Biochemistry - Vitamins Atf
Biochemistry - Vitamins Atf
com
Unit 2.2
Clinical features related to vitamin A
   Effects of deficiency of vitamin A :
        Night blindness : vitamin A behaves as a prosthetic in case of
         holoprotein rhodopsin and if vitamin A is deficient efficienc y of
         holoprotein decrea ses and breaking of aldimine linkage wont
         happen and as a result hyperpolarization is not observed ,
         which causes night blindness.
        Xerophthalmia : dry eye , have many reasons with one being
         vitamin A deficiency. Vitamin A deficiency can cause dryness of
         conjunctiva and cornea.
        Bitot’s spot s : can be on medial or mostly on lateral side
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      Follicular hyperkeratosis : appearance is like toad skin ,
       phrynoderma. It is because of problem in turn over issues as
       the dead skin is not getting shed off and is getting along with
       the new skin.
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  macrophages attack the skin and make it more dark and fragile,
  which sometimes may cause bleeding.
 Because of its turnover function it is acne resistant.
 All trans retinoic acid may cause promyelocytic(anemia) leukemia.
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Unit 2.3
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 Now it’s clear that cholecalciferol will be less in areas with
  less sunlight as Polar Regions.
 As we discussed that pre vitamin D 3 can be converted into
  cholecalciferol
  In presence of sunlight but excess of sunlight is also bad
  as it can destroy the vitamin.
 Now as in skin cholecalciferol is formed in skin , it
  undergoes hydroxylation reaction ( addition of OH) in liver
  at 25 t h position forming 25 -hydroxy cholecalciferol which
  in kidney is converted into 1,25 -dihydroxy cholecalciferol
  (calcitriol) having 3 OH groups in presence of 1 -alpha
  hydroxylase enzyme.
 Calcitriol is the active form of vitamin D
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 Prominent and major storage form of vitamin D is 1,25 -
  dihydroxy cholecalciferol.
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(metabolism of vitamin D)
Calciol
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                           Calcidiol
Calcitriol
Calcitetriol
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 ( synthesis and activation of vitamin D)
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 If we consider actions of vitamin D , being a steroid
  hormone with intracellular receptors, its actions are not
  lightning fast but takes time and are persistent.
 Anti-proliferative hormone : vitamin D , tries to keep
  proliferation of cells under check which as a result
  decreases chances of cancer specially in colon
  ,prostate,breast.
 Immune modulatory action vitamin D can also help in
  increasing synthesis of cathelicidin which helps the
  organism in making peptide called defensin which have
  innate immunity protection along with ApoBEC -3G and
  lysozymes which work against intracellular infection.
 Because of antiproliferative function of vitamin D it
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  decreases any kind of autoimmune overflow to beta cells
  of pancreas which is act ually main reason of diabetes
  mellitus and X syndrome .
 Effects of deficiency of vitamin D :
     1. Rickets (children) : bow shaped legs and rachitic
       rosary as a result , which refers to expansion of the
       anterior rib ends at the costa chondral junctions.
     2. Osteomalacia i.e. softening of bones which in older
       age may result into fractures.
 If we consider hyper -vitaminosis which is most toxis in
  vitamin D :
     1. Calcinosis cutis : soft tissue cal cification is observed
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 If we consider quantity that should be present it
  should be more then 15 n-mole per liter for 25 -
  dihydroxycholecalciferol.
 In circulation recommended levels of vitamin D is
  like :
              Amount                     Status
<12.5
12.5<amount<30
30<amount<50
=50
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                50<
>300nmoleperlitre
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vitamers of vitamin K.
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 It is also antiatherogenic, as it inhibits fatty depositions. Generally
  whenever HDL > LDL atheromatic block is formed which initiate free
  radicle reaction, later on becoming a thrombus and getting
  detached as embolus.
 Vitamin E is stored in liver. It is not readily formed inside body and
  must be included in diet. Vitamin E is absorbed through chylomicrons.
 There is a strong connection between vitamin E,vitamin C and
  selenium. Selenium and vitamin E have a sparing effect on each
  other.
 Whenever concentration of selenium decreases vitamin E increases
  and vice versa.
