Covid 19 Article - 2
Covid 19 Article - 2
ISSN: 2454-132X
Impact Factor: 6.078
(Volume 7, Issue 3 - V7I3-1553)
Available online at: https://www.ijariit.com
ABSTRACT
In late December 2019, Chinese health authorities reported an outbreak of pneumonia of unknown origin in Wuhan, Hubei
Province. Wuhan This coronavirus was provisionally named 2019-nCoV, now SARS-COVID-2 according to the Coronavirus
Study Group of the International Committee on Taxonomy of Viruses. SARS-COVID-2 belongs to the Coronaviridae family,
Beta coronavirus genus, subgenus Sarbecovirus. Since its discovery, the virus has spread globally, causing thousands of
deaths and having an enormous impact on our health systems and economies. In this review, we summarize the current
knowledge about the epidemiology, phylogenesis, homology modeling, and diagnostics of SARS-COVID-2.
Keywords⸻ Middle East Respiratory Syndrome (MERS), Severe Acute Respiratory Syndrome (SARS), Receptor Binding
Domain [RBD], SARS-COVID-2, Ribavirin, Niclosamide, Netikriya –VataNeti, Jalaneti, nucleocapsid.
1. INTRODUCTION
Scientists first identified a human coronavirus in 1965. It caused a common cold. Later that decade, researchers found a group of
similar human and animal viruses and named them after their crown-like appearance. Seven coronaviruses can infect humans. The
one that causes SARS emerged in southern China in 2002 and quickly spread to 28 other countries. More than 8,000 people were
infected by July 2003, and 774 died. A small outbreak in 2004 involved only four more cases. This coronavirus causes fever,
headache, and respiratory problems such as cough and shortness of breath. MERS started in Saudi Arabia in 2012. Almost all of
the nearly 2,500 cases have been in people who live in or travel to the Middle East. This coronavirus is less contagious than its
SARS cousin but more deadly, killing 858 people. It has the same respiratory symptoms but can also cause kidney failure.
Coronavirus and respiratory syncytial virus (RSV) are two kinds of respiratory illnesses that have some similar symptoms. So far,
the new coronavirus appears to be more dangerous for adults, especially older ones. RSV is riskier for young children, but it can
also be serious for older people and those who have other health problems. Coronaviruses are a large family of viruses that are
known to cause illness ranging from the common cold to more severe diseases such as Middle East Respiratory Syndrome
(MERS) and Severe Acute Respiratory Syndrome (SARS). A novel coronavirus (COVID-19) was identified in 2019 in Wuhan,
China.
Spike glycoproteins on the corona virus particles has 74 surface spikes. A subset of corona virus specifically the members of beta
corona virus subgroup A, also have a shorter spike-like protein. which is called hemagglutinin esterase [HE][2]. The surface spikes
are homotrimers of the S-protein which is composed of an S1 and S2 subunits. S1 subunit forms the head of the spike and has the
receptor binding domain [RBD]. S2 subunit forms the stem which anchors the spike in the viral envelope and on protease
activation enable fusion [3].
RNA and n-protein: Inside the envelope, there is a nucleocapsid, which is formed from multiple copies of the nucleocapsid(N)
protein. Which are bound to the positive sense single standard RNA genome in continuous beads on a string type conformation.
The lipid bilayer envelope, membrane proteins, and nucleocapsid protect the virus when it is outside the host cell.
M-protein and E-protein are important in forming the viral envelope and maintaining its structural shape [4,6].
IMMUNOASSAY
Antibody test are performed with blood samples of infected person. This detects specific IgA &IgG against the virus in blood.
Antigen test consist of monoclonal antibody specifically for the viral antigen and seen by chromatographic particles in naked eye.
