Cloning Vectors
The molecular analysis of DNA has been made possible by the cloning of DNA. The two
molecules that are required for cloning are the DNA to be cloned and a cloning vector.
Cloning vector - a DNA molecule that carries foreign DNA into a host cell, replicates inside a
bacterial (or yeast) cell and produces many copies of itself and the foreign DNA.
Three features of all cloning vectors
   1. Sequences that permit the propagation of itself in bacteria (or in yeast for YACs)
   2. A cloning site to insert foreign DNA; the most versatile vectors contain a site that can be
      cut by many restriction enzymes.
   3. A method of selecting for bacteria (or yeast for YACs) containing a vector with foreign
      DNA; uually accomplished by selectable markers for drug resistance.
Types of Cloning Vectors
      Plasmid - an extrachromosomal circular DNA molecule that autonomously replicates
       inside the bacterial cell; cloning limit: 100 to 10,000 base pairs or 0.1-10 kilobases (kb)
      Phage - derivatives of bacteriophage lambda; linear DNA molecules, whose region can
       be replaced with foreign DNA without disrupting its life cycle; cloning limit: 8-20 kb
      Cosmids - an extrachromosomal circular DNA molecule that combines features of
       plasmids and phage; cloning limit - 35-50 kb
      Bacterial Artificial Chromosomes (BAC) - based on bacterial mini-F plasmids. cloning
       limit: 75-300 kb
      Yeast Artificial Chromosomes (YAC) - an artificial chromosome that contains telomeres,
       origin of replication, a yeast centromere, and a selectable marker for identification in
       yeast cells; cloning limit: 100-1000 kb
General Steps of Cloning with Any Vector
   1. Preparation of the vector and DNA to be cloned by digestion with restriction enzymes to
      generate complementary ends
   2. Ligation of the foreign DNA into the vector with the enzyme DNA ligase.
   3. Introduction of the DNA into bacterial cells (or yeast cells for YACs) by transformation.
   4. Selection of cells containing foreign DNA by screening for selectable markers (usually
      drug resistance).