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CELL AND MOLECULAR BIOLOGY
TOPIC 1: Cell, Basic Structure of All Living Creatures
The Cell Theory
   1. All organisms are made of one or more cells.
   2. The cell is the basic unit of all living things
   3. All cells come from existing cells.
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       Name              Memorable phase                  Description
 Plasma membrane         Cell’s fortification    Separates the interior of the
                                                 cell from the outside
                                                 environment
     Cytoplasm          Cell’s environment       Fluid part enclosed by the
                                                 membrane, contains
                                                 organelles
      Nucleus               Cell’s brain         Contains most of the genetic
                                                 material , in the form of DNA
Endoplasmic reticulum    Cell’s pipe system      Smooth ER- System of
                                                 metabolic processes
                                                 Rough ER- Protein
                                                 manufacturing ribosomes
   Golgi apparatus      Cell’s delivery center   It tags vesicles and proteins to
                                                 help them get carried to their
                                                 destinations
    Centrosome             Cell’s anchor         Organizes and produces the
                                                 microtubules of the cell’s
                                                 cytoskeleton
    Mitochondria         Cell’s powerplant       Produce energy for the cell,
                                                 break down carbohydrates
                                                 and some durations lipids to
                                                 form molecule ATP
     Ribosome              Cell’s factories      Translate RNA into proteins
     Lysosome              Cell’s stomach        Vesicles filled with digestive
                                                 proteins can absorb
                                                 something and break it down
                                                 into recyclable pieces
     Peroxisome            Cell’s firemen        Vesicles that defend (or
                                                 neutralize) the cell from free
                                                 radicals
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          Cytoskeleton             Cell’s shapeshifter       It modifies the cell’s shape
                                                             and ensures mechanical
                                                             resistance
            Vacuole               Cell’s compartments        Enclosed storage vessels
                                                             which are filled with water
                                                             containing inorganic and
                                                             organic molecules
Anatomy of Human Cells
      Red Blood cells
      Ovum Cell
      Nerve cell
      Columnar epithelial cell
      Smooth muscle cell
      Bone cell
      Sperm Cell
Kinds of cells:                                  -   Eukaryota, whose members are known as
                                                     eukaryotes, is a device domain of organisms
A. Eukaryotic cell
                                                     whose cells have a nuclues.
                                                 -   All animals, plants, fungi and many
                                                     unicellular organisms, are eukaryotes. they
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    belong to the group of organisms                Structure of Eukaryotic Cell
    eukaryota or eukarya, which is one of the
                                                        Plasma Membrane
    three domains of life.
-   defined as cells containing organized           •   The plasma membrane separates the cell
    nucleus and organelles which are enveloped          from the outside environment.
    by membrane-bound organelles.                   •   It comprises specific embedded proteins,
-   Examples of eukaryotic cells are plants,            which help in the exchange of substances in
    animals, protists, fungi. Their genetic             and out of the cell.
    material is organized in chromosomes.
-   Eukaryotic cells have a nucleus enclosed
    within the nuclear membrane and form
    large and complex organisms. Protozoa,
    fungi, plants, and animals all have
    eukaryotic cells. They are classified under
                                                        Cell Wall
    the kingdom Eukaryota.
-   They can maintain different environments in         •   A cell wall is a rigid structure present
    a single cell that allows them to carry out             outside the plant cell. It is, however,
    various metabolic reactions. This helps them            absent in animal cells.
    grow many times larger than the                     •   It provides shape to the cell and helps in
    prokaryotic cells.                                      cell-to-cell interaction.
                                                        •   It is a protective layer that protects the
                                                            cell from any injury or pathogen attacks.
                                                        •   It is composed of cellulose,
                                                            hemicellulose, pectins, proteins, etc.
