Enzymatic Processing in Microfluidic Reactors
Enzymatic Processing in Microfluidic Reactors
1
Nanotechnology Research Institute, National Institute of Advanced Industrial
Science and Technology (AIST), Tosu, Saga 841-0052, Japan; 2Department of
Molecular and Material Science, Interdisciplinary Graduate School of Engineering
Sciences, Kyushu University, Kasuga, Fukuoka 816-8580, Japan; 3CREST, Japan
Science and Technology Agency, Kawaguchi, Saitama 332-0012 , Japan
Abstract
Abbreviations: NTA, N,N-bis(carboxymethyl)glycine, which binds Nickel (II) ion, and usually applied
for identification/purification of histidine tag of the engineered enzyme molecule; LIGA, Lithography,
Electroplating, and Molding; PEEK, poly(ether ether ketone).
406 M. Miyazaki et al.
Introduction
Fundamentals of microreactors
For newcomers of the microfluidic reaction techniques, we would like to start our
review with a brief introduction. Microfluidic reaction occurs in a small space within
the reaction apparatus. Continuous-flow system is mainly employed; in most cases
mechanical pumping, commonly by syringe pumping, or electroosmotic flow, which
is the motion of ions in a solvent environment through very narrow channels, where an
Enzymatic processing in microfluidic reactors 407
applied potential across the channels cause the ion migration, are used as the driving
force of the reaction system. The microreaction devices that have been developed
so far, can be classified into two types, chip-type microreactors and microcapillary
devices. Chip-type microreactors offer several advantages including easy control
of microfluidics, and integration of many processes into one reaction device. Chip-
type microreactors have been mainly used for the development of bioanalytical
devices. Manufacturing process of such devices are adaptations mainly from the
microelectronics industry. Dry-or wet-etching processes have been used for creating
channels on a silicone or glass plates. Polymer-based materials can be used for
preparation of enzyme microreactors because most of enzyme reactions have been
performed in aqueous solution, especially for bioanalytical use. Polydimethylsiloxane
(PDMS), polymethylmarthacrylate (PMMA), polycarbonate, and Teflon have been
used for preparation of microreaction devices. These plates could be processed by
photolithography, soft lithography, injection molding, embossing, and micromachining
with laser or microdrilling. The LIGA (Lithographie Garbanoforming Abforming; see
Abbreviations) process which consists of a combination of lithography, electrochemical
technology and molding, can also be used for the production of microreactors.
In a microreactor, stable formation of laminar streams of different solutions is
sometimes required although some cases require better mixing by disrupting laminar
streams. Methods for stabilizing multiple laminar flows and micromixing have been
developed. Tokeshi et al developed guide structures at the bottom of microchannel
(Tokeshi et al., 2002). The structures were prepared by wet etching of a glass plate.
A laminar stream of organic solvent and water in this microchannel was stabilized by
these guide structures. Partial surface modification techniques of microchannels has
also been developed. This technique takes advantage of the different surface properties.
Organic solvent prefers hydrophobic regions, whereas aqueous solution goes with
hydrophilic regions. Modification of glass by octadesylsilane was used to stabilize the
flow of organic solvent and aqueous solutions (Hibara et al., 2002). In another study,
UV-sensitive self-assembled monolayer with fluorous chain was used for preparing
partially-modified microchannel surface (Zhao et al., 2002). Our laboratory developed
another method to stabilize solutions (Yamaguchi et al., 2005). Microchannel was
fabricated on both bottom and top plates. Microchannel of one of the two plates was
coated with gold, then treated with alkanethiol to produce a hydrophobic surface. The
resulting microreactor, which forms an upside-down laminar stream, was not only
stabilized by interaction with a surface, but also supported by gravity. Overall, such
partial modification methods are useful for stabilizing laminar streams under pressure
below the critical value. Indeed, the microfluidic phenomenon of laminar flow is one
important aspect in the development of chip-type microreactors.
