs.🚀 This dataset holds a treasure of information about candidates' skills, academic backgrounds, and test scores, offering valuable insights into the job market. Ready to decode the narrative within the numbers? 📈 Explore the full journey and dive into the data yourself on my GitHub repository: https://lnkd.in/geQxhG-G Let's not just analyze data; let's craft a career symphony. 💬🔍 #DataStorytelling #EDA #innomaticsresearchlabs #dataanalytics #statistics 🚀

🌐 The Wikidata #KnowledgeGraph is a free, open, & collaborative knowledge database storing structured data to support Wikipedia, the Free Encyclopedia & other Wikimedia Foundation projects. It’s an extremely valued resource created by the #SemanticWeb community & is relied on by many diverse groups. We believe in the democratization of its use. 🤝 That is why we collaborated with metaphacts GmbH to introduce aimed at enhancing its utility through improving the visual interface, the #semanticsearch capabilities, pathfinding algorithms & more, all powered by #GraphDB. 🆓 The interface built, hosted & maintained by metaphacts GmbH, at no cost to its users. In addition to being free to access, members of the research community are eligible for free academic metaphactory licenses & a targeted metaphactory app (available upon request). 👉 https://hubs.la/Q029K9C-0

Today, I’ll be sharing an exclusive look into the future of the internet through my latest newsletter on TechDBS. I'll dive into the ideas presented in Chris Nixon's "Read Write Own: Building the Next Era of the Internet," regarding Web 3.0. This edition offers insights into how decentralization principles might shape our digital interactions and the broader implications for our online communities. If you’re anxious on gaining a deeper understanding of Web 3.0 and exploring its potential to redefine our digital landscape, this discussion promises to be enriching. 👉I invite you to join this conversation by subscribing: https://lnkd.in/d6prAHdp #Web3 #DigitalTransformation #ReadWriteOwn #TechnologyInnovation

I have done an RNA-Seq for muy subject Algorithms for analysis sequences in bioinformatic. This folder contains two files, RNA-Seq (programmed in R) and a diagram to relate functions. This is a simple idea and mybe my code and diagram have some mistakes, but with work and persistance i’m sure i will do better next time! #UCAV #Bioinformatic #RNA-Seq #R #Genes

A must watch video from Viktor Farcic on open source software. He highlights some great points for open source based companies as well as open source users! Thanks for sharing Viktor Farcic

This is a very practical, get-to-the-bottom video on #OpenSource and all the recent news about software companies changing their well-known projects' licenses to SSPL/BSL/FSL/whatever. This message is central: "No Open Source project should be owned by a single company."