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                                 Groundwater, a vital freshwater resource catering to agricultural, domestic, and industrial needs,
                                 faces a pressing challenge of contamination due to escalating human activities. This study focuses
                                 on the Ayad River Basin in the Udaipur district of Rajasthan, employing the FEFLOW simulation
                                 code for the first time. A steady-state numerical model and a groundwater contaminant prediction
                                 model for total dissolved solids (TDS), nitrate, and fluoride were developed, simulating trends over
                                 the next five years with an accuracy exceeding 95%. The results reveal an eastward increase in TDS,
                                 nitrate, and fluoride concentrations, attributed to contamination from two waste disposal sites-
                                 Titadi and Baleecha. Titadi, operational for four decades until closure in 2010, retains residual waste
                                 over 32 thousand m2. The initiation of a new dumping ground at Baleecha by the Udaipur Municipal
                                 Corporation post-2010 exacerbates regional contamination. Nitrate contamination is particularly
                                 high in agricultural zones with excessive chemical fertilizer usage. Of the 27 scenarios tested, 23
                                 support using the water for irrigation but would require treatment before using it for drinking.
                                 Recommendations include deploying a chemical sensor network for real-time data input into the
                                 web enabled FEFLOW model, real-time monitoring and alerts, and a mobile application providing
                                 personalized guidance on water usage and health risks in case of contamination. This study can be
                                 beneficial to decision-makers, who work on the policy and groundwater management strategies.
                                 Water, essential for life, faces increasing risks due to significant changes in hydrology caused by climate change1,2.
                                 In this situation, groundwater plays a crucial role in maintaining regional water resource stability3,4. Ensuring
                                 reliable water supply requires a comprehensive approach that integrates surface and groundwater as a single
                                 hydrological resource5,6. Surface water and groundwater are closely linked and depend on each o ther7–10. Climatic
                                 and geographic factors create complex interactions between surface water and groundwater, so contamination in
                                 one often affects the other11,12. Human activities significantly contribute to groundwater pollution13–18. Practices
                                 like pesticide use in agriculture, industrial waste discharge, pipeline leaks, coal mining, and landfills significantly
                                 pollute groundwater, risking this essential resource19–21. Groundwater, like other water sources, is vulnerable
                                 to contamination, making rigorous monitoring and protection e ssential22–25. Groundwater and surface water
                                 interact in large landscapes due to many different f actors26,27. Groundwater moves into and out of streams across
                                 the landscape, showing complex water flow p       atterns28–30. Understanding and managing how water systems are
                                 connected is crucial for using water resources s ustainably31–33.
                                     Researchers use various methods to measure contaminants in groundwater. Groundwater modeling is a
                                 key approach to understand and predict how the system will behave in the future34,35. Groundwater models
                                 can be divided into physical, analogue, and mathematical types36,37. Physical models, like the Sand tank, show
                                 how groundwater works in a lab setting, but they can have scaling issues38–40. Analogue models use electron-
                                 ics to mimic water flow, while mathematical models use equations to represent groundwater systems, which
                                 can be solved with numbers or formulas41–43. Analytical models give exact answers for simple situations, while
                                 numerical models estimate solutions for more complex c ases44. Prominent tools for measuring groundwater
                                 pollution include MODFLOW and FEFLOW, which provide good r esults45–48. Analytical models usually assume
                                 steady-state, one-dimensional conditions, but some, like analytical element models, can handle two-dimensional
                                 groundwater flow49,50. Contaminant transport models can use one-dimensional groundwater flow and one-, two-,
                                 or three-dimensional transport c onditions51–54. Numerical models are widely used in practical applications for
                                 several reasons, primarily due to their versatility and ability to handle complex s cenarios55–57. Numerical mod-
                                 els are preferred in most practical applications due to their ability to manage complexity, flexibility, scalability,
DHI (India) Water & Environment Pvt Ltd., New Delhi, India. email: kupa@dhigroup.com
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                                            predictive capabilities, data integration, cost-effectiveness, and suitability for scenario testing. These advantages
                                            make them powerful tools for understanding and managing groundwater systems effectively. Modelers face a
                                            tough challenge in simplifying real-world problems accurately58. The accuracy of numerical models depends on
                                            precise data input, the size of steps used in space and time (larger steps can lead to more errors), and the method
                                            chosen to solve the model equations59–62. Paying attention to these details is crucial to make sure groundwater
                                            models are reliable for assessing and managing contamination effectively using scientific m      ethods63,64.
                                                 A detailed groundwater flow and contamination transport model has been carefully created for the Ayad
                                            River Basin, using the advanced features of the FEFLOW model. The primary objective is to conduct a compre-
                                            hensive assessment of the probable concentrations of Total Dissolved Solids (TDS), nitrate, and fluoride within
                                            the affected area. Contaminant transport models play a crucial role by accurately simulating how contaminants
                                            move and change chemically underground alongside groundwater flow36,65,66. The model is advanced because it
                                            can accurately calculate how contamination levels of TDS, nitrate, and fluoride change month by month. Fur-
                                            thermore, it carefully shows how substances move and mix in the area where different water sources meet, giving
                                            detailed insights into how contaminants interact underground. The model results clearly show the vertical and
                                            horizontal spread of each contaminant. A notable contribution of this study is the pioneering generation of an
                                            empirical equation that correlates migration distance with time, presenting a quantifiable m     etric67. This innova-
                                            tive approach is a special addition to what we already know, making this study different from previous efforts in
                                            the field. The empirical equation offers a valuable tool for quantitative measurements, previously unexplored in
                                            the region. This novel methodology significantly advances our comprehension of contaminant dynamics in the
                                            Ayad River Basin, providing a robust foundation for informed decision-making in the realms of management
                                            and remediation strategies.