Characteristics of Eukaryotic Cells
                                                        Cytoskeleton
   The features of eukaryotic cells are as
    follows:                                            •   The cytoskeleton is present inside the
   Eukaryotic cells have the nucleus enclosed              cytoplasm, which consists of
    within the nuclear membrane.                            microfilaments, microtubules, and fibres
   The cell has mitochondria.                              to provide perfect shape to the cell,
   Flagella and cilia are the locomotory organs            anchor the organelles, and stimulate the
    in a eukaryotic cell.                                   cell movement.
   A cell wall is the outermost layer of the
                                                        Endoplasmic Reticulum
    eukaryotic cells.
   The cells divide by a process called mitosis.       •   It is a network of small, tubular
   The eukaryotic cells contain a cytoskeletal             structures that divides the cell surface
    structure.                                              into two parts: luminal and extraluminal.
   The nucleus contains a single, linear DNA,              Endoplasmic Reticulum is of two types:
    which carries all the genetic information.          •   Rough Endoplasmic Reticulum contains
                                                            ribosomes.
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•   Smooth Endoplasmic Reticulum that           •   They are known as “suicidal bags”
    lacks ribosomes and is therefore smooth         because they possess hydrolytic
                                                    enzymes to digest protein, lipids,
                                                    carbohydrates, and nucleic acids.
Nucleus                                         Plastids
                                                • These are double-membraned structures
•   The nucleoplasm enclosed within the
                                                   and are found only in plant cells. These
    nucleus contains DNA and proteins.
                                                   are of three types:
•   The nuclear envelop consists of two
                                                • Chloroplast that contains chlorophyll
    layers- the outer membrane and the
                                                   and is involved in photosynthesis.
    inner membrane. Both the membranes
                                                • Chromoplast that contains a pigment
    are permeable to ions, molecules, and
                                                   called carotene that provides the plants
    RNA material.
                                                   yellow, red, or orange colours.
    Ribosome production also takes place
                                                • Leucoplasts that are colourless and store
    inside the nucleus.
                                                   oil, fats, carbohydrates, or proteins.
Golgi Apparatus
                                                Examples of Eukaryotic Cells
•   It is made up of flat disc-shaped
    structures called cisternae.                •   Eukaryotic cells are exclusively found in
•   It is absent in red blood cells of humans       plants, animals, fungi, protozoa, and
    and sieve cells of plants.                      other complex organisms. The examples
•   They are arranged parallel and                  of eukaryotic cells are
    concentrically near the nucleus.
•   It is an important site for the formation
    of glycoproteins and glycolipids.
                                                Plant Cells
Ribosomes
                                                •   The cell wall is made up of cellulose,
    These are the main site for protein
                                                    which provides support to the plant. It
    synthesis and are composed of proteins
                                                    has a large vacuole which maintains the
    and ribonucleic acids.
                                                    turgor pressure. The plant cell contains
Mitochondria                                        chloroplast, which aids in the process of
                                                    photosynthesis.
•   These are also known as “powerhouse
    of cells” because they produce energy.      Fungal Cells
•   It consists of an outer membrane and an
                                                •   The cell wall is made of chitin. Some
    inner membrane. The inner membrane is
                                                    fungi have holes known as septa which
    divided into folds called cristae.
                                                    allow the organelles and cytoplasm to
•   They help in the regulation of cell
                                                    pass through them.
    metabolism.
                                                Animal Cells
Lysosomes
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    •   These do not have cell walls. Instead,        4. The histone proteins, the important
        they have a cell membrane. That is why           constituents of eukaryotic
        animals have varied shapes. They have            chromosomes, are lacking in them.
        the ability to perform phagocytosis and       5. The cell wall is made up of
        pinocytosis.                                     carbohydrates and amino acids.
                                                      6. The plasma membrane acts as the
    Protozoa
                                                         mitochondrial membrane carrying
    •   Protozoans are unicellular organisms.            respiratory enzymes.
        Some protozoa have cilia for                  7. They divide asexually by binary fission.
        locomotion. A thin layer called pellicle         The sexual mode of reproduction
        provides supports to the cell.                   involves conjugation.