But this not much effective.[7]
LIST OF 32 TEST KITS BASED ON RT-PCR BY THE APPROVAL OF FDA AS EUA & CE-MARKED:
1. In Bios Smart Detect SARS-CoV-2 rRT-PCR Kit
2. Gnomegen COVID-19 RT-Digital PCR Detection Kit
3. CO-DIAGNOSTICS INC. Logix Smart Coronavirus 2019 (COVID-19) Kit
4. ScienCell SARS-CoV-2 Coronavirus Detection Kit
5. Luminex ARIES SARS-CoV-2 Assay
6. LuminexNxTAG® CoV Extended Panel
7. BD BioGX SARS-CoV-2 Reagents for the BD MAX™ System
8. BD SARS-CoV-2 Reagents for the BD MAX™ System
9. Ipsum Diagnostics COV-19 IDx Assay
10. Cellex qSARS-CoV-2 IgG/IgM Rapid Test
11. QIAGEN QIAstat-Dx Respiratory SARS-CoV-2 Panel
12. NeuMoDx Molecular™ SARS-CoV-2 Assay
13. Abbot ID NOW™ COVID-19 Assay
14. BGI Genomics Real-Time Fluorescent RT-PCR Kit
15. Avellino CoV-2 Test
16. PerkinElmer New Coronavirus Nucleic Acid Detection Kit
17. Mesa Biotech Accula™ SARS-Cov-2 Test
18. Bio Fire Diagnostics BioFire® COVID-19 Test
19. Cepheid Xpert® Xpress SARS-CoV-2 Test
20. Primerdesign Ltd. COVID-19 genesig Assay
21. GenMark Diagnostics ePlex® SARS-CoV-2 Test
22. DiaSorin Molecular Simplexa® COVID-19 Direct Assay
23. Abbott RealTime SARS-CoV-2 Assay
24. QuestDiagnostics SARS Coronavirus With CoV-2 RNA Test
25. QuidelLyra SARS-CoV-2 Assay
26. LabCorp COVID-19 Test
27. Hologic Panther Fusion®SARS-CoV-2Test
28. ThermoFisher Scientific TaqPath COVID-19 Multiplex Diagnostic Solution
29. DiaCartaQuantiVirus™ SARS-CoV-2 Test Kit
30. Roche cobas® SARS-CoV-2 Test
31. New York State Department of Public Health’s New York SARS-CoV-2 Diagnostic Panel
32.
The Centers for Disease Control and Prevention (CDC) 2019-nCoV Diagnostic Panel[11]
Siddha and ayurvedhic traditional system of medicines are used to treat the covid-19 under Indian system of medicine list of
herbs used are Plectranthusamboinicus, Sennaauriculata, Neotea Azadirachta Indica Neem, Macrotylomauniflorum,
Solanumprocumben, Solanumvirginianum, Justiciaadhatoda, Ecliptaprostrate, Ocimumtenuiflorum. Ginger (Chukku), Piper
longum (pippali), Clove (lavangam), Dusparsha (cirukancoriver), Akarakarabha, Kokilaksha (mulliver), Haritaki(kadukkaithol),
malabarnut(adathodaielai), Ajwain(Karpooravalli), Kusta (kostam), Guduchi (seenthilthandu), Bharangi (Siruthekku),Kalamegha
(siruthekku),Raja pata (Vattathiruppi),Musta (koraikizhangu) [13]. In this herbal drug treatment over 539 patients completely cured,
205 patients are under treatment, according to age condition admitted in the hospital are over theage of 70 years are 20 patients ,
above 50 years are 100 patients with the pre-existing diseased conditioned patients are getting out of the symptoms within one
week, with the use of traditional system of medicine mild infected patients getting cured within 4 to 10 days. But not the seriously
infected patients under ventilated condition[14].
Chines system of medicine various herbs are used Arneniacae Semen as Amarum,magnolia officinalis cortex,forsythiae fructus ,
glycyrrhizae radix et rhizome,ephedrae Herba,ptatycodonis radix, agasytachis Herba,atracpylovis rhizome, soutelariae radix. [15]
Naturopathy and yoga they by both are emerging in improving the immune system there is a heterogeneity in susceptibility to
infections during a flu epidemic. Psychological stress, Fitness and physical activity,Nutrition, Sleep, comorbid conditions and
lifestyle play a vital role in shaping this immune response. Improving Mucosal Immunity And reducing airway reactivityNetikriya
–VataNeti and Jalaneti followed by Kapalabhatikriya twice a week to reduce airway reactivity.Aromatic oils for inhalation such as
peppermint oil and eucalyptus oil and Tulsi[16], Improving InnateImmunity or immunehomeostasis Naturopathic Nutrition with
balanced diet consisting of plenty offruits and vegetables ReducingStress Psychologic Stress can increase susceptibility to
Why male is more susceptible than female? According to New york state department of health around 60% are male. The
European countries for disease prevention and control reported that male to female ration for covid-19 death across the Europe,
UKs office for national statistic reported death rate of covid-19 was double rate male than female [20]. For reasons the remain
novel corona virus appears to present a significant, higher mortality risk to man then women. covid-19 mortality rate for males
and females across different age and compare then will all cases mortality rates taken from human mortality database ,they have
bigger variation than the difference in all cases GMR(General mortality rate) ratio between 1:1 to 1:3 among the female and males
than over the age of 60-70 years death rate is higher existing between 1:2 to1:9. In wuhan fatality rate as 2.8% in males and 1.4%
in females respectively. Smoking prevalence in china is much closer in men and women 28% of men and 19% women smokers[21].