                                                 Rathore et al.68 conducted a study on the Ayad River post its passage through Udaipur’s urban and industrial
                                            areas. Sampling at points of domestic and industrial effluent discharge identified significant contamination,
                                            focusing on key parameters such as pH, temperature, conductivity, total dissolved solids (TDS), dissolved oxygen
                                            (DO), biochemical oxygen demand (BOD), chemical oxygen demand (COD), total organic carbon (TOC), acid-
                                            ity, alkalinity, total hardness, chloride, nitrate, phosphate, microbial population count (MPN), and heavy metals.
                                            Their findings highlighted severe pollution downstream of industrial discharge points. Kalal et al.69 investigated
                                            surface water quality of the Ayad River, focusing on pollutants during June to August 2020. Parameters assessed
                                            included total hardness, TDS, chloride, sulphate, fluoride, iron, pH, BOD, COD, and DO. Elevated pollution
                                            levels were observed at industrial discharge points, with COD and BOD concentrations reaching 480.0 mg/l and
                                            162.0 mg/l respectively, indicating severe organic pollution. Dhayachandhran et al.70 conducted a GIS-based
                                            assessment of groundwater quality along the banks of the Adyar River. Their study identified issues such as high
                                            electrical conductivity, ion concentrations, and chloride dominance stemming from industrial and residential
                                            effluent discharge. Seawater intrusion exacerbated groundwater quality near coastal areas, necessitating robust
                                            management strategies for water quality improvement. In a groundwater quality study of the Banas River Basin,
                                            Pareta et al.71 analyzed data spanning 2000–2018, emphasizing physico-chemical parameters. Significant con-
                                            taminants identified included fluoride, nitrate, chloride, calcium carbonate ( CaCO3), and salts. Utilizing the
                                            Water Quality Index (WQI), the research revealed a declining groundwater quality index (GWQI) from west to
                                            east, with elevated salinity and hardness particularly noted in the eastern micro-watershed (MWS).
                                                 Groundwater flow and contaminant transport modeling present significant challenges, as noted by Diersch
                                            et al.72, due to the complexity of managing spatially and temporally variable parameter fields. Integration of
                                            FEFLOW with GIS ARC/INFO addresses these challenges by providing a robust platform for managing para-
                                            metric and geometric data, advanced computational tools, graphical visualization capabilities, and interactive
                                            data exchange functionalities. Sarma et al.73 emphasize the increasing importance of simulating contaminant
                                            transport in both unsaturated and saturated groundwater zones, driven by rising water demands. Integrated
                                            models that consider interactions between these zones offer more accurate predictions compared to standalone
                                            models, crucial for effective regional groundwater management by better forecasting solute movements within
                                            groundwater systems. Kumar et al.74 underscores the utility of groundwater contaminant transport models
                                            such as MODFLOW, MT3DMS, RT3D, FEFLOW, and MODPATH in predicting contamination behavior and
                                            facilitating management strategies. They stress the necessity for precise modeling objectives and appropriate tool
                                            selection to ensure accuracy and avoid errors in groundwater management practices.
                                                 This study focuses on assessing groundwater quality in the Ayad River Basin, located in Udaipur district,
                                            Rajasthan, using the FEFLOW simulation software. The primary objective is to develop a numerical model
                                            capable of predicting the spatial distribution and temporal trends of total dissolved solids (TDS), nitrate, and
                                            fluoride contamination over the next five years with a high accuracy exceeding 95%. The investigation addresses
                                            significant contamination challenges arising from human activities, particularly from historical and current waste
                                            disposal sites such as Titadi and Baleecha. The study aims to provide insights crucial for developing effective
                                            groundwater management strategies, emphasizing the importance of real-time monitoring and intervention to
                                            mitigate contamination impacts on agricultural and domestic water supplies in the region.
                                            Study area
                                            The Ayad River Basin, spanning 1207 k m2, is geographically positioned between 24°50′16" to 24°27′46" northern
                                            latitude and 73°31′44" to 73°59′44" eastern longitude. Administratively, it encompasses four tehsils (Girwa, Mavli,
                                            Vallabh Nagar, and Gogunda) in Udaipur district and one tehsil (Nathdwara) in Rajsamand district75. Originating
                                            from the Gogunda hills in north-west Udaipur, the Ayad River flows over a 68 km stretch before entering the
                                            Vallabh Nagar reservoir to the east of Udaipur (Fig. 1). As a seasonal river, it serves as a tributary to the Berach
                                            River, which, in turn, is a tributary to the Chambal River in the Yamuna basin. The Ayad River Basin experiences
                                            a tropical, semi-arid climate, characterized by summer temperatures ranging from 28.8 °C to 42.3 °C and winter
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Figure 1. Location map of Ayad River Basin, Udaipur, and extents of the flow and transport model.
                                  temperatures from 3.5 °C to 18.8 °C. The average annual rainfall is 640 mm, predominantly influenced by the
                                  southwest monsoon, delivering about 90% of the annual precipitation from July to mid-October. Groundwater,
                                  sourced from wells and hand pumps, constitutes 69% of the total irrigated area, with surface water contributing
                                  the remaining 31%.
                                  Precipitation data
                                  Precipitation data spanning from 2000 to 2022 was gathered from the Water Resource Department (WRD), Govt.
                                  of Rajasthan for three distinct rain gauge stations-namely, Udaipur (Girwa), Badgaon, and Biliya (Fig. 1). This
                                  comprehensive time series dataset was meticulously curated to serve as input for the FEFLOW model.
