Ectoparasites and Endoparasites of Fish Form Networks With Different Structures
Ectoparasites and Endoparasites of Fish Form Networks With Different Structures
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(Received 28 November 2014; revised 8 January 2015; accepted 12 January 2015; first published online 16 March 2015)
SUMMARY
Hosts and parasites interact with each other in a variety of ways, and this diversity of interactions is reflected in the net-
works they form. To test for differences in interaction patterns of ecto- and endoparasites we analysed subnetworks formed
by each kind of parasites and their host fish species in fish–parasite networks for 22 localities. We assessed the proportion of
parasite species per host species, the relationship between parasite fauna composition and host taxonomy, connectance,
nestedness and modularity of each subnetwork (n = 44). Furthermore, we evaluated the similarity in host species compo-
sition among modules in ecto- and endoparasite subnetworks. We found several differences between subnetworks of fish
ecto- and endoparasites. The association with a higher number of host species observed among endoparasites resulted in
higher connectance and nestedness, and lower values of modularity in their subnetworks than in those of ectoparasites.
Taxonomically related host species tended to share ecto- or endoparasites with the same interaction intensity, but the
species composition of hosts tended to differ between modules formed by ecto- and endoparasites. Our results suggest
that different evolutionary and ecological processes are responsible for organizing the networks formed by ecto- and
endoparasites and fish.
Key words: host–parasite metazoan networks, antagonistic networks, connectance, nestedness, modularity.
Parasite life strategy and host phylogeny seem to phenomena, but they are not independent from each
affect specialization in host–parasite interactions, other, because they may occur in the same individual
which in turn explains why fish–parasite networks host. Therefore, we expected high similarity in host
are characterized by low levels of connectance and composition between the modules found in ecto- and
nestedness, and high levels of modularity (Bellay endoparasite networks.
et al. 2011, 2013; Krasnov et al. 2012; Lima et al.
2012; Poulin et al. 2013). Connectance is calculated
as the proportion of interactions that are actually MATERIALS AND METHODS
realised in relation to the total number of interactions
Data
that could be realised in the network (Pimm, 1982).
Nestedness occurs if the interactions of species with Twenty-two fish–parasite networks were obtained
fewer connections in a bipartite network represent a from the literature. The number of host and parasite
subset of the interactions made by species with species in the networks range from 6 to 91 and from
more connections (Almeida-Neto and Ulrich, 20 to 420, respectively (Table 1). We built the
2011). On the other hand, if there are subgroups of networks as adjacency matrices with host species in
species interacting with each other more than with the rows, parasite species in the columns and
other species of the same network (modules), the binary values in the cells (presence of absence of
network has a modular structure (Mello et al. interaction between a i row and a j column). To
2011). Although those archetypical topologies have control for an effect of spatial variations, we analysed
often been considered in studies on interaction pairs of subnetworks formed by either endo- or ecto-
patterns in different mutualistic and antagonistic parasites that belonged to the same complete
networks (see Lewinsohn and Prado, 2006), this network from a given locality.
approach is not commonly applied to studies on We restricted our analysis to metazoan parasites.
host–parasite networks (Poisot et al. 2013). The studied ectoparasites belong to the following
Interactions between hosts and parasites may taxonomic groups: Acari, Branchiura, Copepoda,
differ among parasite groups, if their biological Hirudinea, Isopoda, Mollusca, Monogenea and
traits and infestation processes result in distinct Myxosporea. The studied endoparasites were rep-
interaction constraints (Poisot et al. 2013). resented by Acanthocephala, Aspidobothrea,
Therefore, by looking at similarities and differences Cestoda, Digenea, Nematoda, Pentastomida, and
in the structure of interactions among ecto- and some species of Monogenea and Myxosporea (see
endoparasites, we can gain some insight on the Supplementary Material). In the studied networks,
underlying mechanisms of host-parasite networks. the larval and adult stages of a parasite species can
Lima et al. (2012) observed that variations in the have different niches (host species) in the same
specificity of interactions may be responsible for network. Therefore, different stages were regarded
differences in the structure of ecto- and endopara- as different ‘functional species’ in the network, as
site-fish networks. It is known that a single individ- in Vázquez et al. (2005) and Bellay et al. (2013).
ual host can harbour both ecto- and endoparasites.
