Introduction to
BIOCHEMISTRY                                       Medical Science
                                                                           Understand
Topic Outline                                                               diseases states in
       THE SCIENCE OF BIOCHEMISTRY                                         molecular terms.
        THE ELEMENTS AND MOLECULES
        OF LIVING SYSTEMS
       CHARACTERISTICS OF LIVING                  Physical Chemistry
        SYSTEMS THE CELL                                                   Describes
                                                                            thermodynamics,
                                                                            reaction kinetics and
THE SCIENCE OF BIOCHEMISTRY THE                                             electrical parameters
EARLIEST ACTS AND APPLICATION OF                                            of redox reaction
BIOCHEMISTRY IS WINE MAKING
PRACTICED BY MANY COUNTRIES FOR A                  Biophysics
THOUSAND OF YEARS. THIS PROCESS OF                                         Physics concepts of
BREAKING DOWN SUGAR MOLECULES IS                                            structure for
WHAT WE CALL "GLYCOLYSIS" WHICH WE                                          biomolecules
WILL ENCOUNTER IN THE LATTER PARTS
OF THIS COURSE.
                                                   Nutrition
Origin Of BiOchemistry                                                     Illuminate
                                                                            metabolism by
Biochemistry as a science started during the                                describing dietary
19th century pioneering the work of Friedrich                               recuirements for
Wohler. During this time, early biochemists had                             maintenance of
to overcome the doctrine of vitalism, which                                 health.
claimed that living matter and non living matter
were fundamentally different through the action
of a mysterious "life force".                      Microbiology
                                                                           Microorganisms role
DURING WOHLER'S TIME. IT WAS BELIVED                                        for elucidation of
THAT SUBSTANCES IN LIVING ORGANISMS                                         metabo pauways
ARE SOMEHOW QUALITATIVELY                                                   ona regulatory
DIFFERENT FROM NON LIVING ORGANISMS                                         mechanisms
AND DID NOT BEHAVE ACCORDING TO THE
KNOWN LAWS OF PHYSICS AND                          Physiology
CHEMISTRY.                                                                 Investigates life
HOWEVER, WOHLER IN 1828 SHOWED                                              processes at the
THAT UREA, A SUBSTANCE OF BIOLOGICAL                                        tissue and
ORIGIN, COULD BE SYNTHESIZED IN THE                                         organisms level.
LABORATORY FROM THE INORGANIC
COMPOUND AMMONIUM ACETATE.
FRIEDRICH WOHLER                                   Cell Biology
                          must tell you that I                            Describes metabolic
                           can prepare urea                                 and mechanical
                           without requiring a                              division of labor
                           kidney or an animal,                             within a cell
                           either human or a
                           dog.
                                                   Genetics
Biochemistry as a Discipline                                               Analyzes
                                                                            mechanism that give
and an Interdisciplinary                                                    a particu ar cell or
Science                                                                     organism its
                                                                            biochemical identity.
Organic Chemistry
                          Properties and
                           reactions of carbon
                           containing
                           compounds
BIOCHEMISTRY IS FUNDAMENTALLY A                     Major differences between cell structures define
CHEMICAL SCIENCE. IT OBEYS THE LAWS                 the three great classes of organisms : bacterial,
OF PHYSICS AND CHEMISTRY LIKE NON                   archaeal and eukaryotic.
LIVING MATTER, AND IT DRAWS
KNOWLEDGE FROM CHEMISTRY, CELL                          o    Today, classification of organisms are
BIOLOGY, GENETICS AND PHYSICS. IT IS                         based on biochemical analysis: DNA
THE STUDY OF THE COMPLETE DEFINITION                         nucleotide sequence determination.
OF LIFE IN MOLECULAR TERMS BY GIVING                    o    Figure shows the "Molecular Tree of
EMPHASIS ON THE STRUCTURES AND                               Life" which classifies organisms based
REACTIONS OF BIOMOLECULES.THE MOST                           on ribosomal
COMMON ELEMENTS IN THE HUMAN BODY                            RNA sequence.