                                     In 3D modeling, the flux boundary condition is characterized by the unit (L/T), denoting an influx of water
                                  across a defined area over a specific time. Given the presence of three distinct rain gauge stations, the basin
                                  boundary underwent segmentation into three delineated sections through the application of the Thiessen poly-
                                  gon method. Subsequently, all nodes within the top slice of the resultant Thiessen polygons were designated to
                                  represent rainfall-induced flow, thus establishing a comprehensive representation of the inflow dynamics across
                                  the basin boundary.
                                  Hydraulic‑head data
                                  The hydraulic-head data encompassing both pre-and post-monsoon periods spanning from 2011 to 2022 were
                                  meticulously gathered from 45 groundwater monitoring wells, sourced from the Ground Water Department
                                  (GWD). Govt. of Rajasthan (Fig. 1). The application of a hydraulic-head boundary condition involves assigning a
                                  predetermined hydraulic head value to a specific node within the model. In contrast to calculating the hydraulic
                                  head as an outcome of the simulation, these nodes are characterized by having their head values predetermined
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                                                 Table 1.  Pumping wells considered in the numerical model. Source: College of Technology and Engineering
                                                 (CTAE), Udaipur76.
                                                 by the boundary condition. This condition can result in either an inflow into the model when neighboring nodes
                                                 exhibit lower potential or an outflow from the model in the presence of a gradient from neighboring nodes
                                                 toward the boundary condition. Head boundary conditions find application in scenarios where the hydraulic
                                                 potential is known in advance, such as in surface water bodies with a direct connection to groundwater, pump
                                                 sumps maintaining a constant level for dewatering, or seepage faces in conjunction with a constraint condition.
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                                  Modelling approach
                                  The initial stage in any modeling endeavor involves delineating the model objectives. In the modeling process,
                                  meticulous attention is directed toward the acquisition and processing of data. Nonetheless, the pivotal step in
                                  modeling is the conceptualization of the model. Following the construction of the model and its preliminary
                                  execution, subsequent steps encompass calibration, verification, and sensitivity analysis. A graphical representa-
                                  tion of the sequential stages in groundwater modeling is depicted in Fig. 2.
                                     A numerical model for groundwater flow and contamination transport was constructed using the FEFLOW
                                  groundwater modeling software. FEFLOW was chosen for its distinctive advantages over alternative modeling
                                  systems, including the ability to employ flexible meshes essential for accommodating the 3D geometry of the
                                  model area. Additionally, FEFLOW’s capability to conduct density-dependent flow modeling was crucial for
                                  capturing buoyancy effects associated with contamination layers.
                                     The developed FEFLOW model was employed to analyze the dynamic behavior of nitrate, fluoride, and total
                                  dissolved solids contamination. Predictions were made regarding the expected duration of contamination over
                                  a specified period, 5 years. The outcomes of the model were instrumental in formulating strategies aimed at
                                  mitigating the average contamination levels of nitrate, fluoride, and total dissolved solids in abstracted water.
                                  Formulating modelling objectives. The main objective of this study is to investigate groundwater contami-
                                  nation in the Ayad River Basin. Specifically, the study aims to discern the current state of contamination and
                                  project future trends, focusing on key parameters such as nitrate ( NO3−), fluoride ( F−), and total dissolved solids
                                  (TDS). The overarching goal is to employ the FEFLOW model to comprehensively analyze and quantify the
                                  extent of groundwater contamination. By doing so, it seeks to provide valuable insights into future trends, pre-
                                  dicting whether the level of nitrate, fluoride, and TDS will rise of fall.
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                                            conceptual model, which were solved through numerical methods. This approach ensured accurate predictions
                                            and effective management of groundwater quality in the Ayad River Basin.
                                            Governing processes
                                            Flow process. The groundwater flow process is simulated, incorporating unsaturated flow effects through the
                                            utilization of the Richards’ e quation83. This equation, a simplified dual-phase model, efficiently captures water
                                            movement and desaturation effects, derived from the principles of mass and momentum conservation84. The
                                            Richards is expressed as:
                                                                                                                   
                                                                                        ∂θ                 ∇υ/
                                                                                            = ∇ · K(θ)          − ez
                                                                                        ∂t                 γ
                                            where θ is the volumetric water content, t is time, K(θ) is the unsaturated hydraulic conductivity, ψ is the pressure
                                            head, γ is the unit weight of water, e z is the unit vector in the vertical direction.
                                               The equation describes how water content (θ) changes over time due to fluxes driven by gradients in pressure
                                            head (ψ) and the unsaturated hydraulic conductivity (K(θ)). Richards’ equation is crucial in modeling processes
                                            such as infiltration, groundwater recharge, and plant water uptake in agricultural and environmental studies. Its
                                            solutions provide insights into the movement and distribution of water in soils and other porous media under
                                            varying moisture conditions.
                                            Transport process. Contaminant migration is assessed through the advective–dispersive transport model
                                            within FEFLOW, integrating advective transport (associated with water movement) and dispersive/diffusive
                                            transport processes. During the steady-state calibration phase, no contamination transport is calculated. Nev-
                                            ertheless, a transport model for contaminants is introduced, incorporating a static (immobile) contaminant
                                            distribution to account for density effects during the steady-state calibration.
                                            Density dependency. Variations in contamination within the aquifers surrounding the Ayad river, and major
                                            lake, reservoir are recognized for their impact on the hydraulic system, primarily attributed to buoyancy forces.
                                            The model incorporates these buoyancy forces by employing a linear correlation between fluid density and dis-
                                            parities in nitrate, fluoride, and TDS concentrations.