                                                   Prokaryotic Cell Structure
                                                      A prokaryotic cell does not have a nuclear
                                                      membrane. However, the genetic material is
                                                      present in a region in the cytoplasm known
                                                      as the nucleoid. They may be spherical, rod-
                                                      shaped, or spiral. A prokaryotic cell
B. Prokaryotic cell
                                                      structure is as follows:
- lack both, a well-defined nuclues and
   membrane- bound cell organelles. Examples          •   Capsule– It is an outer protective
   of prokaryotes are blue-green algae,                   covering found in the bacterial cells, in
   bacteria and mycoplasma, among                         addition to the cell wall. It helps in
   prokaryotes, bacteria are the most common              moisture retention, protects the cell
   and multiply very fast.                                when engulfed, and helps in the
                                                          attachment of cells to nutrients and
-   is a type of cell that does not have a true
                                                          surfaces.
    nucleus or membrane-bound organelles.
    Organisms within the domains Bacteria and         •   Cell Wall– It is the outermost layer of
    Archaea are based on the prokaryotic cell.            the cell which gives shape to the cell.
-   A prokaryotic cell consists of a single           •   Cytoplasm– The cytoplasm is mainly
    membrane and therefore, all the reactions             composed of enzymes, salts, cell
    occur within the cytoplasm. They can be               organelles and is a gel-like component.
    free-living or parasites.
                                                      •   Cell Membrane– This layer surrounds
Characteristics of Prokaryotic Cell                       the cytoplasm and regulates the entry
                                                          and exit of substances in the cells.
    1. They lack a nuclear membrane.
    2. Mitochondria, Golgi bodies, chloroplast,       •   Pili– These are hair-like outgrowths that
       and lysosomes are absent.                          attach to the surface of other bacterial
    3. The genetic material is present on a               cells.
       single chromosome.
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   •   Flagella– These are long structures in          •   Plasmids– Plasmids are non-
       the form of a whip, that help in the                chromosomal DNA structures. These are
       locomotion of a cell.                               not involved in reproduction.
   •   Ribosomes– These are involved in                •   Nucleoid Region– It is the region in the
       protein synthesis.                                  cytoplasm where the genetic material is
                                                           present.
Components of Prokaryotic Cells
     The prokaryotic cells have four main
components
       1. Plasma Membrane - It is an outer
          protective covering of phospholipid
          molecules which separates the cell
          from the surrounding environment.         Reproduction in Prokaryotes
       2. Cytoplasm- It is a jelly-like substance
          present inside the cell. All the cell     A. Asexually by binary fission
          organelles are suspended in it.                 Binary Fission
       3. DNA- It is the genetic material of the             • The DNA of an organism
          cell. All the prokaryotes possess a                    replicates and the new copies
          circular DNA. It directs what proteins                 attach to the cell membrane.
          the cell creates. It also regulates the            • The cell wall starts increasing in
          actions of the cell.                                   size and starts moving inwards.
       4. Ribosomes- Protein synthesis occurs                • A cell wall is then formed
          here.                                                  between each DNA, dividing the
                                                                 cell into two daughter cells.
                                                    B. Sexually by conjugation
NOTE: Some prokaryotic cells possess cilia and
flagella which helps in locomotion.
        A prokaryotic cell lacks certain
                                                    Examples of Prokaryotic Cells
    organelles like mitochondria, endoplasmic
    reticulum, and Golgi bodies.                    A. Bacterial Cells
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      •   These are unicellular organisms               The prokaryotic cell structure is
          found everywhere on earth from soil           composed of:
          to the human body.
                                                           • Cell wall
      •   They have different shapes and
                                                           • Cell membrane
          structures.
                                                           • Capsule
      •   The cell wall is composed of
                                                           • Pili
          peptidoglycan that provides
                                                           • Flagella
          structure to the cell wall.
                                                           • Ribosomes
      •   Bacteria have some unique structures
                                                           • Plasmids
          such as pili, flagella and capsule.
                                                 How is the prokaryotic cell structure
      •   They also possess extrachromosomal
                                                 different from that of the eukaryotic cell?
          DNA known as plasmids.
