Asadipour 2018
Asadipour 2018
https://doi.org/10.1007/s40199-018-0226-0
RESEARCH ARTICLE
Abstract
Background Fluoroquinolones (FQs) are compounds of major interest with broad antimicrobial activities against community and
hospital-acquired infections such as respiratory tract infections (nosocomial pneumonia, chronic bronchitis and tuberculosis),
skin and soft tissue infections, bone and joint infections, intra-abdominal infections and sexually transmitted diseases. This broad
range of activities along with favorable pharmacokinetic and low toxicity introduced this class of compounds as important
antimicrobial chemotherapy agents. The rapid increase in prevalence of FQs resistant microbes in environment motivated
medicinal chemists to discover new quinolone-based compounds with potent activities against Gram-positive bacteria.
Methods The designed compounds were prepared through the two-component reaction between aromatic α-haloketones or α-
halooximes and sarafloxacin in the presence of NaHCO3 in DMF, affording the corresponding N-[2-(aryl-3-yl) ethyl] piperazinyl
quinolone derivatives in good yields. All synthesized compounds were evaluated for antibacterial activities against Gram-
positive [Staphylococcus aureus ATCC 6538p, Micrococcus luteus, ATCC 1110, Staphylococcus epidermidis ATCC 12228
and Bacillus subtilis ATCC 6633] and Gram-negative [Escherichia coli ATCC 8739, Klebsiella pneumoniae ATCC 10031
Pseudomonas aeruginosa ATCC 9027 and Serratia marcescens PTCC 1111] bacteria.
Results The antibacterial activities of 24 new compounds were reported as MIC values in comparison to sarafloxacin. The most
active compound, 4 g, exhibited similar inhibitory activity against Gram-positive bacteria including S. aureus, S. epidermidis and
B. subtilis compared to positive control. Furthermore, benzyloxime incorporated derivatives (4 s-4x) showed poor activity against
all tested strains, except 4x.
Conclusion The obtained results indicated that the synthesized compounds containing substituted piperazine moiety at the C-7
position displayed same or weak inhibitory activities compared to sarafloxacin.
                                                                      Introduction
* Alireza Foroumadi
  aforoumadi@yahoo.com                                                The fatal infections caused by multiresistant pathogens have
1
                                                                      become the worldwide concern. In addition, the inappropriate
     Department of Medicinal Chemistry, Faculty of Pharmacy, Kerman   prescription and misuse of antibiotics which led to the in-
     University of Medical Sciences, Kerman, Iran
2
                                                                      creased rate of hospitalization, illness and death in patients
     Environmental Health Engineering Research Center, Kerman         have driven infectious disease to global health catastrophic
     University of Medical Sciences, Kerman, Iran
3
                                                                      threat. Therefore, the development of efficient, potent and
     Pharmaceutics Research Center, Institute of Neuropharmacology,   new compounds would be a highly desirable task [1–4].
     Kerman University of Medical Sciences, Kerman, Iran
4
                                                                         The wide spectrum of activities and compelling chemis-
     Drug Design and Development Research Center, The Institute of    try of quinolones have made this bicyclic core attractive for
     Pharmaceutical Sciences (TIPS), Tehran University of Medical
     Sciences, Tehran, Iran                                           researchers. The introduction of fluoroquinolones (FQs) as
5                                                                     antibacterial agents in 1960s eradicated the infections
     Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran
     University of Medical Sciences, Tehran, Iran                     caused by Gram-negative pathogens. Furthermore, the
                                                                                                                DARU J Pharm Sci
capability of new members to fight against Gram-positive         After consumption of sarafloxacin (3), monitored by TLC,
bacteria resulted in successfully introduction of the popular    water (20 mL) was added and the precipitate was filtered,
class of antibiotics into the market [5–8]. DNA gyrase,          washed with water. For further purification, the products were
topoisomerase IV and bacterial topoisomerase II enzymes          recrystallized from CH3OH/CHCl3 to afford target com-
are considered as targets of quinolone derivatives [9–13].       pounds 4a-x.
FQs consist of a 4-quinolone/naphthyridone-3-carboxylic
acid heterocyclic core, a fluorine atom and a secondary          6-Fluoro-1-(4-fluorophenyl)-4-oxo-7-(4-(2-oxo-2-phenylethyl)
amine group attached to the C-6 and -7 positions, respec-        piperazin-1-yl)-1,4-dihydroquinoline-3-carboxylic acid (4a)
tively. The ongoing researches on quinolone and its ana-
logues inaugurated nearly 10,000 analogues with promising        Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
antibacterial activities, opening up new horizons in the field   2.65 (bs, 4H, piperazine), 3.07 (bs, 4H, piperazine), 3.37 (s,
of antibacterial chemotherapy [14, 15]. The C-7 position         2H), 6.39 (d, 4JH-F = 7.5 Hz, 1H, aromatic), 7.30–7.33 (m, 3H,
was subjected to various changes with hopes to find more         aromatic), 7.52–7.58 (m, 3H, aromatic), 7.78–7.79 (m, 3H,
potent and effective agents. Based on the previous exten-        aromatic), 7.98 (d, 3JH-F = 13 Hz, 1H, aromatic), 8.64 (s, 1H,
sive research in this field, the basic character of this posi-   aromatic), 11.35 (s, 1H, COOH).. IR (KBr cm−1), ṽ = 3580–
tion is significantly related to the observed activity against   3300 (OH), 1722, 1672, 1622 (C=O). Anal. Calcd. For
DNA gyrase [16]. The lipophilicity of fluoroquinolones           C28H23F2N3O4: C: 66.79; H: 4.60; N: 8.35; Found: C:
plays an important role in the penetration of these com-         66.50; H: 4.82; N: 8.15.