Micromixers which enhance mixing of two or more different solutions in microspace
have also been constructed. Rapid mixing in microfluidics is difficult to achieve
because under laminar flow mixing of fluids is principally limited to diffusion through
the interface. Several micromixers have been developed by adding devices or materials
in the microchannel, such as electrokinetical mixing (Erickson and Li 2002) and
microbeads (Seong and Crooks 2002). Various types of micromixers which only
require structured microchannels have also been developed. These include a chaotic
mixer with oriented ridges at the bottom of microchannel (Strook et al., 2002), repeated
dividing and merging of fluid (Kim et al., 2002), zig-zag microchannel (Mengeaud et
408 M. Miyazaki et al.
al., 2002), and simple 32 layers in which two solutions are divided into 16 streams and
converge to form 32 layers (Yamaguchi 2003). However, the design and fabrication
of highly efficient micromixers for effective functioning of microfluidic devices are
still desired. The other type of microreaction device consists of a microcapillary. This
is the simplest method which does not require any control of microfluidics, rather,
it uses a microchannel as the reaction space. The major advantage of this type of
microreactor is in scaling up processes which can be achieved by bundling together
microcapillaries. Gas or liquid chromatography parts are mainly used to prepare
this type of microreactor. Capillary type microreactors are mainly used to develop
manufacturing processes, especially catalytic reactions, to take advantage of the large
surface area.
STOPPED-FLOW REACTION
Microreactors have been examined not only in the continuous-flow mode but also in the
stopped-flow mode of operation. Kitamori and coworkers have described stopped-flow
microreactor devices using glass microchips with Y-shaped channels. The stopped-flow
procedure involves mobilization of reagents through such a device for a designated
period of time using an applied chemical and/or pumped field. The flow is subsequently
paused by the removal of the applied field before re-application of the field. Results
from experiments utilizing the stopped-flow mode have reported an acceleration of
peroxidase-catalyzed reactions (Tanaka et al., 2001)). Such observed increases in the
reaction rates using the stopped-flow technique has been attributed to an effective
increase in residence time within the device corresponding to the different kinetics
associated with these reactions. Stopped-flow microreaction systems with IR heating
has also been developed (Tanaka et al., 2000). The system enables non-contact partial
heating of the reaction solution. Peroxidase-catalyzed reactions have been performed
in a cooled chip equipped with an IR diode laser. The rate of the enzyme reaction
Enzymatic processing in microfluidic reactors 409
which was initially inhibited due to cooling of the chip to lower the temperature was
increased by non-contact heating by utilizing through photothermal effect produced by
a diode laser. Their findings suggest the possibility of controlling nanoscale reactions
and the precise synthesis of substances by photothermal stimulation.
A multiplex enzyme assay with several simultaneous enzymatic reactions has been
performed in an electrophoretic microreaction device (Xue et al., 2001). The resolving
power of electrophoresis enables several enzyme assays to be analyzed at high speed.
Not only can the activities of individual enzyme catalysts be determined independently
of other enzymes but the effects of inhibitors can also be analyzed. This approach
enables high throughput analysis on a microchip.
A centrifugal microchip that utilizes a CD player-like apparatus has also been
described (Lai et al., 2004). This microreactor does not require the usual pumping
system, rather centrifugal and capillary forces are used. This method has been applied
to an enzyme-linked immunosorbent assay (ELISA), with each step of the ELISA
process carried out by controlling the rotation speed. This method may be useful
for the development of analytical microbioreaction systems for multiple analyses of
single samples.
Numerical simulation is a strong tool to understand fluid flow and chemical
reactions within microchannels. This technique has also been applied to understand
the mechanism of enzyme reactions in a microchannel (Sotowa et al., 2008). Such
investigations will disclose the mechanism of improved efficiency of enzyme reactions
in a microfluidic format.
Technique Media Immobilization method Immobilized enzyme Advantage and disadvantage Ref.
coated beads were used) • Glucose oxidase • Enables multistep reaction Crooks 2002
• Biotin-label is required
• Pressure gain
Agarose Complex formation (Ni-NTA • Bacterial P450 • Ease in preparation Srinivasan et al.
and His-tag) • Applicable for engineered enzymes 2004
• Higher pressure by increasing flow rate and
particles may be crushed
Polystylene Complex formation (Ni-NTA • Benzaldehyde liase • Ease in preparation Drager et al. 2007
and His-tag) • p-Nitrobenzyl esterase • Applicable for engineered enzymes
• Higher pressure by increasing flow rate and
particles may be crushed
Magnetic bead Cross-linking • Glucose oxidase • Preparation is easy Nomura et al.