      •   They have the ability to form tough,   Prokaryotic cells lack a true nucleus. The
          dormant structures known as            nucleus is devoid of the nuclear membrane. On
          endospores that helps them to          the contrary, the nucleus of the eukaryotic cells
          survive under unfavourable             is enclosed by a nuclear membrane. A
          conditions. The endospores become      prokaryotic cell also lacks mitochondria and
          active when the conditions are         chloroplast, unlike a eukaryotic cell.
          favourable again.
                                                 How does a prokaryotic cell divide?
                                                 Prokaryotic cells undergo asexual reproduction.
B. Archaeal Cells                                Most prokaryotic cells divide by binary fission,
         • Archaebacteria are unicellular        where the cells divide into two daughter cells.
            organisms similar to bacteria in
                                                 Why is the process of cell division in
            shape and size.
                                                 prokaryotic cells different from that in
         • They are found in extreme
                                                 eukaryotes?
            environments such as hot springs
            and other places such as soil,       Prokaryotic cells are simpler than eukaryotic
            marshes, and even inside humans.     cells. They do not have a nuclear membrane
         • They have a cell wall and flagella.   surrounding their DNA, therefore, cell division
            The cell wall of archaea does not    is different than that in eukaryotes.
            contain peptidoglycan.
                                                 When did the prokaryotic cells evolve?
         • The membranes of the archaea
            have different lipids with a         The first prokaryotic cells evolved around 3.5
            completely different                 billion years ago. The eukaryotic cells were
            stereochemistry.                     formed after the prokaryotic cells and are
         • Just like bacteria, archaea have      believed to have evolved from them.
            one circular chromosome. They
                                                 What are the difference between
            also possess plasmids.
                                                 EUKARYOTIC AND PROKARYOTIC CELLS?
                                                 Prokaryotic cell:
What are the structural features of
prokaryotic cells?
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           1. The cell which lacks a well-defined            Eukaryotic cell:
              nucleus is called prokaryotic cells.                 1. The cell having a well-defined
           2. These cells have a primitive                             nucleus is called a eukaryotic cell.
              organization of genetic material.                    2. It lacks respiratory enzymes.
 Prokaryotic cell                                    Eukaryotic cell
    - The nucleus is not well defined and               - The nuclear region well-defined
       is called the nucleoid.                             nucleus with a nuclear membrane
    - A single length of only                           - Several lengths of genetic material
       deoxyribonucleic acid (DNA)                         (chromosomes) containing DNA
                                                           are wound around certain proteins.
       -    Small ribosomes                             - Larger ribosomes
       -    No other cell organelles                    - Several organelles like
                                                           mitochondria, endoplasmic
                                                           reticulum, chloroplasts, etc
            Examples: Bacteria, Blue- green
            algae (Cyanobacteria)                          Examples: Euglena, Amoeba, and
                                                           all plants and animals
When did the first eukaryotic cell evolve?                   Endosymbiotic theory: - Prokaryotes existed
                                                             first. Eukaryotes evolved from prokaryotes that
   •       The first eukaryotic cells evolved about 2
                                                             begin to live within one another.
           billion years ago. This is explained by the
           endosymbiotic theory that explains the            Proof: Mitochondria & Chloroplasts have their
           origin of eukaryotic cells by the                 own DNA, so they existed independently as
           prokaryotic organisms. Mitochondria               bacteria at one time; this is how eukaryotes
           and chloroplasts are believed to have             evolved from prokaryote ancestors
           evolved from symbiotic bacteria.