pounds into bacterial cells, indicating that increasing the
lipophilic character at C-7 position may increase their ac-      6-Fluoro-1-(4-fluorophenyl)-7-(4-(2-(4-fluorophenyl)
tivity. In this regard, the presence of a bulky group at the     -2-oxoethyl)piperazin-1-yl)
N-4 position of piperazine is permitted. Therefore, different    -4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4b)
derivatives containing 2-oxoethyl or 2-oximinoethyl deriva-
tive attached to the piperazine ring at C-7 position were        Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
synthesized [13]. In addition, the attachment of thiophene       2.63–2.67 (m, 4H, piperazine), 3.05–3.10 (m, 4H, piperazine),
[17, 18], furan [19], substituted phenyl [20] and coumarin       3.86 (s, 2H), 6.39 (d, 3JH-F = 7.5 Hz, 1H, aromatic), 7.32 (t,
[21, 22] to piperazine ring was also investigated by our         J = 9 Hz, 2H, aromatic), 7.52 (t, J = 8.5 Hz, 2H, aromatic),
research team. In continuation of our expertise in this field    7.76–7.79 (m, 2H, aromatic), 7.97 (d, J = 13 Hz, 1H, aromat-
[23–25], we report some novel analogues of sarafloxacin 3,       ic), 8.05–8.08 (m, 2H, aromatic), 8.62 (s, 1H, aromatic), 11.21
possessing α-haloketones- (1a-f), hydroxyimino- (2 g-l),         (s, 1H, COOH). IR (KBr cm−1), ṽ = 3580–3300 (OH), 1716,
methoxyimino- (2 m-r) and benzyloxyimino (2 s-x)-func-           1661, 1618 (C=O). 13C-NMR (125 MHz, DMSO-d6) δ
tionalized piperazine as C-7 substituents and evaluate their     (ppm): 49.0, 52.0 (CH2 piperazine), 63.4 (CH2), 106.4,
antibacterial activity against Gram-positive and Gram-           107.2, 111.0 (d, 3 J C-F = 23.75 Hz), 115.5 (d, 3 J C-F =
negative bacteria.                                               21.25 Hz), 117.2 (d, 3JC-F = 22.5 Hz), 119.0, 121.3, 129.8
                                                                 (d, 1JC-F = 7.5 Hz), 131.2 (d, 1JC-F = 8.75 Hz), 132.4, 136.1,
                                                                 139.1, 145.2, 148.6, 152.0, 154.0, 165.7 (COOH), 176.6
Methods                                                          (C=O), 195.4. Anal. Calcd. For C28H22F3N3O4: C: 64.49; H:
                                                                 4.25; N: 8.06; C: 64.72; H: 4.47; N: 7.85.
Materials
                                                                 7-(4-(2-(4-Chlorophenyl)-2-oxoethyl)piperazin-1-yl)
All chemicals and solvents were obtained from Merck and          -6-fluoro-1-(4-fluorophenyl)
Aldrich and used without further purification. Melting points    -4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4c)
were determined on a Kofler hot stage apparatus and are uncor-
rected. Shimadzu 470 spectrophotometer (potassium bromide        Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
disks) was used to record the IR spectra. 1H- and 13C-NMR        2.63–2.68 (m, 4H, piperazine), 3.06–3.12 (m, 4H, piperazine),
spectra were recorded on Bruker FT-500 (Germany), using          3.86 (s, 2H), 6.39 (d, 4JH-F = 7.5 Hz, 1H, aromatic), 7.52 (t,
TMS as an internal standard. Elemental analyses were mea-        J = 8 Hz, 2H, aromatic), 7.57 (d, J = 8.5 Hz, 2H, aromatic),
sured by CHN-O-rapid elemental analyzer (GmbH-Germany).          7.76–7.79 (m, 2H, aromatic), 7.96–8.02 (m, 3H, aromatic),
                                                                 8.62 (s, 1H, aromatic), 10.20 (s, 1H, COOH). IR (KBr
General procedure for the synthesis of compounds 4a-x A          cm−1), ṽ = 3590–3300 (OH), 1725, 1679, 1619 (C=O). 13C-
mixture of compounds (1a-f) or (2 g-x) (0.55 mmol),              NMR (125 MHz, DMSO-d6) δ (ppm): 48.9, 51.9 (CH2 piper-
sarafloxacin (3) (0.5 mmol) and NaHCO3 (0.5 mmol) in             azine), 63.3 (CH2), 106.3, 107.0, 111.0 (d, 3JC-F = 22.5 Hz),
DMF (5 mL) was stirred at room temperature for 3–7 days.         117.1 (d, 3JC-F = 22.5 Hz), 119.0, 128.5, 129.7, 129.9 (d, 1JC-
DARU J Pharm Sci
                                                                                          3
F = 7.5Hz), 130.0, 134.1, 136.1, 138.0, 139.1, 145.2, 149.3,       F = 22.5 Hz), 117.2 (d, JC-F = 22.5 Hz), 119.0, 127.4, 129.8
                                                                       1
153.7, 165.6 (COOH), 178.1 (C=O), 196.6. Anal. Calcd. For          (d, JC-F = 7.5 Hz), 130.7, 131.0, 136.1, 139.1, 139.8, 146.0,
C28H22ClF2N3O4: C: 62.52; H: 4.12; N: 7.81; C: 62.80; H:           148.7, 154.0, 161.2, 162.2, 165.8 (COOH), 177.3 (C=O),
4.39; N: 7.59.                                                     196.6. Anal. Calcd. For C28H21Cl2F2N3O4: C: 58.75; H:
                                                                   3.70; N: 7.34; C: 59.00; H: 3.47; N: 7.64.