                                            Spatial discretization
                                            The FEFLOW modelling software employs a flexible 3D meshing technology grounded in a 2.5D mesh geometry,
                                            wherein a completely unstructured 2D mesh is extruded over a designated number of layers with variable thick-
                                            ness, extending into a 3D domain. The layers can be made discontinuous by deactivating specific elements of the
                                            mesh, allowing for pinch-outs of geological layers. This process unfolds in two distinct steps, namely Horizontal
                                            2D meshing and vertical 3D layer setup, elucidated in the subsequent sub-sections.
                                            Horizontal discretization. The primary aim of the horizontal mesh is to establish an optimal triangular mesh
                                            geometry that effectively approximates both human-made and natural features pertinent to the modelling pro-
                                            cess. Specifically, the relevant features for this modelling work include the flow model’s domain extent, the trans-
                                            port model’s domain extent, and the abstraction wells85. A secondary objective in this context is to ensure an
                                            average element size conducive to both the flow and transport models. The average element size in the outer
                                            basin and the inner area around the wells is approximately 1000 m and 10 m, respectively, with a smooth transi-
                                            tion zone between them. Figure 3 illustrates the geometry of the finite element mesh. An effective measure of the
                                            2D triangular mesh’s quality is the distribution of triangle angles, ideally nearing 60° (equivalent to an equilateral
                                            triangle). A standard benchmark involves assessing the number of elements with angles larger than 90° or 120°.
                                            The present model exhibits excellent mesh quality, with only 0.1% of the mesh angles exceeding 90° and none
                                            surpassing 120°.
                                            Layer configuration (3D mesh setup). Density-dependent flow models, exemplified by the model discussed
                                            here, demand meticulous vertical discretization, particularly in regions with density gradients. FEFLOW, a
                                            finite-element model utilizing layered unstructured grids, provides significant flexibility to tailor model layers
                                                        bjectives86. Model layers, also known as numerical layers, may deviate from the geometric arrange-
                                            to diverse o
                                            ment of hydrogeological layers (formations/units). In this context, three objectives guide the approach: main-
                                            taining model layer thickness within an acceptable range for accuracy and stability, ensuring element geometry
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Figure 3. Finite-element mesh and compact supermesh in Ayad River Basin, Udaipur.
                                  approximates geological contacts from the structural geological model, and minimizing the total number of
                                  elements for reasonable run-times.
                                      These objectives are achieved through a combination of a stratigraphic layering approach, where geological
                                  and model layers consistently coincide, and a block model, wherein all layers are horizontal with a specified
                                  thickness. The extents of geological units are assigned based on their intersection with the model elements. The
                                  model incorporates a three-layer configuration to represent the subsurface geological conditions accurately. The
                                  first layer has an average thickness of 6 m, ranging from 735.94 m to 729.94 m above mean sea level (amsl). The
                                  second layer is 24 m thick, extending from 729.94 m to 705.94 m amsl. The third layer ranges from 705.94 m to
                                  635.94 m amsl. The specific types of aquifers (confined or unconfined) within these layers have been detailed in
                                  Table 1. This layered structure is crucial for accurately simulating groundwater flow and contaminant transport
                                  dynamics across different depths. Figure 4 depicts the geometry of the resulting mesh, comprising 59.56 thousand
                                  active finite elements and containing 10.91 thousand active nodes.
                                  Structural geology
                                  The Ayad River Basin in Udaipur underwent an extensive geological examination, integrating diverse data
                                  sources, including the Geological Survey of India’s 1:50,000 scale map, Landsat-9 OLI-2 + PAN satellite imagery
                                  (15 m resolution), and SRTM DEM data (30 m resolution)75. The resultant geological map, presented in Fig. 5,
                                  offers insights into rock types, lithology, and lineaments. The analysis reveals a spectrum of rock types span-
                                  ning the Archaean to Upper Proterozoic eras, categorized into the Bhilwara, Aravalli, and Delhi s upergroups87.
                                  Notably, the Archaean-era Mangalwar Complex, representing the Bhilwara supergroup, is situated approximately
                                  55 km southwest of Chittorgarh88. The Gurali formation of the Debari group serves as a geological boundary,
                                  delineating the Bhilwara supergroup from the Aravalli supergroup89. The Aravalli Mountain range primarily
                                  comprises rocks from the Proterozoic-era Delhi Supergroup, with crystalline rocks from the Archaean age posi-
                                  tioned between various geological formations, including the BGC/Bhilwara group, Aravalli supergroup, Palaeo-
                                  Proterozoic cover sequences, and Delhi fold belt rocks, equivalent to those in the BGC group90. This collaborative
                                  use of geological maps, satellite imagery, and elevation data has yielded a comprehensive understanding of the
                                  Ayad River Basin’s geological composition, providing insights into its intricate and dynamic geological history.
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Figure 5. Geological map91, and lithologs cross-section92 of Ayad River Basin, Udaipur.
                                                Following the successful generation of the 3D mesh, the model layers offer an effective approximation of the
                                            structural geological model. To facilitate the subsequent assignment of parameter values in FEFLOW, various
                                            sets or selections of finite elements are established in the FEFLOW model. These selections within FEFLOW are
                                            formulated by utilizing elevation data from each aquifer layer (slice), specifying the upper and lower extents of
                                            the slice, and incorporating 3D triangulated data for intrusion-type model objects.
                                            Initial conditions
                                            Hydraulic head/water levels. The initial hydraulic head conditions for the transient modeling forecast are
                                            derived from a steady-state model run utilizing the parameter set specific to each scenario (Fig. 6).
                                            Nitrate, fluoride, and TDS contamination. The water quality parameters are examined to assess their conform-
                                            ity with the standards outlined by the World Health Organization (WHO), as delineated in Table 2. This rigorous
                                            evaluation is conducted to ascertain that the groundwater quality parameters align with the prescribed guide-
                                            lines, ensuring their compliance with recommended standards for safe drinking water.