                                                             Mitochondria and chloroplast originated as
                                                             bacterial cells that came to live inside larger
                                                             cells
Cell Evolution
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Most membrane-enclosed organelles including            Alongside the three-domain system, there
the nucleus, ER and golgi probably originated          exists a six kingdom system of life, i.e.
from deep folds in the plasma membrane                 Archaebacteria (comprising ancient bacteria),
                                                       Eubacteria (comprising true bacteria), Protista
                                                       (comprising one-celled organisms), Fungi,
Evolution of the Eukaryotic Cell                       Plantae, and Animalia. While Archaebacteria
                                                       and Eubacteria constitute the Archaea and
       ENDOSYMBIOSIS:
                                                       Bacteria domains respectively, Protista, Fungi,
1. Start with two independent bacteria                 Plantae and Animalia together form the
2. One bacterium engulf the other                      Eukaryote domain of life.
3. One bacterium now lives inside the other
4. Both bacteria benefit from the arrangement
5. The internal bacteria are passed on from                • BACTERIA
    generation to generation                           -   A member of a large group of unicellular
                                                           microorganisms which have cell walls but
•   Endosymbiosis theory was proposed by                   lack of organelles and an organized nuclues,
    Lynn Margulis                                          including some that can cause disease.
•   Endosymbiosis theory states that larger            -   Are single-celled organisms that are pretty
    bacterial cells lost their cell walls and              much everywhere: inn the ground, in the
    engulfed smaller bacterial cells                       ocean, on your hand and in your gut. While
•   Eukaryotes come from prokaryotes                       some are harmful, most are not - and some
•   Symbiosis means “living together’”                     are even beneficial to human health. In
                                                           many cases, humans live in symbiosis with
                                                           bacteria, maintaining a mutually beneficial
THREE DOMAINS OF LIFE AND THEIR                            relationship without even knowing it.
CHARACTERISTICS                                        -   are ubiquitous, mostly free-living organisms
                                                           often consisting of one biological cell. They
The three-domain system biological
                                                           constitute a large domain of prokaryotic
classification of life, which classifies life on the
                                                           microorganisms. Typically a few
planet into three different domains – Archaea,
                                                           micrometres in length, bacteria were among
Bacteria and Eukaryote, was put forth by
                                                           the first life forms appear on earth, and are
American microbiologist and physicist Carl
                                                           present in most of its habits.
Woese in 1990.
                                                       -   Even though bacteria are prokaryotic cells
                                                           just like Archaea, their membranes are
                                                           made of unbranched fatty acid chains
                                                           attached to glycerol by ester linkages.
                                                           Cyanobacteria and mycoplasmas are the
                                                           best examples of bacteria.
                                                       -   As they don’t have ether containing
                                                           linkages like Archaea, they are grouped into
                                                           a different category – and hence a different
                                                           domain. There is a great deal of diversity in
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    this domain, such that it is next to                Kingdom Fungi (yeast, mold, etc.), Kingdom
    impossible to determine how many species            Plantae (flowering plants, ferns, etc.) and
    of bacteria exist on the planet.                    Kingdom Animalia (insects, vertebrates,
                                                        etc.).
    • ARCHAEA
-   Archaea are prokaryotic cells which are         -   Not all Eukaryotes have a cell wall, and even
    typically characterized by membranes that           if they do they don’t contain
    are branched hydrocarbon chains attached            peptidoglycan as bacteria do. While cells
    to glycerol by ether linkages. The presence         are organized into tissues in case of
    of this ether containing linkages in Archaea        kingdom Plantae as well as kingdom
    adds to their ability of withstanding extreme       Animalia, the presence of cell walls is only
    temperature and highly acidic conditions.           restricted to the members of kingdom
                                                        Plantae.
              Examples of Archaea
-   Extreme halophiles – organisms which
    thrive in highly salty environment              Each of these three domains recognized by
-   Hyperthermophiles – organisms which             biologists today contain rRNA which is unique
    thrive in extremely hot environment             to them, and this fact in itself forms the basis of
                                                    three-domain system. While the presence of
    • EUKARYA                                       nuclear membrane differentiates the Eukarya
-   As the name suggests, the Eukaryote are         domain from Archaea domain and Bacteria
    eukaryotic cells which have membranes that      domain – both of which lack nuclear
    are pretty similar to that of bacteria.         membrane, the distinct biochemistry and RNA
    Eukaryote are further grouped into              markers differentiate Archaea and Bacteria
    Kingdom Protista (algae, protozoans, etc.),     domains from each other.