 Vitamin E is also anti-inflammatory, by having negative regulation on
  prostaglandin synthesis ultimately mediating inflammation, fever and
  pain.it does so by blocking activity of protein kinase A and
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 Deficiency of vitamin E :
      Periphe ral neuropathy (axonal degeneration) , this deficiency
       can mimic the pyridoxine deficiency that happens because of
       intake of anti tubercul osis drugs inhibiting pyridoxal kinase.
      Because of this inhibition pyridoxal cannot be converted into
       pyridoxal phosphate i.e. vitamin B 6 . So we can say that
       deficiency symptoms for vitamin E and B6 run parallely.
      Stereognosis is affected.
      Vibrations are not felt.
      Retinal muscular atrophy retinopathy is caused by vitamin E
       deficiency and vitamin A deficiency corresponds to macular
       degeneration. Deficiency of Vitamin A and Vitamin E together
       cause extreme harm to vision.
      Spinocerebellar ataxia
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       Beurger’s disease also called as thrombo-angiitisoblitera ns as
        blood vessels become inflamed, swell and can be blocked by
        blood clots
       Intraventricu lar hemorrhage of prematurity attenuation.
       Easily delay ageing process
 Recommended diet ary allowance for vitamin E is 15-20 mg per day
 Vitamin E is present in vegetable oil like sunflower, safflower, wheat
  germ oil and not from fish liver oi l unlike other vitamins
 Hypervitaminosis E is caused on intake more than 500mg per day
  which leads to hemorrhagic tendency as vitamin E behave as an
  anticoagulant (minimalistic action)
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Unit 2.5
Fat soluble vitamin K
   Earlier it was called as coagulation as excess and deficiency of
    vitamin K is seen during coagulative diathesis
   Structure has isoprenoid side chains, which determines dif ferent
    structures.
   If 20 C side chain is present it is vitamin K1, phylloquinone
   If 30 C chain then vitamin K2, menaquinone
   Menadione with water soluble actions is form of phylloquinone itself
    and have a nullified side chain
   Chylomicrons are very important in fat absorption
   Vitamin K synthesis generally happens in intestine and then store d
    in liver and for transportation beta-lipoproteins are used
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   Warfarin can block the enzymes involved in vitamin K cycle which
    may result in cycle being stopped.
   Biological function of vitamin K is to form gla domains by gamma-
    decarboxylation so that the protein can accept calcium.
   Now if we collectively see the effect of vitamin K on our body it
    will be :
         Proteins involved in coagulation cascade i.e. 2,7,9,10factore ,
          protein-S and protein-C must be activated to accept
          calcium by their gamma decarboxylation which is done with
          help of vitamin K
         Protein resp onsible for bone metabolism i.e. osteocalcin also
          needs to form gla domains in order to accept calcium for
          proper bone mineralization.
         Vascular smooth muscle matrix protein
         Nephrocalcin also follows same pathway and its deficiency
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          mey result in deterioration of kidney functions.
 Reasons for deficiency of vitamin K:
      Fat malabsorption caused du e to intestinal injuries or
       obstructive jaundice.
      Antibiotic abuse as this may kill the commensal bacteria which
       provide us vitamin K
      New born children only feeds on breast milk which is a poor
       source of vitamin K and not many commensal bacteria are
       present, causing relative vitamin K deficiency which further
       results in hemorrhagic diseases.
 Warfarin abuse: warfarin is drug used to block vitamin K epoxide
  reductase so no reduction that means no vitamin K cycle so no gla
  domains will be formed and therefore no coagulation.
 Fetal warfarin syndrome: bony defects will be observed specially
  glass like appearance of pelvis. Because warfarin nullifies gla domain
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Unit 2.6
Water soluble vitamin: thiamine (B1)
   Water solubl e vitamins involve B-complex and vitamin C.
   Vitamin B1 is the water-soluble vitamin also called thiamine.
   Thiamine is vitamin but thymine is pyrimidine that is nitrogenous
    base.
   Active form of thiamine is thiamine diphosphateand it is also called
    thiamine pyrophosphate. As when the bond is broken the energy is
    released in form of heat.
   Substituted pyrimidine if combined with substituted thiazole bound
    to pyrophosphate which makes it active form of vitamin B1
   Thiamine is not motile or active until pyrophosphate is attached to
    it.
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 Thiamine pyrophosphate can act as coenzyme for enzymes cleaving
  C-C bond.