7-(4-(2-(4-Bromophenyl)-2-oxoethyl)piperazin-1-yl)
-6-fluoro-1-(4-fluorophenyl)                                       6-Fluoro-1-(4-fluorophenyl)-7-(4-(2-(hydroxyimino)
-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4d)                 -2-phenylethyl)piperazin-1-yl)
                                                                   -4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4 g)
Off-white powder, 1H-NMR (500 MHz, DMSO-d6 ) δ
(ppm): 2.30–2.35 (m, 4H, piperazine), 3.01–3.07 (m, 4H,            Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
piperazine), 3.30 (s, 2H), 6.39 (d, 4JH-F = 6 Hz, 1H, aromat-      2.98 (bs, 8H, piperazine), 3.65 (s, 2H), 6.37 (s, 1H, aromatic),
ic), 7.53–7.54 (m, 2H, aromatic), 7.74–7.79 (m, 3H, aromat-        7.34–7.40 (m, 3H, aromatic), 7.51–7.58 (m, 3H, aromatic),
ic), 7.83 (s, 1H, aromatic), 7.88–7.93 (m, 2H, aromatic),          7.75–7.80 (m, 3H, aromatic), 7.95 (d, 3JH-F = 13 Hz, 1H, aro-
8.01–8.03 (m, 1H, aromatic), 8.64 (s, 1H, aromatic), 10.66         matic), 8.62 (s, 1H, aromatic), 10.96 (s, 1H, NOH), 11.44 (s,
(s, 1H, COOH). IR (KBr cm−1), ṽ = 3580–3300 (OH), 1722,            1H, COOH). IR (KBr cm−1), ṽ = 3580–3300 (OH), 1718,
1666, 1621 (C=O). 13C-NMR (125 MHz, DMSO-d6) δ                     1618 (C=O). 13C-NMR (125 MHz, DMSO-d6) δ (ppm):
(ppm): 49.1, 52.0 (CH2 piperazine), 63.0 (CH2), 106.5,             49.8, 52.0 (CH2 piperazine), 61.2 (CH2), 106.5, 107.4, 110.9
107.3, 111.0 (d, 1 J C-F = 23.75 Hz), 117.2 (d, 3 J C-F =          (d, 3JC-F = 23.75 Hz), 117.2 (d, 3JC-F = 23.75 Hz), 119.0,
22.5 Hz), 119.0, 128.0, 128.6, 129.5, 129.8 (d, 1JC-F =            126.1, 127.7, 128.4 (d, 1JC-F = 7.5 Hz), 129.8, 133.5, 136.1,
7.5 Hz), 133.4, 136.4, 139.4, 146.2, 148.8, 152.5, 154.0,          139.1, 145.1, 148.6, 152.6, 155.0, 161.5 (C=N), 165.7
165.8 (COOH), 176.8 (C=O), 197.3. Anal. Calcd. For                 (COOH), 176.6 (C=O). Anal. Calcd. For C28H24F2N4O4: C:
C28H22BrF2N3O4: C: 57.74; H: 3.81; N: 7.22; C: 58.00;              64.86; H: 4.67; N: 10.81; C: 65.09; H: 4.40; N: 11.03.
H: 3.54; N: 7.59.
                                                                   6-Fluoro-1-(4-fluorophenyl)-7-(4-(2-(4-fluorophenyl)
6-Fluoro-1-(4-fluorophenyl)-4-oxo-7-(4-(2-oxo-2-(p-tolyl)          -2-(hydroxyimino)ethyl)piperazin-1-yl)
ethyl)piperazin-1-yl)-1,4-dihydroquinoline-3-carboxylic acid       -4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4 h)
(4e)
                                                                   Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
Off-white powder, H-NMR (500 MHz, DMSO-d6) δ (ppm):
                   1
                                                                   2.97–3.04 (m, 4H, piperazine), 3.17–3.21 (m, 4H, piperazine),
2.39 (s, 3H, CH3), 2.64 (bs, 4H, piperazine), 3.01 (bs, 4H,        3.65 (s, 2H), 6.36 (s, 1H, aromatic), 7.41 (t, 3JH-F = 13 Hz, 1H,
piperazine), 3.84 (s, 2H), 6.39 (d, 4JH-F = 7 Hz, 1H, aromatic),   aromatic), 7.51–7.53 (m, 3H, aromatic), 7.64 (d, J = 7.5 Hz,
7.30 (d, J = 8 Hz, 2H, aromatic), 7.50–7.53 (m, 2H, aromatic),     1H, aromatic), 7.76 (s, 3H, aromatic), 7.95 (d, J = 12 Hz, 1H,
7.76 (d, J = 7.5 Hz, 2H, aromatic), 7.87 (t, J = 6.5 Hz, 2H,       aromatic), 8.62 (s, 1H, aromatic), 11.14 (s, 1H, NOH), 11.57
aromatic), 7.96 (d, 3JH-F = 12.5 Hz, 1H, aromatic), 8.61 (s,       (s, 1H, COOH). IR (KBr cm−1), ṽ = 3585–3300 (OH), 1720,
1H, aromatic), 11.77 (s, 1H, COOH).. IR (KBr cm −1),               1620 (C=O). Anal. Calcd. For C28H23F3N4O4: C: 62.68; H:
ṽ = 3580–3300 (OH), 1716, 1661, 1618 (C=O). Anal. Calcd.           4.32; N: 10.44; C: 62.40; H: 4.05; N: 10.63.