Some processes that may lead fish species to share
ectoparasites may also lead them to share endopara- Network characteristics
sites, thereby putting those host species in the same To test for an influence of host taxonomy on host–
module within a network. parasite interactions, we calculated a correlation
Our goal in the present study was to understand the between the matrix of taxonomic distances (a
structure of networks formed by ecto- and endopara- proxy for phylogenetic distance; Koehler et al.
sites of fish. To fulfil this goal, we asked the following 2012) between fish species and the dissimilarity
questions (i) Do fish–ectoparasite and fish–endopara- matrix of parasite fauna composition with a Mantel
site subnetworks from the same locality differ in test, using 1000 randomizations and the Pearson
terms of host taxonomy and topology (proportion of method in the package vegan (Oksanen et al. 2014)
parasite species per host species, connectance, nested- for R 3·1·1 (R Development Core Team, 2014). To
ness and modularity)? (ii) Do host species that share build the dissimilarity matrix used in this analysis,
the same ectoparasites also share the same endopara- we used the Jaccard index available in the function
sites? First, we expected differences in the biology of vegdist in the package vegan. We calculated the
interactions between fish and their endo- and ectopar- matrix of taxonomic distance (MTD) for each
asites to result in networks with different structures. network using the following equation:
Second, the composition of modules in fish–parasite
networks was expected to reflect the taxonomic dis- MTD ¼ Md ðCw þ Ow þ Fw þ Gw þ SwÞ
tance between host species, as host niches tend to be
phylogenetically conserved (e.g. distribution in the where Md is the maximum distance found in the fish
water column, foraging strategy). Furthermore, ecto- community (maximum distance = 5, referring to the
and endoparasites infestations are different taxonomic category class) and Cw, Ow, Fw, Gw and
Ectoparasites and endoparasites of fish form networks with different structure 903
Table 1. Fish–parasite networks analysed in the present study. H is the number of host species and P is the
number of parasite species of each network
a
See Supplementary Material (online version only).
Sw are matrices for each taxonomic category (class, to calculate the degree of modularity (M) of
order, family, genus and species, respectively) gener- each network (Guimerà and Amaral, 2005). Values
ated by the function weight.taxo available in package of M = 0 indicate the absence of subgroups in the
ape (Paradis et al. 2004) for R. Nomenclature fol- network, whereas values near the maximum (M = 1)
lowed the taxonomic descriptions provided by indicate networks strongly divided into subgroups.
FishBase (Froese and Pauly, 2013). Therefore, Modularity was calculated in the program
species of the same genus exhibit a value of taxo- NETCARTO (Guimerà and Amaral, 2005). As
nomic distance (td) equal to 1, different genera NETCARTO does not include the Ce model for the
have td = 2, different families have td = 3, different estimation of significance, we used a function for R
orders have td = 4 and different classes have td = 5 (developed by Professor Nadson RS da Silva) to esti-
(see Rezende et al. 2007). mate the significance of M. With this function, we
We evaluated three general descriptors of network generated 1000 randomizations of each network
structure: connectance (C), nestedness (NODF), based on the null model Ce. For each matrix, M was
and modularity (M). To control the intrinsic nega- calculated in NETCARTO using a Fortran code
tive relationship between connectance and species (developed by Flávia M. D. Marquitti and first used
richness (Thébault and Fontaine, 2008), we used by Mello et al. 2011) to automate the calculation and
the residual connectance instead of absolute connec- compilation of M-values. For each network, the sig-
tance values. The residual connectance is calculated nificance (P) was obtained from the number of
by the residuals of the simple linear regression random matrices with M-values equal or higher than
between the log10-transformed values of observed the observed M-value, divided by the number of ran-
and possible interactions in each network (e.g. domized matrices. The R scripts are available from the
Fonseca and John, 1996). This analysis was carried authors upon request.
out in Statistica 7·0 (Statsoft, 2005).