                                                    Topic 2:
                                                    MOLECULAR BIOLOGY
                                                        -   is the branch of biology that seeks to
                                                            understand the molecular basis of
                                                            biological activity in and between cells,
                                                            including molecular synthesis,
                                                            modification, mechanisms, and
                                                            interactions.
                                                        -   The study of chemical and physical
                                                            structure of biological macromolecules
                                                        -   coined by an American scientist, Warren
                                                            Weaver in the year 1938.
                                                    BIOMOLECULES
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-   also called biological molecule                  - Form membranes, which separate cells
-   any of numerous substances that are              from their environments and
    produced by cells and living organisms.          compartmentalize the cell interior,
-   Have a wide range of sizes and                   giving rise to organelles, such as
    structures and perform a vast array of           the nucleus and the mitochondrion, in
    functions.                                       higher (more complex) organisms.
The 4 major types of biomolecules             All biomolecules share in common a
                                              fundamental relationship between structure
          carbohydrates 
                                              and function, which is influenced by factors
          lipids 
                                              such as the environment in which a given
          nucleic acids
                                              biomolecule occurs.
          proteins
                                                  Lipids, for example, are hydrophobic
                                                   (“water-fearing”); in water, many
 Nucleic acids, namely DNA and RNA                spontaneously arrange themselves in
         Function: Storing an                      such a way that the hydrophobic ends
  organism’s genetic code—                         of the molecules are protected from the
         Genetic code is the the sequence          water, while the hydrophilic ends are
  of nucleotides that determines                   exposed to the water. This arrangement
  the amino acid sequence of proteins              gives rise to lipid bilayers, or two layers
                                                   of phospholipid molecules, which form
 Protein has 20 different amino acids;            the membranes of cells and organelles.
  the order in which they occur plays a
                                              In another example, DNA, which is a very long
  fundamental role in
                                              molecule—in humans the combined length of
  determining protein structure and
                                              all the DNA molecules in a single cell stretched
  function
                                              end to end would be about 1.8 metres (6 feet),
         Function:
                                              whereas the cell nucleus is about 6 μm (6 10-
  - Transporters, moving nutrients and
                                              6 metre) in diameter—has a highly flexible
  other molecules in and out of cells
                                              helical structure that allows the molecule to
  - Acts as enzymes and catalysts for the
                                              become tightly coiled and looped
  vast majority of chemical reactions that
  take place in living organisms              This structural feature plays a key role in
  - Form antibodies and hormones              enabling DNA to fit in the cell nucleus, where it
  - influence gene activity.                  carries out its function in coding genetic traits.
 Carbohydrates are built from four types
  of sugar units—monosaccharides, disac       MOLECULAR BASIS OF HEREDITY
  charides, oligosaccharides (2-10),
                                                    DNA consists of long chains of
  and polysaccharides(10 or more).
                                                     nucleotides lying parallel to one another.
  Function:
                                                    Each nucleotide has a backbone of
  - source of stored energy
                                                     sugar and phosphate linked to a base.
  - acting as chemical messengers
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       There are four complementary bases in
        DNA: adenine and thymine, which
                                                     What is the structure of DNA?
        always bond together, as do cytosine
        and guanine.                                 A collection of nucleotides makes a DNA
                                                     molecule. Each nucleotide contains three
Molecular basis of inheritance is the study of       components:
genes, hereditary and genetic
variations which explains how an offspring              •   a sugar
looks similar to its maternal or paternal               •   a phosphate group
features. DNA, RNA and genetic code are the             •   a nitrogen base
fundamental parts of the molecular basis of
inheritance and are responsible to transmit          The sugar in DNA is called 2-deoxyribose.
genes from parents to offspring.                     These sugar molecules alternate with the
DNA (Deoxyribonucleic acid)                          phosphate groups, making up the
                                                     “backbone” of the DNA strand.