                                                The spatial distribution maps of nitrate, fluoride, and Total Dissolved Solids (TDS) contamination in the Ayad
                                            River Basin were generated using the Inverse Distance Weighting (IDW) interpolation method in ArcGIS. IDW
                                            interpolation estimates values at unsampled locations based on the weighted average of nearby sampled values,
                                            where closer samples have higher influence. For this study, the average values of each contamination parameter
                                            from 2011 to 2022 were utilized. This method was chosen for its ability to effectively represent gradual changes
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Table 2. Standards according to WHO protocols and observed ranges and averages.
                                  in contamination levels across the basin, ensuring a continuous and spatially representative visualization of
                                  groundwater quality parameters. The spatial distribution of nitrate, fluoride, and TDS contamination in Ayad
                                  River Basin is sown in Fig. 7.
                                      The lower thresholds for nitrate, fluoride, and total dissolved solids (TDS) contamination have been estab-
                                  lished in accordance with the permissible limits defined by the World Health Organization (WHO). This meticu-
                                  lous adherence to WHO standards ensures that the specified levels for these contaminants align with globally
                                  recognized guidelines, emphasizing a comprehensive approach to groundwater quality assessment.
                                  Recharge. The model incorporates two distinct recharge systems: (i) diffusive (aerial) recharge applied at the
                                  surface. This recharge is implemented as an aerial source at the upper boundary of the model, representing
                                  net recharge. Rainfall data, obtained from three rain gauge stations in the Ayad River Basin, is utilized for this
                                  purpose, with model inputs derived through the thiessen polygons method based on these stations; (ii) recharge
                                  along drainage lines is depicted as a line source. Utilizing Shuttle Radar Topography Mission (SRTM) DEM data
                                  with 30 m spatial resolution (source: NASA Earth science data) and employing ArcGIS software, drainage lines
                                  are generated. All drainage lines are assumed to possess a uniform infiltration rate per unit length. The total net
Figure 7. Spatial distribution of nitrate, fluoride, and TDS contamination in Ayad River Basin, Udaipur.
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                                                   recharge is determined by the superposition of both effects. Each effect can be selected independently and has
                                                   undergone calibration.
                                                   Material parameters
                                                   Material parameters are allocated as constant values to the main formations outlined by the structural geological
                                                   model. This structure has been incorporated into the numerical model during the establishment of the hydrogeo-
                                                   logical structure. No additional zonation within the principal formation was introduced. This section elucidates
                                                   the assumptions and data sources utilized to derive the parameter values.
                                                   Hydraulic conductivity. FEFLOW facilitates the implementation of hydraulic conductivities in three distinct
                                                   axes to accommodate anisotropy. In the present model, the orientation of these primary axes aligns with the
                                                   main coordinate axes (Kxx, Kyy, and Kzz). The calibration process determines all hydraulic conductivity values
                                                   (Table 3; Fig. 8). The hydraulic conductivity in horizontal directions ( Kxx and K
                                                                                                                                      yy) is presumed to be isotropic
                                                   (Kxx and Kyy are identical) to streamline the degrees of freedom.
                                                   Specific yield and porosity. The principal parameters influencing porosity in the FEFLOW model include the
                                                   absolute porosity utilized in the flow model, referred to as "unsaturated porosity," and the porosity relevant to
                                                   mass transport, termed "mass-transport porosity." Within the context of the unsaturated flow model, FEFLOW
                                                   establishes saturation limits, defining both a residual saturation (lower limit) and a maximum saturation (upper
                                                   limit). These parameters collectively implicitly define specific yield. To streamline complexity, default values for
                                                   residual and maximum saturation (0.25% and 100%, respectively) are adopted, resulting in the negligible differ-
                                                   ence between absolute porosity and specific yield. The mass-transport porosity is assumed to be equal to specific
                                                   yield, with a lower limit imposed to ensure model stability. Parameter values are selected based on relevant
                                                   literature, with adherence to the LOM model principles whenever applicable. A detailed listing of these values
                                                   is provided in Table 4.
                                                   Unsaturated parametric model. The selection of the unsaturated model type necessitates the specification of
                                                   parameters governing the water retention curve and the relative reduction of hydraulic conductivity concerning
                                                   reduced saturation, encapsulated in the relative permeability relationship. At a regional scale, the significance
                                                   of these parameters is generally mitigated, provided that the chosen values facilitate the infiltration of applied
                                                   recharge. Consequently, a simplified van Genuchten m     odel95 has been employed for its pragmatic applicability.
                                                   This model entails three distinct fitting parameters: alpha is determined on an element-wise basis as the recipro-
                                                   cal of the layer thickness. The van Genuchten parameters are set to default values in FEFLOW, namely n = 1.964
                                                   and m = 0.4908. This selection aims to ensure numerical stability while closely approximating actual capillary
                                                   behavior. The relative permeability is configured to scale linearly with saturation, with the fitting parameter delta
                                                   set to unity. This approach has demonstrated efficacy in optimizing both model stability and computational
                                                   run times at the spatial scale under consideration. Typical parameters for a van Genuchten model are given in
                                                   Table 5.