The degree of nestedness was calculated using the
Data analysis
NODF index (nestedness metric based on overlap
and decreasing fill; Almeida-Neto et al. 2008). The Differences in the proportion of parasites per host,
significance of the observed NODF-values was esti- host taxonomy (Mantel r coefficient), residual con-
mated with a Monte Carlo procedure (1000 ran- nectance, nestedness and modularity between ecto-
domizations) based on the row–column probability and endoparasite networks were tested with a
null model, Ce, in the program Aninhado Wilcoxon test for paired samples. We applied a
(Guimarães and Guimarães, 2006). chi-squared test to compare the frequency of signifi-
To test for a modular structure in the host–parasite cant nested and modular structure between ecto- and
networks, we used a simulated annealing algorithm endoparasite networks.
S. Bellay and others 904
If the subnetworks of ecto- and endoparasites which suggests a weak relationship (r = 0·23 ± 0·08)
from the same locality were significantly modular, (Table 3).
we evaluated the similarity in the formation of
modules with a Mantel test (with the same procedure
DISCUSSION
mentioned above), considering only the host species
that were present in both networks. For this In the present study, we found that ecto- and endo-
purpose, we identified the host species in each parasite subnetworks from the same local assemblage
module of the network using the program differed in their topologies, thus implying that
NETCARTO, and built matrices whose rows and differences in the biology of parasitic interactions
columns corresponded to the host species present may lead to different interaction patterns at the com-
in both networks. The value ‘1’ was given to pairs munity level. Those differences were observed in all
of host species that occurred in the same module, topological metrics analysed.
and the value ‘0’ was given to pairs of host species One key point to consider is that the interior of
that did not occur in the same module. host can offer a higher diversity of sites (organs
and tissues) for parasite attachment than the external
surface of host. This might explain, for instance, the
RESULTS
greater number of endoparasite than ectoparasite
The species richness of ecto- and endoparasites species found. Another factor that potentially
varied in subnetworks from 6 to 181 and from 11 to influenced the richness patterns is the various
239, respectively. The values of all network descrip- routes of infection that are available to fish endopar-
tors obtained for each subnetwork are presented in asites (i.e. active penetration through the skin or
Table 2. The endoparasite subnetworks showed a trophic transmission). Those routes of infection con-
higher proportion of parasite species per host tribute to species diversity, because they increase the
species (PPHecto: mean = 1·49; PPHendo: mean = probability of host–parasite encounters and may
2·48; Wilcoxon T = 9; Z = 3·81; P < 0·001; Fig. 1a). reduce competition among parasite species (Poulin,
Thirty-three (75%) out of 44 subnetworks presented 1998; Dobson et al. 2008; Lima et al. 2012).
a positive and significant relation of parasite fauna Host characteristics, such as density, body size,
composition with host taxonomy. There were no diet and biogeographic distribution, may directly
differences in the Mr-values between ecto- and endo- influence parasite diversity (Takemoto et al. 2005;
parasite subnetworks (Mrecto: mean = 0·41; Mrendo: Poulin and Leung, 2011; Timi et al. 2011). Host
mean = 0·46; Wilcoxon T = 46; Z = 0·40; P = 0·683; species that are phylogenetically close tend to
Fig. 1b). We found significant differences in connec- present more similar parasite faunas than unrelated
tance, nestedness and modularity between ecto- and host species (Bellay et al. 2011, 2013; Krasnov
endoparasite subnetworks. Residual connectance was et al. 2012; Lima et al. 2012). This tendency would
higher in endoparasite subnetworks (Crecto: mean = result from parasite species persistence after specia-
12·53; Crendo: mean = 14·58; Wilcoxon T = 0; Z = tion events of the ancestral host and of the ecological
4·10; P < 0·001; Fig. 1c). similarity of these hosts (Poulin, 1998), and how we
Endoparasite subnetworks were more nested than observed, independent of the habitat type used by
ectoparasite subnetworks (NODFecto: mean = 16·23; parasites (ecto- or endoparasites).