ARE: CARBON, OXYGEN, NITROGEN AND
HYDROGEN.                                           Important Parts of the Cell and their Fuctions
        CARBON FORMS STABLE
         COVALENT BONDS.                            NUCLEUS
                                                       o control center of the cell
        IT CAN FORM SINGLE, DOUBLE                    o houses all of the cells genetic
         AND TRIPLE BONDS.                                information
                                                       o also controls other cellular activities
        HAS STRUCTURAL VERSATILITY                       such as cell growth, cell division,
         AND ENORMOUS                                     protein production and cell death.
        CHEMICAL DIVERSITY
        DIFFERENT STRUCTURES GIVE                  RIBOSOMES
         RISE TO FUNCTIONAL DIVERSITY.                 o composed of proteins and rRNA
                                                       o blueprints of proteins from the DNA
                                                          are
                                                          'read' and interpreted by ribosomes
1953: THE PRIMORDIAL SOUP HYPOTHESIS                   o assembles amino acid sequences
WAS TESTED BY STANLEY MILLER
MILLER MIXED AMMONIA, METHANE,
WATER AND HYDROGEN IN A CLOSED                      MITOCHONDRIA
SYSTEM SUBJECTED TO CONTINOUS                          o provides energy for the biochemical
ELECTRICAL DISCHARGE.                                     reactions of the cell, it is the
                                                          powerhouse of the cell
THIS SYSTEM WAS ANALYZED SHOWING                       o pumps out energy which is then stored
THAT IT PRODUCED SEVERAL AMINO                            in
ACIDS, CARBON MONOXIDE, CARBON                         o ATP
DIOXIDE AND HYDROGEN CYANIDE.
IT WAS ESTABLISHED THAT BIOLOGICAL                  ENDOPLASMIC RETICULUM
COMPOUNDS COULD HAVE BEEN                              o process and transport new materials
PRODUCED ABIOTICALLY.                                  o rough ER tags newly-synthesized
                                                          proteins before transporting
                                                       o smooth ER is involved in hormone and
CHARACTERISTICS OF                                        lipid synthesis
LIVING SYSTEM AND THE
CELL                                                GOLGI APPARATUS
                                                       o processes and packages proteins and
The Unit of Biological                                     lipid molecules after it left the ER
Organization:                                          o molecules enter the golgi body and is
The Cell                                                   sorted out based on destination
    o 1665 - Robert Hooke's observation of             o remodelling of molecules are
         plant tissue compartments. He called              processed in the cisternae
         them "cellulae" or cells.                     o modified molelecules are secreted out
    o 1840 - Theodor Schwann proposed                      of the cell or to another organelle
         that organisms exists as single cells of
         aggregates of cells.
CYTOPLASM
   o jelly-like substance that fills the interior
      space of the cell
   o mainly composed of water and some
      salts, enzymes and organic molecules
LYSOSOME
     packed with digestive
      enzumesbreakdown and recycle
      unwanted material for the cell (old cell
      parts,Hydrolytic enzymevirus, bacteria)
     plays an important role in apoptosis
CELL MEMBRANE
   o Composed of a semi-permeable lipid
      bilayer
   o controls the entry and exit of
      substances in the cell
   o separates the interior of the cell to the
      external surrounding
CHLOROPLASTS
   o Site of photosynthesis
   o light energy is used to convert carbon
      dioxide and water into glucose
   o chlorophyll harvests the sun's energy,
      it also gives the green color of plants
CELL WALL
   o Composed mainly of cellulose
   o supports and protects plant cells
   o Gives plant cells its characteristic
      rectangular shape
VACUOLE
   o Occupy 90% of the interior space of a
      plant cell
   o functions as storage and is filled with
      sap, proteins, sugar, and other
      molecules
   o Maintains turgor pressure that helps
      plants to keep its shape