-   a self-replicating material that is present in
    nearly all living organisms as the main          Each sugar in a nucleotide has a nitrogen base
    constituent of chromosomes. It is the carrier    attached to it. There are four different types of
    of genetic information.                          nitrogen bases in DNA
-   the fundamental and distinctive                     •   adenine (A)
    characteristics or qualities of someone or          •   thymine (T)
    something, especially when regarded as              •   cytosine (C)
    unchangeable                                        •   guanine (G)
-   It contains units of biological building
    blocks called nucleotides.
-   DNA is a vitally important molecule for not
    only humans but also most other
    organisms. DNA contains our hereditary
    material and our genes, the things that
    make us unique.
-
                                                     The two strands of DNA form a 3-D structure
                                                     called a double helix. When illustrated, DNA
                                                     looks like a spiral ladder in which the base
                                                     pairs are the rungs, and the sugar-phosphate
                                                     backbones are the legs.
                                                     Additionally, it’s worth noting that the DNA in
                                                     the nucleus of eukaryotic cells is linear,
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meaning that the ends of each strand are free.
In a prokaryotic cell, the DNA forms a circular   How do you get from the DNA code to a
structure.                                        protein?
                                                  First, the two DNA strands split apart. Then,
DNA Structure                                     special proteins within the nucleus read the
                                                  base pairs on a DNA strand to create an
   -   DNA is a long polymer made up of many      intermediate messenger molecule.
       smaller units called nucleotides
   -   A nucleotide consists of a phosphate       This process creates the messenger molecule
       group, 5 carbon sugar and nitrogenous      RNA (mRNA). mRNA is another type of nucleic
       base                                       acid. It travels outside the nucleus, serving as a
   -   DNA contains 4 nitrogenous bases           message to the cellular machinery that builds
                                                  proteins.
What does DNA do?
DNA contains the instructions that are            In the second step, specialized components of
necessary for an organism to grow, develop,       the cell read the mRNA’s message three base
and reproduce. These instructions exist within    pairs at a time and work to assemble a protein,
the sequence of nucleotide base pairs.            amino acid by amino acid. This process is called
                                                  translation.
DNA helps your body grow
Your cells read this code three bases at a time   DNA damage and mutations
to generate proteins that are essential for       The DNA code is prone to damage. According
growth and survival. The DNA sequence that        to estimates, tens of thousands of DNA
houses the information to make a protein is       damage events occur every day in each of our
called a gene.                                    cells. Damage can occur due to errors in DNA
                                                  replication, free radicals, and exposure to UV
Each group of three bases corresponds to          radiation.
specific amino acids, which are the building
blocks of proteins. For example, the base pairs   Your cells have specialized proteins that can
T-G-G specify the amino acid tryptophan,          detect and repair many cases of DNA damage.
while the base pairs G-G-C specify the amino      There are at least five major DNA repair
acid glycine.                                     pathways.
Some combinations, like T-A-A, T-A-G, and T-      Mutations are permanent changes in the DNA
G-A, also indicate the end of a protein           sequence. Changes in the DNA code can
sequence. This tells the cell not to add more     negatively impact how the body produces
amino acids to the protein.                       proteins.
Proteins contain different combinations of        If the protein doesn’t work properly, diseases
amino acids. When placed together in the          can develop. Some diseases that occur due to
correct order, each protein has a unique          mutations in a single gene include cystic
structure and function within your body.          fibrosis and sickle cell anemia.
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                                                  damage, but they also shorten with each round
Mutations can also lead to the development        of DNA replication.
of cancer. For example, if genes coding for
proteins involved in cellular growth mutate,      Studies associate telomere shortening with the
cells may grow and divide out of control. Some    aging process. Some lifestyle factors such as
cancer-causing mutations are heritable, while     obesity, exposure to cigarette smoke, and
others develop through exposure to                psychological stress can also contribute to
carcinogens like UV radiation, chemicals, or      telomere shortening.
cigarette smoke.
                                                  Where is DNA found?
But not all mutations are bad. Some are           DNA is present in our cells. The exact location
harmless, while others contribute to our          of it depends on the type of cell.
diversity as a species.