For C29H25F2N3O4: C: 67.30; H: 4.87; N: 8.12; C: 67.55; H:
7.51; N: 8.39.                                                     7-(4-(2-(4-Chlorophenyl)-2-(hydroxyimino)ethyl)
                                                                   piperazin-1-yl)-6-fluoro-1-(4-fluorophenyl)
7-(4-(2-(2,4-Dichlorophenyl)-2-oxoethyl)piperazin-1-yl)            -4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4i)
-6-fluoro-1-(4-fluorophenyl)
-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4f)                 Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ
                                                                   (ppm): 2.70–2.79 (m, 4H, piperazine), 3.06–3.11 (m, 4H,
Off-white powder, 1H-NMR (500 MHz, DMSO-d6 ) δ                     piperazine), 3.87 (s, 2H), 6.42 (d, 4JH-F = 7 Hz, 1H, aro-
(ppm): 2.62 (bs, 4H, piperazine), 3.02 (bs, 4H, piperazine),       matic), 7.53 (t, J = 8 Hz, 2H, aromatic), 7.57 (d, J = 8.5 Hz,
3.76 (s, 2H), 6.38 (d, 4JH-F = 7 Hz, 1H, aromatic), 7.54–7.58      1H, aromatic), 7.68 (d, J = 8.5 Hz, 1H, aromatic), 7.73–
(m, 3H, aromatic), 7.72–7.84 (m, 3H, aromatic), 7.96 (d,           7.80 (m, 2H, aromatic), 7.92 (d, 3JH-F = 13 Hz, 1H, aromat-
3
 JH-F = 13 Hz, 1H, aromatic), 8.00 (t, J = 7.5 Hz, 1H, aro-        ic), 7.97–8.02 (m, 2H, aromatic), 8.63 (s, 1H, aromatic),
matic), 8.63 (s, 1H, aromatic), 12.10 (s, 1H, COOH).. IR           11.14 (s, 1H, NOH), 11.57 (s, 1H, COOH). IR (KBr
(KBr cm−1), ṽ = 3585–3300 (OH), 1720, 1680, 1620 (C=O).            cm−1), ṽ = 3600–3300 (OH), 1719, 1620 (C=O). 13C-
13
  C-NMR (125 MHz, DMSO-d6) δ (ppm): 48.9, 51.8 (CH2                NMR (125 MHz, DMSO-d6) δ (ppm): 49.7, 51.9 (CH2
piperazine), 65.8 (CH2), 104.3, 106.6, 107.8, 111.0 (d, 3JC-       piperazine), 61.0 (CH2), 106.5, 107.3, 111.0 (d, 3JC-F =
                                                                                                                DARU J Pharm Sci
23.75 Hz), 117.2 (d, 3JC-F = 22.5 Hz),127.7, 128.0, 129.8         1H, aromatic), 7.70–7.77 (m, 2H, aromatic), 7.96 (d, 3JH-
(d, 1JC-F = 10 Hz), 130.4, 133.1, 134.7, 136.1, 139.1, 145.1,     F = 13 Hz, 1H, aromatic), 8.63 (s, 1H, aromatic), 11.15 (s,
148.6, 151.9, 155.0, 161.6 (C=N), 165.7 (COOH), 176.6             1H, NOH), 11.48 (s, 1H, COOH). IR (KBr cm −1 ),
(C=O). Anal. Calcd. For C28H23ClF2N4O4: C: 60.82; H:              ṽ = 3580–3300 (OH), 1716, 1618 (C=O). 13 C-NMR
4.19; N: 10.13; C: 60.63; H: 3.89; N: 10.40.                      (125 MHz, DMSO-d6) 훅 (ppm): 49.0, 52.1 (CH2 pipera-
                                                                  zine), 61.0 (CH2), 106.5, 107.3, 111.4 (d, 3JC-F = 22.5 Hz),
7-(4-(2-(4-Bromophenyl)-2-(hydroxyimino)ethyl)                    117.3 (d, 3JC-F = 22.5 Hz), 119.0, 127.1, 128.6, 128.2,
piperazin-1-yl)-6-fluoro-1-(4-fluorophenyl)                       129.8 (d, 1JC-F = 7.5 Hz), 131.2, 133.4, 136.1, 139.1 (2C),
-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4j)                146.1, 148.7, 152.0, 154.0, 161.5 (C=N), 165.7 (COOH),
                                                                  176.6 (C=O). Anal. Calcd. For C28H22Cl2F2N4O4: C:
Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):              57.25; H: 3.78; N: 9.54; C: 57.00; H: 3.98; N: 9.21.
2.98–3.05 (m, 4H, piperazine), 3.17–3.22 (m, 4H, piperazine),
3.69 (s, 2H), 6.36 (d, 4JH-F = 7 Hz, 1H, aromatic), 7.55–7.56
(m, 2H, aromatic), 7.96–7.74 (m, 3H, aromatic), 7.58 (s, 1H,      6-Fluoro-1-(4-fluorophenyl)-7-(4-(2-(methoxyimino)
aromatic), 7.90–7.95 (m, 2H, aromatic), 8.03 (t, J = 7 Hz, 1H,    -2-phenylethyl)piperazin-1-yl)
aromatic), 8.63 (s, 1H, aromatic), 11.19 (s, 1H, NOH), 11.60      -4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4 m)
(s, 1H, COOH). IR (KBr cm−1), ṽ = 3590–3300 (OH), 1725,
1619 (C=O). 13C-NMR (125 MHz, DMSO-d6) δ (ppm): 49.0,             Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ
52.2 (CH2 piperazine), 61.0 (CH2), 106.5, 107.3, 111.0, 117.2     (ppm): 2.90–3.00 (m, 8H, piperazine), 3.64 (s, 2H), 3.90
(d, 3JC-F = 22.5 Hz), 119.0, 122.0, 128.2, 129.8 (d, 1JC-F =      (s, 3H, NOCH3), 6.35 (d, 4JH-F = 7 Hz, 1H, aromatic),
7.5 Hz), 130.6, 131.0, 136.1, 139.1, 145.1, 148.6, 152.0,         7.36–7.39 (s, 3H, aromatic), 7.50 (t, J = 8.5 Hz, 2H, aro-
155.1, 161.2 (C=N), 165.7 (COOH), 176.6 (C=O). Anal.              matic), 7.73–7.75 (m, 4H, aromatic), 7.96 (d, 3JH-F =
Calcd. For C28H23BrF2N4O4: C: 56.29; H: 3.88; N: 9.38; C:         13.5 Hz, 1H, aromatic), 8.62 (s, 1H, aromatic), 15.14 (s,
56.03; H: 3.59; N: 9.54.                                          1H, COOH). IR (KBr cm−1), ṽ = 3625–3250 (OH), 1724,
                                                                  1623 (C=O). 13C-NMR (125 MHz, DMSO-d6) δ (ppm):
6-Fluoro-1-(4-fluorophenyl)-7-(4-(2-(hydroxyimino)-2-(p-tolyl)    49.0, 50.4 (CH2 piperazine), 52.2 (CH2), 61.7 (OCH3),
ethyl)piperazin-1-yl)-4-oxo-1,4-dihydroquinoline-3-carboxylic     106.2, 107.1, 111.1 (d, 3JC-F = 23.75 Hz), 117.2 (d, 3JC-
                                                                                                                        1
acid (4 k)                                                        F = 23.75 Hz), 118.0, 126.5, 128.1, 129.0, 129.8 (d, JC-
                                                                  F = 8.75 Hz), 134.8, 136.1, 139.1, 146.0, 146.8, 152.0,
Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):              153.9, 163.7 (C=N), 165.8 (COOH), 176.8 (C=O). Anal.