                                                   Calibration
                                                   The model parameters pertinent to flow, namely hydraulic conductivity, and recharge, encompassing the assumed
                                                   head values at the reservoir and lakes, underwent calibration against mean water levels derived from a steady-
                                                   state model. The primary goal of the calibration process was to ascertain a parameter set that concurrently
                                                   meets the following criteria: (i) achieves a satisfactory fit between the model-derived water levels and observed
           Component                                                                  Parameters      Unit    Prior range           Initial value   Range of model evaluations        Calibrated value
                                                                                      Kxx             m/s      1 × 10−9–1 × 10−2 1 × 10−4          2.4 × 10−6–5.1 × 10−3         4.2 × 10−5
                                                                                      Kvy             m/s      1 × 10−9–1 × 10−2 1 × 10−7          1.0 × 10−5–9.9 × 10−3         6.1 × 10−4
           Geological layer-1 (sand/clay/silt/gravel) 0–6 m
                                                                                      Sy              –            0.00–0.35        0.15                    0.01–0.33                 0.26
                                                                                      Ss              1/m      1 × 10−9–1 × 10−2 9.94 × 10−5       5.6 × 10−5–7 × 10−4           8.6 × 10−5
                                                                                                                     −9        −2          −4                    −5           −8
                                                                                      Kxx             m/s      1 × 10 –1 × 10     1 × 10           9.9 × 10 –1.5 × 10            9.3 × 10−6
                                                                                                                     −9        −2          −7               −8          −6
           Geological layer-2 (weather and fractured: dolomitic limestone-sand-       Kvy             m/s      1 × 10 –1 × 10     1 × 10         1.7 × 10 –9.9 × 10              4.9 × 10−7
           stone/granite-phyllite) 6–30 m                                             Sy              –            0.00–0.35        0.1                      0.0–0.32                 0.16
                                                                                      Ss              1/m      1 × 10−9–1 × 10−2 6.89 × 10−4       7.0 × 10−5–5.3 × 10−4         2.2 × 10−4
                                                                                      Kxx             m/s      1 × 10−9–1 × 10−2 1 × 10−4          1.2 × 10−8–3.3 × 10−3         6.1 × 10−6
                                                                                      Kvy             m/s      1 × 10−9–1 × 10−2 1 × 10−7        1.1 × 10−8–9.4 × 10−4           3.6 × 10−7
           Geological layer-3 (compact: phyllite, granite, schist, gneiss) 30–100 m
                                                                                      Sy              –            0.00–0.35        0.02                    0.01–0.31                 0.04
                                                                                      Ss              1/m      1 × 10−9–1 × 10−2 3.68 × 10−6       5.9 × 10−7–4.9 × 10−6         4.1 × 10−6
                                                                                      Kxx = Horizontal hydraulic conductivity in X, Kvy = Horizontal hydraulic conductivity in Y, Sy = Specific yield,
           Where:
                                                                                      Ss = Specific storage
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Table 4. Porosity values (applied in base case scenarios). Source: Freeze et al.,94.
                                  regional long-term water levels; (ii) maintains consistency with the prevailing understanding of local and regional
                                  hydrogeological conditions.
                                  Steady‑state model setup. The model underwent an initial steady-state run, initially excluding the abstraction
                                  effects from pumps. For the subsequent transport model, an essential prerequisite was a reasonable approxima-
                                  tion of the initial conditions for nitrate, fluoride, and total dissolved solids (TDS) contaminations, which were
                                  incorporated into the model at the commencement of the run. A static concentration distribution for nitrate,
                                  fluoride, and TDS was employed, with a caveat that the mass transport model could not be entirely deacti-
                                  vated, as calibration necessitated consistency with the hydraulic head in the transient forecasting model. It was
                                  observed that variations in nitrate, fluoride, and TDS distributions yielded significant differences in steady-state
                                  water levels. Calibration procedures were executed employing a dual approach, combining automated inverse
                                  modeling facilitated by an algorithm for parameter estimation within the PEST uncertainty estimation software,
                                  alongside manual adjustments.
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                                            Table 5.  Typical van Genuchten model parameters (ά, n) including residual (θr), and saturated (θs) water
                                            contents compiles from the UNSODA database96. n indicates the number of soils or samples of a given textural
                                            class from which the mean values are compiled.
                                            Recharge. Diffuse recharge: Recharge is administered as a function of specified fractions relative to the assumed
                                            mean annual precipitation rates, which are 819 mm/year for Udaipur (Girwa), 575 mm/year for Badgaon, and
                                            1032 mm/year for Biliya. Distinct recharge factors are applied, delineating variations in the surface geological
                                            characteristics for the respective regions.
                                               Drainage lines: Additional recharge is introduced along the drainage lines prevalent in the model area.
                                            Consent to participate
                                            By participating in this research on "Groundwater Contamination Modeling in Ayad River Basin, Udaipur" I
                                            consent to the utilization of my data for academic purposes.
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Items                               Total number of wells      Overall mean error (ME)        Mean absolute error (MAE)         Root mean square error (RMSE)   R-squared value
Groundwater monitoring wells (m)    45                         9.32                           9.53                              12.40                           0.989
TDS contamination (mg/l)            8                          0.83%                          1.30%                              1.62%                          0.991
Nitrate contamination (mg/l)        8                          0.60%                          1.89%                              2.28%                          0.993
Fluoride contamination (mg/l)       8                          0.71%                          1.38%                              1.46&                          0.957
                                        Table 7.  Overall mean error (ME), mean absolute error (MAE), root mean square error (RMSE), and
                                        R-squared value for groundwater level, and TDS, nitrate, and fluoride contamination.
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                                            surpass established standard limits. The permissible limits are defined in accordance with the guidelines set
                                            forth by the WHO93.