NODFendo: mean = 23·11; Wilcoxon T = 39; Z = The residual connectance values were higher for
2·84; P = 0·004; Fig. 1d). In addition, nestedness endoparasite than ectoparasite networks. In net-
was significant in 17 (39%) out of 44 networks, and works, connectance provides important information
the number of significantly nested subnetworks that may allow the understanding of other structural
was higher among endoparasites (χ2 = 4·69; gl = 1; parameters, for example, an increase in connectance
P = 0·03). can reduce the possibility of nested and modular
The ectoparasite subnetworks were more modular structures simultaneously in a network (Fortuna
than the endoparasite networks (Mecto: mean = 0·62; et al. 2010). Due to the high specificity of host–para-
Mendo: mean = 0·47; Wilcoxon T = 11; Z = 3·74; P < site networks, the connectance values are generally
0·001; Fig. 1E). Twenty-eight (64%) out of 44 net- low (Bellay et al. 2013). In addition, several studies
works showed significant modularity, and the fre- have shown that the range of host species of the
quency of the significantly modular structures did endoparasites of fish may be wider than the range
not differ between subnetwork types (χ2 = 0; gl = 1; of host species of the ectoparasites (particularly
P = 1). monogeneans; Strona et al. 2013). The presence of
In 12 (55%) of the studied localities, both subnet- endoparasites in larval stages, that tend to be more
works (ecto- and endoparasites) were significantly generalist than adults (Bellay et al. 2013), also con-
modular. In eight of the localities with both tributed to increase the connectance.
modular subnetworks (67%) host module compo- In the present study, the nested structure of some
sition was correlated between ecto- and endoparasite networks was more closely related to the life strategy
subnetworks. However, we observed low Mr-values, of endoparasites, which suggests differences in the
Ectoparasites and endoparasites of fish form networks with different structure
Table 2. Parameters calculated for host–parasite networks in 22 localities considering ecto- and endoparasites in separate subnetworks
905
S. Bellay and others
Table 2. (Cont.)
Subnetworka S H Pa I PHP Mr P C rC NODF p(CE) M p(CE) mo
15 ecto 154 57 97 207 1·70 0·18 <0·001 3·74 −0·10 8·67 <0·001 0·67 0·002 17
endo 300 89 211 910 2·37 0·39 <0·001 4·85 0·23 15·83 <0·001 0·43 <0·001 10
16 ecto 159 51 108 188 2·12 0·52 <0·001 3·41 −0·15 6·09 0·020 0·73 <0·001 18
endo 207 58 149 404 2·57 0·23 <0·001 4·67 0·07 12·32 <0·001 0·53 0·001 10
17 ecto 57 31 26 82 0·84 0·23 0·022 10·17 −0·02 34·23 <0·001 0·46 0·770 –
endo 120 52 68 371 1·31 0·39 <0·001 10·49 0·25 29·67 <0·001 0·41 <0·001 4
18 ecto 66 31 35 125 1·13 <−0·01 0·472 11·52 0·08 41·78 <0·001 0·41 0·735 –
endo 93 48 45 311 0·94 0·30 <0·001 14·40 0·30 48·76 <0·001 0·33 0·208 –
19 ecto 24 13 11 34 0·85 0·06 0·394 23·78 0·03 51·56 0·010 0·30 0·957 –
endo 42 13 29 98 2·23 0·63 <0·001 25·99 0·24 36·39 0·170 0·30 0·767 –
20 ecto 112 48 64 125 1·33 0·45 <0·001 4·07 −0·17 6·5 0·170 0·77 <0·001 14
endo 91 32 59 137 1·84 0·31 <0·001 7·26 −0·01 12·09 0·060 0·61 0·764 –
21 ecto 95 38 57 98 1·50 0·43 <0·001 4·52 −0·19 4·6 0·900 0·81 <0·001 20
endo 234 76 158 425 2·08 0·40 <0·001 3·54 0·01 11·33 <0·001 0·56 0·001 15
22 ecto 16 10 6 22 0·60 0·36 0·146 36·67 0·06 35 0·870 0·24 0·911 –
endo 38 10 28 82 2·80 0·52 0·035 29·29 0·24 37·85 0·370 0·30 0·672 –
Abbreviations: S, species richness; H, host species; Pa, parasite species; I, host–parasite interactions; PHP, proportion of parasite species per host species; Mr, Mantel r statistic obtained
between the host taxonomic distance matrix and the host–parasite dissimilarity matrix; C, connectance; rC, residual connectance; NODF, nestedness; M, modularity; mo, module
number; ecto, ectoparasite–host network; endo, endoparasite–host network.