2.23 (s, 3H), 2.92–3.09 (m, 8H, piperazine), 3.61 (s, 2H), 6.36   Calcd. For C29H26Cl2F2N4O4: C: 65.41; H: 4.92; N: 10.52;
(d, 4JH-F = 7.5 Hz, 1H, aromatic), 7.32 (d, J = 8 Hz, 2H, aro-    C: 65.19; H: 5.11; N: 10.80.
matic), 7.53–7.65 (m, 2H, aromatic), 7.78 (d, J = 7.5 Hz, 2H,
aromatic), 7.89 (t, J = 7.5 Hz, 2H, aromatic), 7.96 (d, 3JH-F =
13 Hz, 1H, aromatic), 8.64 (s, 1H, aromatic), 11.12 (s, 1H,       6-Fluoro-1-(4-fluorophenyl)-7-(4-(2-(4-fluorophenyl)
NOH), 11.40 (s, 1H, COOH). IR (KBr cm−1), ṽ = 3590–3300           -2-(methoxyimino)ethyl)piperazin-1-yl)
(OH), 1719, 1618 (C=O). 13C-NMR (125 MHz, DMSO-d6) δ              -4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4n)
(ppm): 20.8 (CH3), 47.0, 49.0 (CH2 piperazine), 52.4 (CH2),
106.5, 107.4, 111.0 (d, 3JC-F = 23.75 Hz), 117.3 (d, 3JC-F =      Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
22.5 Hz), 119.1, 126.1, 128.8, 129.9 (d, 1JC-F = 7.5 Hz),         2.90–2.99 (m, 8H, piperazine), 3.63 (s, 2H), 3.90 (s, 3H,
131.5, 133.5, 136.1, 139.1, 143.1, 148.8, 150.0, 154.5,           NOCH3), 6.35 (d, 4JH-F = 6.5 Hz, 1H, aromatic), 7.19–7.21
161.6 (C=N), 165.7 (COOH), 176.7 (C=O). Anal. Calcd.              (m, 2H, aromatic), 7.51–7.53 (m, 2H, aromatic), 7.77–7.79
For C29H26F2N4O4: C: 65.41; H: 4.92; N: 10.52; C: 65.18;          (m, 4H, aromatic), 7.96 (d, 3JH-F = 12.5 Hz, 1H, aromatic),
H: 5.19; N: 10.82.                                                8.62 (s, 1H, aromatic), 15.10 (s, 1H, COOH). IR (KBr
                                                                  cm−1), ṽ = 3600–3250 (OH), 1713, 1619 (C=O). 13C-NMR
7-(4-(2-(2,4-Dichlorophenyl)-2-(hydroxyimino)ethyl)               (125 MHz, DMSO-d6) δ (ppm): 49.0, 50.4 (CH2 piperazine),
piperazin-1-yl)-6-fluoro-1-(4-fluorophenyl)                       52.1 (CH2), 61.8 (OCH3), 106.7, 107.7, 111.1 (d, 3JC-F =
-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4 l)               23.75 Hz), 115.0 (d, 3JC-F = 23.75 Hz), 117.2 (d, 3JC-F =
                                                                  23.75 Hz), 122.1, 128.8 (d, 1JC-F = 8.75 Hz), 129.8 (d, 1JC-
Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ                     F = 8.75 Hz), 131.2, 136.2, 139.4 (2C), 146.0, 148.6, 153.0,
(ppm): 2.98–3.19 (m, 8H, piperazine), 3.65 (s, 2H), 6.37          158.2, 161.8 (C=N), 176.4 (COOH), 179.6 (C=O). Anal.
(s, 1H, aromatic), 7.26 (m, 1H, aromatic), 7.43–7.48 (m,          Calcd. For C29H25F3N4O4: C: 63.27; H: 4.58; N: 10.18; C:
1H, aromatic), 7.52 (t, J = 5.5 Hz, 2H, aromatic), 7.63 (s,       63.01; H: 4.84; N: 9.94.
DARU J Pharm Sci
7-(4-(2-((Benzyloxy)imino)-2-(4-chlorophenyl)ethyl)               129.8 (d, 1JC-F = 8.75 Hz), 132.2,136.3, 137.8, 138.6, 140.5,
piperazin-1-yl)-6-fluoro-1-(4-fluorophenyl)                       145.5, 148.9, 151.2, 154.9, 163.0 (COOH), 169.0 (C=N),
-4-oxo-1,ν4-dihydroquinoline-3-carboxylic acid (4u)               173.0 (C=O). Anal. Calcd. For C36H32F2N4O4: C: 69.44; H:
                                                                  5.18; N: 9.00; C: 69.62; H: 5.41; N: 9.22.
Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
2.84–2.90 (m, 4H, piperazine), 2.92–3.00 (m, 4H, piperazine),
                                                                  7-(4-(2-((Benzyloxy)imino)-2-(2,4-dichlorophenyl)ethyl)
3.68 (s, 2H), 5.23 (s, 2H, NOCH2), 6.33 (d, 4JH-F = 7 Hz, 1H,
                                                                  piperazin-1-yl)-6-fluoro-1-(4-fluorophenyl)
aromatic), 7.31 (d, J = 8 Hz, 2H, aromatic), 7.36–7.42 (m, 4H,
                                                                  -4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4x)
aromatic), 7.47–4.53 (m, 2H, aromatic), 7.62 (d, J = 7.5 Hz,
2H, aromatic), 7.73–7.79 (m, 2H, aromatic), 7.96 (d, 3JH-F =
                                                                  Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
12.5 Hz, 1H, aromatic), 8.08 (s, 1H, aromatic), 8.62 (s, 1H,
                                                                  2.62 (bs, 4H, piperazine), 3.02–3.08 (m, 4H, piperazine), 3.58
aromatic), 15.12 (s, 1H, COOH). IR (KBr cm−1), ṽ = 3580–
                                                                  (s, 2H), 5.16 (s, 2H, NOCH2), 6.44 (d, 4JH-F = 7 Hz, 1H,
3300 (OH), 1718, 161 (C=O). Anal. Calcd. For
                                                                  aromatic), 7.37 (d, J = 7 Hz, 1H, aromatic), 7.53 (t, 3JH-F =
C35H29ClF2N4O4: C: 65.37; H: 4.55; N: 8.71; C: 65.10; H:
                                                                  6.5 Hz, 2H, aromatic), 7.63 (d, J = 9 Hz, 1H, aromatic), 7.72–
4.41; N: 8.94.