                                                The execution of the prediction model was carried out without accounting for water abstraction through
                                            pumping activities. This baseline run serves the purpose of validating the quasi-steady state assumption con-
                                            cerning the initial distribution of Total Dissolved Solids (TDS), nitrate, and fluoride. The rationale behind this
                                            validation lies in assessing whether the TDS, nitrate, and fluoride distribution, established under quasi-steady
                                            state conditions, would remain relatively unchanged over an extended simulation period in the absence of
                                            pumping-induced disturbances. The baseline run provides insights into the displacement of TDS, nitrate, and
                                            fluoride resulting from natural water movement, allowing an evaluation of the assumption that the background
                                            water movement is insignificantly small compared to the TDS, nitrate, and fluoride movement induced by water
                                            production activities. This assumption neglects the effect of background movement, considering it to be negligible
                                            in comparison to the impact of TDS, nitrate, and fluoride movement attributed to water extraction. To ascertain
                                            the validity of this assumption, the prediction model was executed under natural, undisturbed conditions, ena-
                                            bling the observation and analysis of the background movement of TDS, nitrate, and fluoride within the system.
                                            Nitrate
                                            The nitrate contaminant transport model has been executed, mirroring the approach applied to the total dis-
                                            solved solids (TDS) contaminant transport model, spanning a 5-year period. Analysis of the forecasted data
                                            reveals compelling patterns when considering the permissible limit of 50 mg/l for nitrate. Noteworthy obser-
                                            vations include the 50 mg/l features extending approximately 340 m from the observation well in Srimali Ka
                                            Karia, Ramgiri, Savina, and Hariyab. In Bhoyana, the same feature reaches 240 m from the observation well,
                                            while in Undri, Sisarma, and Kanpur, the feature extends up to 500 m (Fig. 12). Although no explicit correlation
                                            with subsurface lithology is evident in the features pattern in all observation wells, a discernible influence of
                                            weathered/fractured rocks, characterized by varying hydraulic conductivity and porosity, is noted. The nitrate
                                            contaminants in all groundwater monitoring wells (observation wells) exhibit an eastward movement, aligning
                                            with the direction of groundwater flow.
                                                Upon analyzing the land use, temperature, and rainfall dynamics within the Ayad River Basin, a discernible
                                            positive correlation emerges between the percentage of cropland in a specific area and the concentration of nitrate
                                            in groundwater. Notably, environmental factors, including temperature and precipitation, play pivotal roles as
                                            co-factors in this relationship. Higher average temperatures exhibit an inversely proportional relationship with
                                            nitrate contamination in groundwater, a phenomenon potentially attributed to increased evapotranspiration
                                            processes. Concurrently, increased average precipitation serves to dilute nitrates within the soil, consequently
                                            leading to a reduction in groundwater nitrate concentration. These findings underscore the multifaceted inter-
                                            play between land use, climatic elements, and groundwater quality, offering valuable insights into the complex
                                            dynamics of nitrate contamination in the study area. The primary driver of nitrate contamination in the region
                                            is identified as the excessive use of chemical fertilizers. A crucial recommendation emerges to curtail this source
                                            of contamination, advocating for the adoption of natural (organic) fertilizers as a more sustainable alternative.
                                            This strategic shift aligns with the broader objective of mitigating nitrate contamination in the study area.
                                            Fluoride
                                            The fluoride contaminant transport model underwent a simulation analogous to the TDS and nitrate contami-
                                            nant transport models, spanning a 5-year period. Despite the permissible limit for fluoride contaminants in
                                            all groundwater monitoring wells (observation wells) being within the acceptable range of 4 mg/l93, there has
                                            been limited spatial movement observed. Over the 5-year modeling period, fluoride contaminant (4 mg/l) has
                                            extended up to 20 m from the observation wells, with a discernible eastward trend mirroring the groundwater
                                            flow (Fig. 13). The presence of fluoride in groundwater stems from the weathering and leaching of fluoride-
                                            bearing minerals within rocks and sediments.
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Figure 11. Contaminant transport model result for TDS (travel distance 5 years).
                                      Ingesting fluoride in modest amounts (< 0.5 mg/L) offers dental health benefits by reducing dental caries.
                                  However, higher concentrations (> 4 mg/L) may lead to fluorosis. While fluoride levels are currently low in Ayad
                                  River Basin, practical strategies should be developed to ensure the provision of fluoride-safe drinking water to
                                  rural communities in the region. This emphasizes the need for ongoing monitoring and mitigation efforts to
                                  safeguard public health in the face of potential fluctuations in fluoride concentrations.
                                  Sensitivity analysis
                                  Conducting a global sensitivity analysis necessitates the exploration of parameters at various levels, typically
                                  involving three distinct levels within the parameter space. Various strategies exist to achieve this objective, rang-
                                  ing from the manipulation of individual parameter values, as seen in the one-at-a-time (OAT) test plan, to the
                                  execution of extensive sets of random parameter values through Monte-Carlo Simulations. These methodologies
                                  differ in terms of numerical complexity, the labour-intensive nature of model establishment, and their effective-
                                  ness in discerning the sensitivity of parameters and their combinations103.
                                      The study employs the fractional factorial test design (FFD) method104. In this experimental design, all
                                  parameters are tested at three levels: base case, lower level, and upper level. This ensures that any primary effects
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Figure 12. Contaminant transport model result for nitrate (travel distance 5 years).
                                            of individual parameters remain unconfounded by combination effects of order two. A total of 27 scenarios are
                                            necessary to execute the test plan fully. For each of the 27 parameter sets outlined in the test plan, both a steady-
                                            state model (configured identically to the calibration model) and a contaminant transport model (configured
                                            similarly to the water quality assessment model) are generated.