a
The identity of networks by numbers corresponds to that in Table 1.
906
Ectoparasites and endoparasites of fish form networks with different structure 907
Fig. 1. Parameters calculated for host–parasite networks in 22 localities considering ecto- and endoparasites in separate
subnetworks. (a) Proportion of parasite species per host species; (b) Mantel r statistic (the influence of host taxonomy on
host–parasite interactions); (c) residual connectance; (d) nestedness and (e) modularity.
Table 3. Mantel r statistic (Mr) calculated for the correlation between the dissimilarity in host species
composition of the modules found in ecto- and endoparasites networks
Networka Mr P
1. Middle Paraná River −0·04 1·000
2. Floodplain of Upper Paraná River 0·02 0·518
4. Parsnip River 0·35 0·017
6. Lake of the Woods 0·08 0·108
9. Coastal Waters of Rio de Janeiro 0·25 <0·001
11. Lake Michigan 0·24 0·005
12. Lake Superior 0·21 0·007
13. Guandu River 0·14 0·087
14. Lake Huron 0·16 <0·001
15. Lake Erie 0·09 0·006
16. Lake Ontario 0·25 <0·001
21. Gulf of Tonkin 0·31 <0·001
a
See Supplementary Material (online version only)
organization of host–parasite networks as a function 2013). For example, the ecology and factors related
of host type (e.g. taxonomic group; aquatic or terres- to the parasite life cycle may contribute to the nest-
trial). Studies on terrestrial hosts showed that the edness pattern, particularly among endoparasites
endoparasites have a greater degree of host specifi- (Lima et al. 2012). The reason for this effect is that
city than the ectoparasites in the networks (see the larval stages of these parasites tend to be more
Brito et al. 2014). A high degree of specificity in generalist than the adult parasites (Bellay et al.
the use of host species may result in relatively low 2013), as mentioned above. Furthermore, the adult
levels of nestedness. This has been used as a basis stages may have been obtained by trophic trans-
to infer that mutualistic and antagonistic networks mission, and the host species may have nested
have similar organizations, particularly for a model diets, thus allowing the formation of nested parasitic
system in which ectoparasites use terrestrial hosts fauna.
(Graham et al. 2009). Several hypotheses have We observed no differences between subnetworks
been presented in previous studies to explain the in the frequency of a significantly modular structure,
nestedness structure in networks (see Suweis et al. but they differed from one another in their degree of
S. Bellay and others 908
modularity. The presence of specialized interactions Gerais Research Foundation (FAPEMIG, APQ-
is an important factor when interpreting the modular 01043-13), CNPq (472372/2013-0), Research
structure of ecological networks (Mello et al. 2011). Program on Atlantic Forest Biodiversity (PPBio-
Parasitism in general is expected to be highly special- MA/CNPq) and Ecotone Inc. (‘Do Science and
ized (Thompson, 1994), which may explain the lack Get Support Program’). MAN received research fel-
of difference in the frequency of modular structures. lowships (306843/2012-9 and 306870/2012-6,
But variations in specificity made endoparasite respectively) from CNPq. The funders had no role
subnetworks be more nested than modular, while in study design, data collection and analysis,
the opposite was observed for ectoparasites. The decision to publish or preparation of the manuscript.
studied ectoparasite subnetworks presented an
average high modularity values, probably because
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