                                                                  7.78 (m, 5H, aromatic), 7.96–8.01 (m, 3H, aromatic), 8.01 (s,
                                                                  1H, aromatic), 8.63 (s, 1H, aromatic), 12.85 (s, 1H, COOH).
7-(4-(2-((Benzyloxy)imino)-2-(4-bromophenyl)ethyl)
                                                                  IR (KBr cm−1), ṽ = 3580–3300 (OH), 1715, 1619 (C=O). 13C-
piperazin-1-yl)-6-fluoro-1-(4-fluorophenyl)
                                                                  NMR (125 MHz, DMSO-d6) δ (ppm): 45.0, 49.0 (CH2 piper-
-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4v)
                                                                  azine), 51.7 (CH2), 76.0 (OCH2), 106.8, 111.1 (d, 3JC-F =
                                                                  22.5 Hz), 117.9 (d, 3JC-F = 22.5 Hz), 119.0, 128.3, 130.6,
Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):
                                                                  129.8 (d, 1JC-F = 8.75 Hz), 132.2, 132.2, 136.3, 137.8,
2.92–3.09 (m, 8H, piperazine), 3.67 (bs, 2H), 5.19 (s, 1H,
                                                                  138.6, 146.0, 148.9, 151.2, 154.9, 166.1 (COOH), 172.0
NOCH2), 6.33 (s, 1H, aromatic), 7.36–7.42 (m, 4H, aromatic),
                                                                  (C=N), 176.43 (C=O). Anal. Calcd. For C35H28Cl2F2N4O4:
7.51–7.55 (m, 4H, aromatic), 7.67 (d, J = 8 Hz, 2H, aromatic),
                                                                  C: 62.05; H: 4.17; N: 8.27; C: 62.32; H: 4.36; N: 8.55.
7.76–7.79 (m, 2H, aromatic), 7.94 (d, 3JH-F = 12 Hz, 1H, aro-
matic), 8.09–8.11 (m, 2H, aromatic), 8.62 (s, 1H, aromatic),
15.10 (s, 1H, COOH). IR (KBr cm−1), ṽ = 3580–3300 (OH),
1712, 1620 (C=O). 13C-NMR (125 MHz, DMSO-d6) δ                    Pharmacology
(ppm): 48.9, 50.3 (CH 2 piperazine), 52.1 (CH 2 ), 75.8
(OCH2), 106.4, 107.3, 111.0 (d, 3JC-F = 23.5 Hz), 117.2 (d,       Conventional agar-dilution method was used to determine the
3
 JC-F = 23.75 Hz), 118.0, 122.5, 127.8, 128.1, 128.3, 128.6,      minimum inhibitory concentrations (MIC) of the synthesized
129.1, 129.8 (d, 1JC-F = 7.5 Hz), 131.1, 133.9, 136.1, 137.4,     compounds (4a-x), according to previously reported method
139.1, 146.0, 148.8, 153.6, 163.0 (C=N), 165.6 (COOH),            [26]. The results of antibacterial testing of N-[2-(aryl-3-yl)
177.1 (C=O). Anal. Calcd. For C35H29BrF2N4O4: C: 61.14;           ethyl] piperazinyl quinolones 4 and their oxime derivatives
H: 4.25; N: 8.15; C: 61.33; H: 4.01; N: 8.32.                     (4 g-x) against a panel of selected Gram-positive
                                                                  [Staphylococcus aureus ATCC 6538p, Micrococcus luteus,
7-(4-(2-((Benzyloxy)imino)-2-(p-tolyl)ethyl)piperazin-1-yl)       ATCC 1110, Staphylococcus epidermidis ATCC 12228,
-6-fluoro-1-(4-fluorophenyl)                                      Bacillus subtilis ATCC 6633], and Gram-negative
-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (4w)                [Escherichia coli ATCC 8739, Klebsiella pneumoniae
                                                                  ATCC 10031 and Pseudomonas aeruginosa ATCC 9027,
Off-white powder, 1H-NMR (500 MHz, DMSO-d6) δ (ppm):              Serratia marcescens PTCC 1111] bacteria are reported in
2.23 (s, 3H, CH3), 2.99–3.11 (m, 4H, piperazine), 2.84–2.89       Table 2, compared to the reference drug sarafloxacin.
(m, 4H, piperazine), 3.64 (s, 2H), 5.35 (s, 2H, NOCH2), 6.20         Two-fold dilution of compounds 4a-x and positive control
(d, 4JH-F = 7 Hz, 1H, aromatic), 7.08 (d, J = 8 Hz, 1H, aromat-   were done by dissolving 6.4 mg in dimethylsulfoxide
ic), 7.15 (d, J = 7 Hz, 1H, aromatic), 7.28–7.35 (m, 4H, aro-     (DMSO; 1 mL), which were diluted with water (9 mL) and
matic), 7.38 (t, 3JH-F = 7 Hz, 2H, aromatic), 7.47–7.50 (m, 3H,   added to molten Mueller-Hinton (MH) agar to give a final
aromatic), 7.59–7.63 (m, 2H, aromatic), 7.77 (d, 3JH-F =          concentration of 64, 32, 16, 8, 4, 2, 1, 0.5, 0.25, 0.13, 0.06,
13 Hz, 1H, aromatic), 8.04 (s, 1H, aromatic), 11.02 (s, 1H,       0.03, 0.015, 0.0075 and 0.00375 μg/mL−1. Petri dishes were
COOH). IR (KBr) cm−1; ν 3580–3300 (COOH), 1726, 1620              incubated with 1–5 × 104 colony forming units (cfu) at 35–
(C=O). 13C-NMR (125 MHz, DMSO-d6) δ (ppm): 20.7                   37 °C and examined after 18 h. The lowest concentration of
(CH 3 ), 49.0, 50.4 (CH 2 piperazine), 52.3 (CH 2 ), 75.7         the agent, which completely led to the visible growth inhibi-
(OCH2), 106.3, 108.8, 111.8 (d, 3JC-F = 23.75 Hz), 117.9 (d,      tion on the Petri dish of the microorganisms was determined
3
 JC-F = 23.75 Hz), 121.5, 126.4, 127.8, 128.1, 128.2, 128.7,      as the minimum inhibitory concentration (MIC).