Controlled Measures:
SARS is an infectious disease, the controlled measure of SARS epidemic involved diagnosis, treatment, prevention. There is no
specific drug (or) vaccine were available for the SARS infection. If we diagnosis the infected person can isolate individual & can
give treatment than avoid spreading from index patient to others [24]. They are called negative pressure rooms because the air
pressure inside the room is lower than the air pressure outside the room. This means that when the door is opened, potentially
contaminated air or other dangerous particles from inside the room will not flow outside into non-contaminated areas.
We can diagnosis the SARS infection by following ways,
• SARS – COV may be suspected on a patient who has any symptoms including fever of 38degree C (or) higher.
• Higher of contact (sexual /casual): Contact with someone with a diagnosis is of SARS within the last 10 days or travel to any
of the region identified by the world health organisation (WHO) as areas with recent level transmission of SARS.
• Clinical criteria – of SARS –COV diagnosis rarely illness: -chills and rigors, myalgia, Malaise, Rhinorrhea or coryza,Arthalgia
,diarrhoea ,sore throat[25],[26]
• Mild to moderate illness: - temperature of greater (greater than 38 degree plus) indications of lower respiratory tract infections
(cough, dyspnea) [7]
LABORATORY TESTS
The laboratory tests confirmed SARS are listed below [28],[29],[30]. Tested positive for SARS based on one of approved tests [ELISA
–(enzyme linked immunosorbant assay) , IFA – (Immunofluorescence ) (or) PCR test – (polymerase chain reaction , Antibody ,
cell culture).
ANTIBODY TESTS
There tests detect antibodies produced in response to the SARS coronavirus infection different type of antibodies (IgM&IgG )
appear & change in level during the course of infection they can be undetectable at the early stage of infection
ELISA TESTS
A test detecting a mixture of IgM&IgG antibodies in the serum of SARS patients yields positive results at around day 4 after the
onset of illness IFA – A set detecting positive results after day 10 of illness.
PREVENTION
There is no vaccine for SARS , only way to control the infection by diagnosis & isolating them & quarantine remain the most
effective means to prevent the spread of SARS and giving supportive treatment to the infected persons .
CONTAINMENT MEASURES
Promote detection of cases through good surveillance network including early warning system .
• Isolation of suspected cases with good control using barrier nursing techniques in health care institute .
• Backward tracing to identify the source of infection & forward tracing to identify contacts that may developed disease .
• Voluntary quarantine for 10 days for suspected contacts.
• Exit screening for outgoing passengers from area with recent local transmission by asking question & temperature
measurement & similar for incoming passengers .
• Quarantine for those who arrived from the area with local transmission.
• Encourage physical distancing arranging seating in waiting rooms so patients can sit at least 6 feet apart .
• Minimize the chance of transmission o SARS virus .
• This prevention includes earlier detection of disease isolation of people who are infected & use of personal protective
equipment (PPE) .an 2017 meta –analysis found that for medical professional wearing N-95 mask could reduce chance of
getting sick up to 80% when compared to no mask .
• Screening process in place at airports to monitor air travel to & from affected countries .
• SARS –COV is most infectious in severely all patients which usually occurs during the 2nd week of illness, this delayed
infectious period meant , so quarantine was highly effective[33],[34],[35]
Eye protection – put on eye protection (i.e.,goggles (or) a face shield that covers the front & sides of the face) upon entry to the
patient room (or) care area if not already wearing as part of extended use [36] .
TREATMENT
ANTIBIOTIC
During the 2002 -2003 outbreak of SARS cases were usually treated initially with broad spectrum antibacterial drugs which are
effective against typical bacterial causes acute community acquired pneumonia. [37]
The administration of broad spectrum antibiotic. -eg :fluroquinolones ,
2nd generation – cephalosporins ,
3rd generation – cephalosporins macrolide is recommended at the first s of sign of SARS
But there is no evidence that antibiotics are clinically beneficial in the treatment of SARS .
ANTIVIRAL DRUG
Ribavirin : - It is a synthetic nucleoside with broad spectrum antiviral activity clinical studies that have assessed the effectiveness
of ribavirin in SARS range from anecdotal case reports is retrospective case series to one randomised clinical trial with multiple
treatment arms none of these studies definitively determine whether (or) not ribavirin is effective against SARS studies describe
clinical ad radiological improvements in patients treated with ribavirin & steroids [38] .