     1. PDH complex which is complex enzyme used in liker reaction
        between glycolysis and TCA cycle. In PDH complex there are 3
        enzymes and 5 vitamins are present. One of vitamin is
        thiamine.
     2. Alpha-ketoglutarate dehydrogenase complex in carbohydrate
        metabolism
     3. Branched chain alpha-ketoglutarate dehydrogenases involved
        in amino acid metabolism.
     4. HMP shunt have trans-ketolase enzymes.
 The support to tryptophan pyrolase enzyme who can break indole in
  tryptophan. Tryptophan pyrolose activity is supported by thiamine.
 The special compounds coming out of tryotophan may be attributed
  to deficiency of vitamin B1.
 In case of branchedAfraTafreeh.com
                      chain alpha-ketoglutarate dehydrogenase
  deficiency may lead Maple syrup test.
 If linker is lost during then the next option is lactic acidosis as
  pyruvate is not able to move forward to become acetyl-co-A. So
  TCA cycle is not possible, causing decrease in amount of ATP.
 HMP shunt blocking of trans-ketolase can affect then ribose
  formation and NADPH formation be altered.
 Thiamine triphosphate is having direct involvement in chlorine
  channel regulation. this is where it has direct involvement in chloride
  channel regulation, we will be having conduction of nerve impulses
  done properly
 So if at all thiamine is deficient part and may suffer neurological
  deficits.
 Consistency to help trans-ketolase in RBCs, the RBCs have only one
  source of energy in form of ATP. And they are not that well
  prepared for oxidative stress, so NADPH is required while handling
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  the stress. But in case it all doesn’t get back to normal hemolysis
  will happen causing hemolytic jaundice.
 RBC transketolase function can be tested in:
  1. Absence of thiamine pyrophosphate in estimation system: activity
     is lesser
  2. Adding in estimation system: activity is more
 Vitamin B1 can be obtained from: cereals, unpolished rice, aleurone
  layer on grains.
 Yeast can give a good source of thiamine
 Nuts are also rich in thiamine.
 Whole wheat flour and unpolished handful rice can be a good source
  of vitamin B1.
 RDA for thiamine is 1-1.5 mg per day
 When a patient is alcoholic, absorption of nutrients decreases.
 Alcohol is pure calorie with zero nutrition value.
 If a person is chronic alcoholic and having low amount of nutritional
  value is vulnerable to Wernicke Korsakoff syndrome.
 Wernicke stands for encephalopathy and Korsakoff is for psychosis.
 Neurotic people will have insight whereas psychotic people doesn’t
  have insight. Neurotic person will rea lize about what he did wrong
  but psychotic will never understand and will repeat the same
  mistake again.
 In above syndrome the CNS is at attack:
     1. Global confusion
     2. Ophthalmoplegia
     3. Ataxia
     4. Memory loss
     5. Polyneuritis
 In general thiamine deficiency causes Beri-Beri which can be of 3
  types as:
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      1. Dry Beri-Beri: it can involve PNS and CNS.
         Chronic peripheral neuritis is type of dry Beri-Beri and may
         botassociated with heart failure.
      2. Wet Beri-Beri: there is CVS involvement. Peripheral
         vasodilation followed by cardiac failure which is followed by
         dyspnea and tachy-cardia. Leading to cardiomegaly which may
         cause pulmonary edema.
      3. Neo-natal Beri-Beri: also called as Sosh inBeri-Beri. It is
         referred to as acute pernicious disease.
 More diuretic may also cause deficienc y.
 Person having const antly tea will also face problem with this, as tea
  has antivitamin in it, which will alter the vitamin B1.
 Shellfish activity
 When a patient is having psychosis he will start up making/filling up
  stories on his own
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  Which is called confabulation. If it is for long term it may cause
  amnesia where people can not survive
 Treatment is giving in high dose thiamine that can be given
  intravenously or int ra-muscularly for 3-8 days and oral thiamine. An
  alcoholic person mistbe given more than a usual person.
 Even if thiamine is given in excess it will be lost with urine as it is
  water solub le.
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Unit 2.7
Water soluble vitamin: riboflavin and niacin
   Riboflavin and niacin are called twin vitamins
     (structure of riboflavin)
   Riboflavin is made up of dimethyl isoalloxazine ring.