                                                Initially, the steady-state model is executed, providing a hydraulic head distribution for assessing the model-
                                            to-measurement misfit compared to the calibrated base case. Scenarios with unacceptably large residuals, indicat-
                                            ing inconsistency with observed field data, are excluded from the sensitivity study. For scenarios demonstrating
                                            satisfactory calibration quality, the predictive run is conducted, utilizing the results of their respective steady-state
                                            models as initial hydraulic head conditions. As the test plan favors extreme parameter values, some sets may
                                            potentially strain the model beyond stability limits. Therefore, model scenarios undergo testing for numerical
                                            performance, and transient runs exhibiting unstable behavior are eliminated from the study.
                                                A series of steady-state scenarios were formulated and executed, with resulting water level distributions
                                            exported and compared to the primary calibration target. Each model’s calibration quality was classified based
                                            on the model-to-measurement misfit: (i) very good (residual generally less than 0.5 m), (ii) good (most residual
                                            around 1 m or below), (iii) okay (most residual around 2 m or below), (iv) acceptable (most residual around 3 m
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Figure 13. Contaminant transport model result for fluoride (travel distance 5 years).
                                  or below), (iv) moderate (most residual around 5 m or below), and (v) unacceptable (most residual exceeding
                                  5 m). Table 8 details the classification for each model run, guiding the rejection or acceptance decision.
                                  Conclusion
                                  A numerical model based on the groundwater modelling software FEFLOW has been developed with the pur-
                                  pose of estimating the expected water quality in the Ayad River Basin, and prediction the affected area over the
                                  next 5 years. This model meticulously evaluates the concentrations of total dissolved solutes (TDS), nitrate, and
                                  fluoride, crucial for irrigation and domestic water supply in the Ayad River Basin. The established threshold
                                  concentrations stand at 2000 mg/l for TDS, 50 mg/l for nitrate, and 4 mg/l for fluoride. Calibration of the model
                                  involved a comprehensive approach, relying on average steady-state water levels and incorporating prior knowl-
                                  edge of expected parameter values derived from aquifer test evaluations. Additionally, a thorough sensitivity
                                  analysis was executed to estimate the anticipated variations in model results due to inherent uncertainties associ-
                                  ated with parameter values. This analytical process aimed to pinpoint the influential parameters contributing to
                                  the observed variations, enhancing the model’s reliability and predictive capabilities.
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                                                      The calibrated steady-state model and contaminant transport model exhibit an impressive accuracy exceed-
                                                  ing 95%. According to the contaminant prediction model, TDS levels demonstrate a substantial increase in the
                                                  eastward direction across all locations. These discernible patterns in TDS distribution underscore the localized
                                                  hydrogeological influences, emphasizing the necessity for targeted interventions to mitigate the rapid escalation
                                                  of TDS levels, particularly in the eastern region of the study area. High levels of total dissolved solids (TDS),
                                                  nitrate, and fluoride contamination are prominently observed in the eastern and southeastern region of the
                                                  Ayad River Basin. This phenomenon can be attributed to the presence of two waste disposal sites, namely Titadi
                                                  and Baleecha. Titadi, a landfill in operation for four decades until its closure in 2010, still exhibits residual
                                                  waste covering an area of 32,000 m2. Concurrently, the initiation of a new dumping ground at Baleecha by the
                                                  Udaipur Municipal Corporation (UMC) post-2010 has contributed to the exacerbation of contamination in the
                                                  specified regions. Upon scrutinizing land use, temperature, and rainfall dynamics within the Ayad River Basin,
                                                  a notable positive correlation emerges between the percentage of cropland in a specific area and the concentra-
                                                  tion of nitrate in groundwater. The primary driver of nitrate contamination is attributed to the excessive use of
                                                  chemical fertilizers. A critical recommendation advocates curbing this contamination source by transitioning
                                                  to natural (organic) fertilizers as a more sustainable alternative. While fluoride levels are currently low in the
                                                  Ayad River Basin, practical strategies need development to ensure the provision of fluoride-safe drinking water
                                                  to rural communities in the region. This underscores the imperative for ongoing monitoring and mitigation
                                                  efforts to safeguard public health in anticipation of potential fluctuations in fluoride concentrations (Table 8).
                                                      The sensitivity analysis, conducted through the fractional factorial test design (FFD) method, encompassed
                                                  a total of 27 model-to-measurement fit scenarios. Out of these, 23 scenarios received acceptance, signifying that
                                                  water can be used for irrigation purposes. However, treatment is deemed necessary before considering the supply
                                                  for drinking purposes. This comprehensive analysis and decision-making framework contribute to informed
                                                  water management strategies.
                                                  • Sensor network deployment: should be set up a network of chemical sensors specifically designed to detect
                                                    various contaminants in groundwater, such as heavy metals, nitrates, TDS, fluoride, pesticides, or organic
                                                    pollutants. These sensors should be connected to FEFLOW model through MIKE OPERATIONS Web that
                                                    can collect and transmit real-time data to web. FEFLOW model should be run automatic every day at a
                                                    particular time and should be display the predictive modeling result on the MIKE OPERATIONS Web.
                                                  • Real-time monitoring and alerts: should be implemented a real-time monitoring system that continuously
                                                    analyzes the incoming data from the sensor network, and model prediction result. If the system detects any
                                                    sudden changes or anomalies in groundwater quality beyond specified thresholds, it should generate alerts
                                                    to notify relevant stakeholders, such as water resource management authorities or local communities.
                                                  • Mobile application: should be developed a user-friendly mobile application that allows individuals, such as
                                                    farmers or residents in affected areas, to access groundwater quality information in real-time. The applica-
                                                    tion can provide personalized recommendations for water usage, awareness about potential health risks, and
                                                    suggestions for alternative water sources if contamination is detected.
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                                  Data availability
                                  The datasets used and analysed during the current study available from the corresponding author on reasonable
                                  request.
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                                  Acknowledgements
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