Involving multiple different treatment arms suggest that ribavirin given at a low dose (400 -600 mg /day ) was less effective
compared with an early & aggressive use of steroids with interferon alpha.
Side effect has been associated with ribavirin , 110 people were treated with ribavirin 61% of these had evidence of haemolytic
anaemia , hypocalcemia&hypomagnesaemia were reported in 58% & 46% of people respectively .
Niclosamide: - wu & colleagues screened a set of marketed drugs that were not registered as antiviral but used to determine
actively against SARS . they found that niclosamide an existing anthelmintic drug was able to inhibit replication of the SARS
corona virus[39],[40] .
The treatment of SARS is mainly supportive with antipyretics , supplemental oxygen & to mechanical ventilation as needed .
There is currently no proven antiviral therapy including ribavirin,lopinavir,ritonavir , type 1-interferon , that have thus far shown
no contribution to the disease course.
Administration of corticosteroids is recommended by the british thoracic society/british infections society in patients with severe
disease & O2 saturation of less than 90% .And some more medication were also used such as viral binding inhibitors, fusion
inhibitors , RNA interference, glyrrhizin,nitric oxide , steroids[41] .
IMMUNICATION
Because most patients develop antibodies against SARS corona virus & survive the disease passive &active immunization are
viewed as possible effective means to prevents (or) treat SARS.
VACCINE DEVELOPMENT
Vaccine development is never easy and fast, a lot has to be done to ensure that an efficacious and safe vaccine reaches the public.
With this new coronavirus it is especially challenging since there are no existing vaccines, but the rapid response of researchers
has aided the process. The causative agent of COVID-19 was identified in record time and the genomic sequence of the virus was
swiftly made available aiding the development of potential therapeutics and vaccines. Also, data from studies on SARS-CoV and
MERS-CoV vaccines showed that the spike protein is an ideal target for a vaccine, as antibodies targeting the spike protein
interfered with virus binding and neutralized the virus and the structure of SARS-CoV-2 has already been solved. The SARS-
CoV-2 vaccine will have to overcome numerous issues, like the waning of the antibody response, as antibody titers of SARSCoV
waned after 2-3 years, which could be dangerous if the virus becomes endemic with recurrent outbreaks. Also, higher titers of
neutralizing antibodies will be necessary since older individuals are more affected and they are more immunosenescent. As
SARS-CoV neutralizing antibodies can cross-react with SARSCOV-2, SARS-CoV-1 vaccines might cross-protect against
SARSCoV-2, but these vaccines were not developed further than phase I clinical trials and are not available for use. The Coalition
for Epidemic Preparedness Innovations has given funds to several prospective vaccine developers one of whom has started phase I
clinical trials. This is an mRNA-based vaccine which expresses the stabilized spike protein of the virus in vivo. First participant
has already been dosed with the vaccine and a total of 45 healthy adults will be enrolled in this trial. Several vaccine candidates
are still in the preclinical phase, such as recombinant protein based, viral vector based, DNA and live attenuated vaccines.
Currently developed vaccine against SAR-COVID 2.
• Comirnaty (BNT162b2) is a mRNA-based vaccine
• Moderna COVID‑19 Vaccine (mRNA-1273) is a mRNA-based vaccine
• COVID-19 Vaccine AstraZeneca (AZD1222); also known as Vaxzevria and Covishield is a Adenovirus vaccine
• Sputnik V is a Recombinant adenovirus vaccine (rAd26 and rAd5)
• Sputnik Light is a Recombinant adenovirus vaccine (rAd26)
• COVID-19 Vaccine Janssen (JNJ-78436735; Ad26.COV2.S) is a Non-replicating viral vector
• CoronaVac is a Inactivated vaccine (formalin with alum adjuvant)
• BBIBP-CorV is a Inactivated vaccines.
• The currently developing vaccines are status mention in figure (2)
vaccine status
7% 16%
pre-clinical
41%
36% phase 1
phase 2
phase 3
CONCLUSION
With this review, we summarize that the disease profile of SARS-COVID-2 potent and continues to rapidly evolve. Still now we
have not known answers for many questions arising about SARS-COVID-2 as it is evident that through this review, as more and
more suspected cases of SARS-COVID-2 infection arises, crisis of medication and threatening of people life is also increase in
day to day. we demonstrate that the diagnosis of infection by RT-PCR kits and CT-imaging of chest. The progression of lungs
changes of covid-19 on CT-imaging is also resemble to SARS, with the ground state and consolidation getting worsen over
several days by mortality rate around 33% based on number of confirmed cases and death. Notwithstanding, our study continues
to add knowledge about the disease in a growing number of outbreaks in serious condition.
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