   Riboflavin is either present in form of FMN and FAD.
   FMN is combined form of riboflavin, D-ribitol and phosphate.
   To FMN if we add one more phosphate and ribose and nitrogenous
    base, it becomes FMN nucleotide which is FAD.
   The most important function of FMN or FAD is to act as carriers to
    the concept of electron transport chain so we have FMN being a
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  part of complex 1. It accepts the hydrogen and electrons and then
  loose it to FeS.
 In case of complex 2 the electrons are given by FAD, and from here
  electrons will be given to Q.
 So FMN is belonging to complex 1 and FAD belongs to complex 2.
 The most common sources of riboflavin are:
      Unpolished grain
      Milk, egg, meat, liver, yeast
      Fresh fruits and vegetables
 Riboflavin is heat and acid resistant.
 Deficiency of riboflavin will cause magenta color tongue because of
  cheilosis that happens where the pigmentation of tongue is altered.
 Angular stromatitis: cracking at angles od lips
 Seborrheic dermatitis
 Scales of skin will b e AfraTafreeh.com
                          seen like dandruff
 FAD and FMN have been known to help glutathione reductase which is
  dependent on selenium to keep RBC intact in order to prevent from
  oxygen attack.
 FAD are co-enzymes in different react ion involved.
 FAD and FMN helps in different unique functions
 In the three complexes i.e. PDH complex, AKGDH complex and
  branched AKGDH complex on of the vitamin involved is riboflavin and
  niacin.
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   (vitamin B3 niacin)
 Vitamin B3 is generally found on form of nicotinic acid, and can act
  as anti-dyslipidemia agent prevents against dyslipi demia.
 The COO- group of niacin may take uo NH3+ to become nicotinamide
  .
 Nicotinamide along with nucleotid e it is called nicotinamide adenine
  dinucleotide .
 Common sources for niacin are:
 Unpolished rice
 Milk, egg, meat, liver, yeast, fish
 Legumes
 Niacin can be present in form of NAD or NADP. NADP is used in
  reductive pathway. NAD is used in combustion reactions inside
  mitochondria. But glycolysis also have NAD even though it occurs in
  cytosol.
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 The NAD+ oxidoreductases are of class 1 enzymes like :
       Lactate dehydrogenase
       Glyceraldehyde-3-phosphatase
       Pyruvate dehydrogenase complex
       Alpha-ketoglutarate dehydrogenase
       Branched alpha-ketoglutarate dehydrogenase
       Glutamate dehydrogenase which I stype of oxidative
        deamination where oxidation happens in a way glutamate is
        getting converted into alpha-keto acid. in this process also
        NAD becomes NADH+(H+).
 Niacin has natural anxiety reliving property that’s why people call it
  God’s own valium.
 Some theories claim that the niacin is just a product of tryptophan
  reactions which is controlled by vitamin -B6. So, vitamin B6 deficiency
  may ultimately cause niacin deficiency.
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 So, we can say that vitamin B3 and B6 are connected by tryptophan
  pathway.
 60mg of tryptophan gives 1 mg of niacin.
 If tryptophan is taken in optimum amount will cause
  satisfaction/relaxation by releasing serotonin.
 Nicotinic acid in its purest form may be given to increase HDL
  concentration (highly possible) and to decrease LDL (low possibi lity).
  So it can be given in primary and secondary lipidemia
 Niacin deficiency may happen because of:
     1. Alcoholism
     2. Vitamin B6 deficiency
     3. Quinolinate phosphor ribosyltransferase is rate limiting enzyme
        in production of niacin.
     4. Any drug that inhibits activity of enzyme quinolinate phosphor
        ribosyltransferase
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Unit 2.8
Vitamin B6, pantothenic acid and biotin
   Vitamin B6 is also called pyridoxine.
   It has classical vitamers as pyridoxine, pyridoxal and pyridoxamine.
   It can behave as co-enzyme. Its most important function is in amino
    acid metabolism
   Bi-Bi theory and ping pong mechanism for transamination. To knock
    off the COOH group from amino acid we must ficthe amino group so
    that it doesn’t follow. For this we use pyridoxal which combines with
    amino group to form pyridoxamine. most of the decarboxylation
    reactions are dependent on pyridoxal phosphate except the ones
    based on dehydrogenase complexes. In same way if amino group is
    supposed to be released the COOH must be kept on hold and this is
    also done by vitaminAfraTafreeh.com
                          B6. So, it is helping in transamination.