DARU J Pharm Sci
                                       1                 2
                  Compd.             R                 R                    Y            mp (oC)        Yield (%)a       Reaction
                                                                                                                       time (days)
                      4a             H                 H               O                 190-192            31              4
                      4b             F                 H               O                 197-199            48              3
                      4c             Cl                H               O                 199-200            36              3
                      4d             Br                H               O                 193-194            46              3
                      4e            CH3                H               O                 200-201            35              3
                      4f             Cl                Cl              O                 195-197            41              3
                      4g             H                 H              NOH                205-208            52              4
                      4h             F                 H              NOH                217-220            60              3
                       4i            Cl                H              NOH                211-213            58              3
                      4j             Br                H              NOH                210-212            58              3
                      4k            CH3                H              NOH                233-235            50              3
                       4l            Cl                Cl             NOH                224-226            53              3
                      4m             H                 H             NOCH3               207-209            63              5
                      4n             F                 H             NOCH3               198-200            67              4
                      4o             Cl                H             NOCH3               206-208            70              4
                      4p             Br                H             NOCH3               202-204            66              4
                      4q            CH3                H             NOCH3               235-237            62              5
                      4r             Cl                Cl            NOCH3               219-221            68              5
                      4s             H                 H             NOBn                162-164            67              7
                      4t             F                 H             NOBn                165-166            75              5
                      4u             Cl                H             NOBn                172-175            76              5
                      4v             Br                H             NOBn                169-170            72              5
                      4w            CH3                H             NOBn                185-187            61              7
                      4x             Cl                Cl            NOBn                179-181            70              6
a
    Isolated yields
Results and discussion                                                          Then, the reaction of 3 with compounds (1a-f) and (2 g-r) in
                                                                                DMF in the presence of NaHCO3 at 25 °C afforded correspond-
Chemistry                                                                       ing N-[2-(aryl-3-yl) ethyl] piperazinyl quinolones (4a-x) which
                                                                                was purified by recrystallization from methanol-chloroform.
The synthetic pathways for the synthesis of intermediates
(2 g-r), the target compounds (4a-x) and their physical data                    Antibacterial activity
are shown in Table 1. Compounds (2 g-r) were prepared by
stirring the ketone analogues with excess amounts of hydroxyl-                  The activity of synthesized compounds (4a-x) were eval-
amine, O-methylhydroxylamine and O-benzylhydroxylamine                          uated against Gram-positive [Staphylococcus aureus ATCC
hydrochloride salts in methanol at room temperature [20–22].                    6538p, Micrococcus luteus, ATCC 1110, Staphylococcus
                                                                                                                           DARU J Pharm Sci
Table 2 In vitro antibacterial activities of compounds 4a-x in Comparison to sarafloxacin (MICs in μg/mL)
epidermidis ATCC 12228 and Bacillus subtilis ATCC 6633] and                results, among ketones, O-methyloximes and O-
Gram-negative [Escherichia coli ATCC 8739, Klebsiella                      benzyloximes derivatives of target compounds, lower suscep-
pneumoniae ATCC 10031 and Pseudomonas aeruginosa                           tibilities (higher MICs) were observed in O-methyloxime and
ATCC 9027 and Serratia marcescens PTCC 1111] using con-                    O-benzyloxime-incorporated derivatives. Thus, O-
ventional agar-dilution method.                                            methyloxime and O-benzyloxime moiety diminished the ac-
   The MIC (minimum inhibitory concentration) values were                  tivity against both Gram-positive and Gram-negative bacteria.
determined against the eight strains and summarized in                     The most potent compound against Gram-positive (compound
Table 2. As indicated in this table, it was concluded that com-            4 g) belongs to the oxime series.
pound 4 g exhibited comparable results with sarafloxacin
against S. aureus, S. epidermidis and B. subtilis, while other
synthesized compounds showed moderate to poor activity                     Conclusions
against these bacteria. The obtained data suggested that the
good activities were obtained in case of Gram-positive micro-              In conclusion, a series of FQ derivatives are synthesized and
organism, Bacillus subtilis. In accordance with antibacterial              evaluated for their biological activity. Compound 4 g showed
DARU J Pharm Sci
good activity against S. aureus, S. epidermidis and B. subtilis.             14.   Odagiri T, Inagaki H, Nagamochi M, Kitamura T, Komoriya S,
                                                                                   Takahashi A. Design, synthesis, and biological evaluation of novel
It was concluded that the introduction of bulky moieties on
                                                                                   7-[(3aS,7aS)-3a-Aminohexahydropyrano[3,4-c]pyrrol-2(3H)-yl]-
piperazine ring at C-7 position of fluoroquinolones reduced                        8-methoxyquinolines with potent antibacterial activity against re-
the antibacterial activities against both Gram-negative and                        spiratory pathogens. J Med Chem. 2018;61:7234–44.
Gram-positive bacteria. In addition, the antibacterial activity              15.   Koga H, Itoh A, Murayama S, Suzue S, Irikura T. Structure-activity
of target compounds could not be improved by O-methylation                         relationship of anti-bacterial 6,7- and 7,8-disubstituted 1-alkyl-1,4-
                                                                                   dihydro-4-oxoquinolone-3-carboxylic acids. J Med Chem.
or O-benzylation of oxime derivatives.                                             1980;23:1358–63.