(3-aminopropylsilane/ • Trypsin • Enzyme can be immobilized on any place 2004
glutaraldehyde) by placing a magnet Li et al. 2007
• Amount of enzyme particle is limited because
of plugging
Polymer monolith Entrapment(2-vinyl-4,4- • Trypsin • Stablization of enzyme structure and activity Sakai-Kato et al
dimethylazlactone, • Requirement of skill in preparation 2004
ethylenedimethacrylate, • Denaturation during entrapment process
2-hydroxyethyl methacrylate,
acrylamide)
Table 1. Contd.
Technique Media Immobilization method Immobilized enzyme Advantage and disadvantage Ref.
Silica monolith Entrapment within porous • Trypsin • Stablization of enzyme structure and activity Sakai-Katoet al.
silica • Protease P • Compatibility in organic solvent 2003
• Requirement of skill in preparation Kawakami et al
• Denaturation possible during entrapment process 2005, 2007
Aluminium oxide Cross-linking • Horseradish peroxidase • Large surface area due to porous nature Heule et al. 2003
(3-aminopropylsilane/ • Applicable for heterogeneous reactions
glutaraldehyde) • Complicated preparation
• Not applicable for large-scale processing
Surface SiO2 surface Physical adsorption of • Alkakine phosphatase • Ease in preparation Gleason and
modification biotinylated poly-lysine • Requirement for avidin- conjugation Carbeck 2004
/biotin-avidin • Possible occurrence of detachment
PDMS Physical adsorption of lipid • Alkakine phosphatase • Enable immobilization of enzyme on Mao et al. 2002
(O2 Plasma treated) bilayer/biotin-avidin plastic surface
• Possible occurrence of detachment
• Expensive reagents
• Requirement for avidin- conjugation
PDMS Physical adsorption of • Alkaline phosphatase • Enable partial modification of microchannel Holden et al 2004
fibrinogen/Photochemmical • Special equipment is required
reaction of Fluorescein- biotin
Slilicon Cross-linking • Trypsin • Simple operation Eckstron et al.
(3-aminopropylsilane/ • Difficulty in channel preparation 2000
glutaraldehyde) • Poor reproducibility
Fused silica Cross-linking • Cucumisin • Simple operation Miyazaki et al
(Sol-gel modified) (3-aminopropylsilane/ • Lipase • Immobilize ~10 times more enzymes than single 2003, 2004,
succinate) • L-Lactic dehydrogenase layer immobilization and therefore, performs 2005
Enzymatic processing in microfluidic reactors
Technique Media Immobilization method Immobilized enzyme Advantage and disadvantage Ref.
• Need several steps for immobilization
• Reproducibility strongly affected by characteristics
of silica surface
PMMA Cross-linking • Trypsin • Stabilize enzyme under denaturation condition Qu et al 2004
[modified with butyl (Si-O bond between • Complicated preparation method
methacrylate/γ- methyl- modified surface and
acryloxy) propyltrimeth- silica monolyth)
M. Miyazaki et al.
oxysilicane]
PDMS Cross-linking • Trypsin • Stabilizes enzyme under denaturation condition Wu et al 2004
(O2 Plasma treated) (Si-O-Ti or Si-O-Al bond • Complicated preparation method
between titania or alumina
monolyth)
Fused silica Cross-linking between • Lipase • Much larger surface area (1.5 times greater than Nakamura et al
physically- immobilized sol-gel modified surface) and higher efficiency 2004
Silica particle • Complicated preparation method
(3-aminopropylsilane/ • Unstable withed physical force (bending etc.)
succinate)
Silicon rubber Cross-linking • Thermophilic β- • Reaction can be performed at 80oC Thomsen et al.
(3-aminopropyltrieth- glycosidase • Complicated preparation method 2007
oxysilane and glutaraldehyde) • Reaction is slow because not much enzyme
can be immobilized
Photopatterning onto Cross-linking by photo- • Horseradish peroxidase • Reduced non-specific absorption Logan et al. 2007
PEG-grafted surface patterned vinylazlactone • Glucose oxidase • Sequentially multistep reaction could be achieved
• Requires special equipment
PDMS Entrapment within hydrogel • Alkaline phosphatase • Quite fast reaction (90% conversion at Koh and Psiko
formed on surface • Urease 10 min reaction) 2005
• Immobilization of multiple enzyme
• Complicated preparation method
• Not applicable for higher flow rate
Technique Media Immobilization method Immobilized enzyme Advantage and disadvantage Ref.