                                                  Eukaryotic cells
Changes that occur in at least or more than 1             In a eukaryotic cell, DNA is within the
of the population are called polymorphisms.       nucleus.
Examples of some polymorphisms are hair and       Prokaryotic cells
eye color.                                                In prokaryotic cells, DNA resides in the
                                                  middle of the cell, called a nucleoid, coiled
DNA and aging                                     tightly.
Unrepaired DNA damage can accumulate as we
age, helping to drive the aging process.          RNA
Something that may play a large role in the       (Ribonucleic Acid)
DNA damage associated with aging is damage        is a nucleic acid present in all living cells that
due to free radicals. However, this one           has structural similarities to DNA. Unlike DNA,
mechanism of damage may not be sufficient to      however, RNA is most often single-stranded.
explain the aging process. Several factors may    An RNA molecule has a backbone made of
also be involved.                                 alternating phosphate groups and the sugar
                                                  ribose, rather than the deoxyribose found in
One theory as to why DNA damage                   DNA
accumulates as we age concerns evolution.
It’s thought that DNA damage is repaired          Attached to each sugar is one of four bases:
more faithfully when we’re of reproductive        adenine (A), uracil (U), cytosine (C) or
age and having children. After we’ve passed       guanine (G).
our peak reproductive years, the repair process   Different types of RNA exist in cells: messenger
naturally declines.                               RNA (mRNA), ribosomal RNA (rRNA) and
                                                  transfer RNA (tRNA). In addition, some RNAs
Another part of DNA that may be involved in       are involved in regulating gene expression.
aging is telomeres. Telomeres are stretches of    Certain viruses use RNA as their genomic
repetitive DNA sequences at the ends of your      material.
chromosomes. They help protect DNA from
                                                  Different types of RNA exist in cells:
                                                                                                        16
    •   messenger RNA (mRNA),                        The importance of proteins was recognized by
    •   ribosomal RNA (rRNA)                         chemists in the early 19th century, including
    •   transfer RNA (tRNA).                         Swedish chemist Jöns Jacob Berzelius, who in
In addition, some RNAs are involved in               1838 coined the term protein, a word derived
regulating gene expression. Certain viruses use      from the Greek prōteios, meaning “holding
RNA as their genomic material.                       first place.”
messenger RNA (mRNA)
                                                     A protein molecule is very large compared with
molecule in cells that carries codes from            molecules of sugar or salt and consists of
the DNA in the nucleus to the sites                  many amino acids joined together to form long
of protein synthesis in                              chains, much as beads are arranged on a string.
the cytoplasm (the ribosomes).
                                                     There are about 20 different amino acids that
The molecule that would eventually become            occur naturally in proteins. Proteins of similar
known as mRNA was first described in 1956 by         function have similar amino
scientists Elliot Volkin and Lazarus Astrachan       acid composition and sequence.
ribosomal RNA (rRNA)                                 Basic players in molecular biology: DNA, RNA
                                                     and proteins
molecule in cells that forms part of the protein-
synthesizing organelle known as                      What they do is this:
a ribosome and that is exported to
the cytoplasm to help translate the information      WHAT IS THE IMPORTANCE OF
in messenger RNA (mRNA) into protein                 BIOCHEMISTRY IN AN ORGANISM
transfer RNA (tRNA)                                  Biochemistry combines biology and chemistry
                                                     to study living matter. It powers scientific and
 small molecule in cells that carries amino          medical discovery in fields such as
acids to organelles called ribosomes, where          pharmaceuticals, forensics and nutrition.
they are linked into proteins.                       With biochemistry, you will study chemical
                                                     reactions at a molecular level to better
PROTEIN                                              understand the world and develop new ways to
highly complex substance that is present in all      harness these.
living organisms. Proteins are of great
nutritional value and are directly involved in the   Biochemistry leads us to an understanding of
chemical processes essential for life.               structures and functions of DNA which is the
                                                     genetic carrier in all living organisms.
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