                                                                             16.   Cooper CS, Klock PL, Chu DT, Hardy DJ, Swanson RN, Plattner
Acknowledgments The authors declare no conflict of interests. This                 JJ. Preparation and in-vitro and in-vivo evaluation of quinolones
work was supported by a grant from the Iranian National Science                    with selective activity against gram-positive organism. J Med
Foundation (INSF); Grant no. 93023097.                                             Chem. 1992;35:1392–8.
                                                                             17.   Shafiee A, Haddad Zahmatkesh M, Mohammadhosseini N,
                                                                                   Khalafy J, Emami S, Moshafi MH, et al. Synthesis and in-vitro
                                                                                   antibacterial activity of N-piperazinyl quinolone derivatives with
References                                                                         5-chloro-2-thienyl group. Daru J Pharm Sci. 2008;16:189–95.
                                                                             18.   Letafat BS, Emami S, Mohammadhosseini N, Faramarzi MA,
 1.   Hooper DC. Mechanisms of action of antimicrobials: focus on                  Samadi N, Shafiee A, et al. Synthesis and antibacterial activity of
      fluoroquinolones. Clin Infect Dis. 2001;32(Supplement_1):9–15.               new N-[2-(thiophen-3-yl)ethyl]piperazinyl quinolones. Chem
 2.    Redgrave LS, Sutton SB, Webber MA, Piddock LJV.                             Pharm Bull. 2007;55:894–8.
       Fluoroquinolone resistance: mechanisms, impact on bacteria and        19.   Foroumadi A, Mohammadhosseini N, Emami S, Letafat B,
       role in evolutionary success. Trends Microbiol. 2014;22:438–45.             Faramarzi MA, Samadi N, et al. Synthesis and antibacterial activity
 3.   Bisacchi GS. Origins of the quinolone class of antibacterials: an            of new 7-piperazinyl-quinolones containing a functionalized 2-(fu-
      expanded "discovery story". J Med Chem. 2015;58:4874–82.                     ran-3-yl)ethyl. Arch Pharm Chem. Life Sci. 2007;340:47–52.
 4.   Hernandez A, Sanchez MB, Martinez JL. Quinolone resistance:
                                                                             20.   Foroumadi A, Emami S, Mansouri S, Javidnia A, Saeid-Adeli N,
      much more than predicted. Front Microbiol. 2011;2:22–7.
                                                                                   Shirazi FH, et al. Synthesis and antibacterial activity of levofloxacin
 5.   Hooper DC. New uses for new and old quinolones and the chal-
                                                                                   derivatives with certain bulky residues on piperazine rings. Eur J
      lenge of resistance. Clin Infect Dis. 2000;30:243–54.
                                                                                   Med Chem. 2007;42:985–92.
 6.   Mascellino MT, Farinelli S, Iegri F, Iona E, De CS. Antimicrobial
      activity of fluoroquinolones and other antibiotics on 1,116 clinical   21.   Emami S, Foroumadi A, Faramarzi MA, Samadi N. Synthesis and
      gram-positive and gram-negative isolates. Drugs Exp Clin Res.                antibacterial activity of quinolone-based compounds containing a
      1998;24:139–51.                                                              coumarin moiety. Arch Pharm Chem Life Sci. 2008;341:42–8.
 7.   Petri WA, Hardman JG, Limbird LE, Gilman AG, editors.                  22.   Shafiee A, Emami S, Ghodsi S, Najjari S, Sorkhi M, Samadi N,
      Goodman and Gilman’s the pharmacological basis of therapeutics.              et al. Synthesis and antibacterial activity of N-[2-(2-naphthyl)ethyl]
      10th ed. New York: McGraw-Hill; 2001. p. 1179–83.                            piperazinyl quinolones. J Iran Chem Soc. 2009;6:325–33.
 8.   Albrecht R. Development of antibacterial agents of the nalidixic       23.   Jazayeri S, Moshafi MH, Firoozpour L, Emami S, Rajabalian S,
      acid type. Prog Drug Res. 1977;21:9–104.                                     Haddad M, et al. Synthesis and antibacterial activity of nitroaryl
 9.   Higgins PG, Fluit AC, Schmitz FJ. Fluoroquinolones: structure and            thiadiazole-gatifloxacin hybrids. Eur J Med Chem. 2009;44:
      target sites. Curr Drug Targets. 2003;4:181–90.                              1205–9.
10.   Correia S, Poeta P, Hebraud M, Capelo JL, Igrejas G. Mechanism of      24.   Foroumadi A, Emami S, Mehni M, Moshafi MH, Shafiee A.
      quinolone action and resistance: where do we stand. J Med                    Synthesis and antibacterial activity of N-[2-(5-bromothiophen-2-
      Microbiol. 2017;66:551–9.                                                    yl)-2-oxoethyl] and N-[(2-5-bromothiophen-2-yl)-2-oximinoethyl]
11.   Aldred KJ, Kerns RJ, Osheroff N. Mechanism of quinolone action               derivatives of piperazinyl quinolones. Bioorg Med Chem Lett.
      and resistance. Biochemistry. 2014;53:1565–74.                               2005;15:4536–9.
12.   Hooper DC, Jacoby GA. Topoisomerase inhibitors: fluoroquino-           25.   Foroumadi A, Oboudiat M, Emami S, Karimollah A, Saghaee L,
      lone mechanisms of action and resistance. Cold Spring Harb                   Moshafi MH, et al. Synthesis and antibacterial activity of N-[2-[5-
      Perspect Med. 2016;6:a025320.                                                (methylthio) thiophen-2-yl]-2-oxoethyl] and N-[2-[5-(methylthio)
13.   Shen LL, Mitscher LA, Sharma PN O’ Donnell TJ, Chu DWT,                      thiophen-2-yl]-2-(oxyimino) ethyl] piperazinylquinolone deriva-
      Copper CS, Rosen T. Mechanism of inhibition of DNA gyrase by                 tives. Bioorg Med Chem. 2006;14:3421–7.
      quinolone antibacterials: a cooperative drug-DNA binding model.        26.   Baron EJ, Finegold SM. Bailey Scott’s diagnostic microbiology.
      Biochemistry 1989;28:3886–3894.                                              11th ed. St. Louis: CV Mosby Company; 2002. p. 235–6.