Membrane PDMS/Glass Place PVDF membrane that • Trypsin • Easy preparation Gao et al. 2001
adsorbs enzymes • Less efficiency
• Possibility of leakage at higher flow rate
Glass Covalent cross-linking with • Horseradish peroxidase • Integration of membrane permeation and Hisamoto et al.
Nylon membrane formed at enzyme reaction 2003
liquid-liquid interface • Preparation of multiple membrane
(glutaraldehyde) • Complicated preparation method
• Unstable membrane at higher flow rate
PTFE Enzyme-embedded • α-Chimotrypsin • Easy preparation Honda et al.
membrane formation using • Trypsin • Durable (>40days) 2005, 2006, 2007
glutaraldehyde/ • α-Aminoacylase • Applicable in organic solvents
paraformaldehyde • Other various enzymes • Almost all enzymes can be immobilized by
adding poly-Lys
Enzymatic processing in microfluidic reactors
413
414 M. Miyazaki et al.
Figure 1. Images of immobilization technique for micro enzyme reactor The enzyme can be easily
immobilized by trapping enzyme-immobilized polystylene beads within the microchannel (a). Modified
surfaces are also useful for enzyme immobilization. Modified surface obtained by sol-gel technique (b),
functionalized microstructure fabricated from silicone rubber (c), nanoparticle arrangement (d), and
hydrogel formation (e). Membrane formed within the microchannel can also be used as support for enzyme
immobilization. Nylon membrane formed at liquid-liquid interface (f) or membrane of cross-linking enzyme
aggregate formed at microchannel surface (g) was used for immobilization. These images were reproduced
with permissions from (a) Seong and Crooks (2002), (b) Miyazaki et al. (2003), (c) Thomsen et al. (2007),
(d) Wang et al. (2002), (e) Koh and Pishko (2005), (f) Hisamoto et al. (2003), (g) Honda et al. (2005).
Enzymatic processing in microfluidic reactors 415
Methods for enzyme immobilization on the microchannel surface have also been
developed because they can take advantage of the larger surface area of microreaction
systems without gaining pressure. Physical immobilization is an easy way to immobilize
molecules. In microchannel systems, a biotin-avidin system has been mainly used to
immobilize enzymes. The biotinylated polylysine was physically immobilized onto
a glass surface to immobilize streptavidin-conjugated alkakine phosphatase (Gleason
and Carbeck 2004). This microreactor was used for rapid determination of enzyme
kinetics. A biotinylated lipid bilayer (Mao et al., 2002) and partial biotinylation by
photo patterning on fibrinogen (Holden et al., 2004) were also used for immobilization.
However, these methods are not suitable for long-term use because of their instability.
Also, applications are limited to streptavidin-conjugated enzymes.
The introduction of a functional group on the microchannel surface was used
for covalent cross-linking. A trypsin-immobilized microreactor was prepared by
modification with 3-aminopropylsilane and glutaraldehyde using the classical method
(Eckstrom et al., 2000). Although this immobilization method is easy, fabrication of a
416 M. Miyazaki et al.
MEMBRANE-FORMATION
H H H CH3
H O HO H
NO2 O HN O
HO H OH H OH
H H H
H HO
H H O H
HO O OH
O
HO H NH
H H
OHHO
O CH3 H
O HO
H H
O
HO H OH
H OH
H H
H
O H O
NH
H3C H
OH
Benzoin reaction Ni-NTA • Benzaldehyde • >80% yields were obtained Drager et al.
O agarose bead liase 2007
H H R
+ R immobilization • p-Nitrobenzyl
O O OH
esterase
Regioselective hydrolysis
Enzymatic processing in microfluidic reactors
O O O
OAc OAc HO
+
OAc HO HO
OAc OH OH
419
Table 2. Contd.
420
HO O H3C O O
Silica monolith • Lipase • Optical resolution of products Kawakami et al.
entrapped within was achieved by connecting 2007
O
microchannels commercially available chiral
O CH3
H3C O O column
O
O
OH Aqueous phase
and poly-Lys
H2N
O
Enzymatic processing in microfluidic reactors
421
422 M. Miyazaki et al.
Concluding remarks
Acknowledgments
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