    The ping pong mechanism when alanine combines with alpha-KG and
    forms glutamate and pyruvate in presence of ALT we need PLP. In
    this case when amino group have to be removed from alanine PLP
    will form a Schiff base with alanine so it can be broken down to give
    the required results. Ping pong mechanism is governed by
    transaminase enzyme with help of PLP.
   PLP also helps in carbohydrate metabolism in glycogen metabolism
    where breakdown of glycogen requires glycogen phospholipase which
    requires vitamin B6 as a cofactor.
   Vitamin B6 is also important in tryptophan metabolism as when it
    enters nicotinic pathway of synthesis will require presence of vitamin
    B6. Therefore people with B6 deficiency will have B3 deficiency
   It Is helpful in heme synthesis, during the condensation reaction
    happening where glycine and succinyl co-A forms delta-ALA. Patient
    may suffer anemia.
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      o Myocardial infarction is also possible.
 Deficiency manifestation happen because of:
    o Alcoholic
    o INH administration will increase kynurenine levels which will
        increase xanthurenic acid which can be tested by tryptophan
        test.
 B6 can be therapeutically used because:
     o it can help in clearance of oxalate stones by altering the pH
     o Gyrate atrophy of retina where patient has deficiency of
       gamma ornithine amino transferase supported by B6
 Pantothenic acid:
 Different vitamers are pantoic acid and beta-alanine and they come
  together in amide linkage. As alanine will have amino grou p and
  pantoic acid will have carboxylic part which forms amide linkage
  which is precursor for co-A which acts as a tail for acyl groups.
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 To make co-A from pantothenic acid, 4 ATPs are used.
 Beta-mercaptoethanol amine will have sulfhydryl groups which is
  helpful in making disulfide linkages.
 Acetyl co-A on combining with choline will form acetyl choline which is
  parasympathetic neurotransmitter.
 HMG co-A can take up two pathways either cholesterol synthesis or
  aceto-acetone beta hydroxybutyrate with help of enzyme HMG co-A
  synthase.
    If pantothenic acid is deficient it can causeGopalan’s burning foot
    syndrome which shows melalgia.
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    (biotin, biocytin, and carboxybiocytin)
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 Biotin has a structure that looks like a lid has kept over pan. The
  cap is the guanidine group which is component of arginine.
 Biotin has red uced urea in its structure.
 Biotin contains ring with aliphatic chain.
 Biocytin is active form of biotin and can be converted into carboxy-
  biocytin by carboxylation and this requires a ATP molecule.
 Carboxy-biocytin can provide the carboxy group to any other
  compound and make it carboxy-x.
 Biotin is involved in different reactions and helps following enzymes:
    Acetyl co-A carboxylase
    Beta-Methyl crotonyl co-A mutase
    Propionyl co-A carboxylase
    Pyruvate carboxylase
 There is a concept egg white injury. Avidin is in white of egg and
  biotin is in yell ow, people consume raw eggs and in that case avidin
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   having avidity for biotin binds with it to form complex .this complex
   is useless and wont help in any carboxylation reaction causing biotin
   deficiency. In ELISA whether competitive or sandwich we look for
   biotinylatedanalyte. The antigen antibody have strong bonding just
   like avidin and biotin. This way we can do analyze the complexes in a
   similar way.
 Affinity and avidity are different as in affinity the compounds
  search for each other and avidity helps in making a strong bond.
  Basically, affinity brings the compounds together and avidity keeps
  them together.
 Biotin is important for our hair, nails and skin. High biotin dose can be
  used for treating alopecia and abnormal nails.
 In biotin deficiency can lead to flaky skin and nails.
 Biotin deficiency causes Leiner’s disease
 There are biotin independent carboxylation reactions:
    o Any reaction which is vitamin k dependent like in coagulation
       cascade, glu to gla domain reactions
    o Carbomoyl phosphate synthetase has no dependency on biotin.
    o Malic enzyme involves pyruvate becoming malic acid by
       introduction of C
    o In purine rings the C6 addition from CO2 is also not
       dependent on biotin.