DNA Replication
Learning Objectives
 Explain the role of DNA polymerase in copying DNA.
 Compare DNA replication in prokaryotic cells and in
  eukaryotic cells.
Review of DNA Structure
                          nitrogenous
                              bases
 sugar-phosphate
    backbone
                          double helix
Copying DNA
                       replication fork
                                DNA polymerase
  Direction                                 Direction
of replication                            of replication
     new nucleotides
       being added
   DNA polymerase joins nucleotides to synthesize a new, complementary strand of
    DNA.
   the role of DNA polymerase: Besides producing the sugar-phosphate bonds that
    join nucleotides together, DNA polymerase also “proofreads” each new DNA strand
    so that each molecule is a near-perfect copy of the original.
   How is DNA unzipped at the replication forks? Hydrogen bonds are broken.
 What are the two roles of DNA polymerase in replication?
DNA polymerase joins individual nucleotides to produce a new strand of DNA and
  proofreads the new strand.
DNA Replication
 The blue strand represents the
   original    DNA strand.
 The orange strand represents the
   new         DNA strand.
Is a new strand identical to its original
template strand?
No, they are complementary, not identical.
                                  DNA Replication
 •   Since the two strands of DNA are complementary each strand acts as a template for building
     a new strand in replication.
 •   In DNA replication
       The parent molecule unwinds, and two new daughter strands are built based on base-pairing rules
DNA replication is semiconservative
Each of the two new daughter molecules will have one old strand, derived from the
parent molecule, and one newly made strand
                                                                         Okazaki
Leading & Lagging strands
Limits of DNA polymerase III
    can only build onto 3 end of
     an existing DNA strand                                                                5
                                                                                          
                                                  rag ments
                                             ki f
                                        Okaza         5
                                                                    3     5        5    3
                                                 3
                                       5                                       Lagging strand
    3
                                                           ligase
                    growing       3
                 replication fork
    5
                                                                                Leading strand
Lagging strand
                                                                                      
                                                                                     3    5
                                                                                           3
                                               DNA polymerase III
    Okazaki fragments
    joined by ligase                                 Leading strand
          “spot welder” enzyme                               continuous synthesis
                               Summary
Initiation: DNA replication begins at specific locations called origins of
replication. Helicase unwinds the double helix, exposing the individual strands.
Single-strand binding proteins (SSBs) prevent the separated strands from
rejoining. Primase synthesizes short RNA primers that provide a starting point for
DNA polymerase to add complementary DNA nucleotides
Elongation: Two DNA polymerases—one for each strand—extend the nascent
DNA chains. Leading-strand synthesis is continuous, following the template
strand in the 5' to 3' direction. Lagging-strand synthesis occurs discontinuously
due to the antiparallel nature of the DNA strands, resulting in Okazaki fragments.
Each Okazaki fragment is extended in the 5' to 3' direction and requires post-
synthetic processing
Termination: Replication continues until the two replication forks meet and join
the newly synthesized DNA strands. Enzymes such as DNA ligase seal the gaps
between Okazaki fragments, creating full-length DNA strands
Telomeres
• Telomeres: the tips of eukaryotic chromosomes
• The enzyme telomerase adds short, repeated DNA
sequences to telomeres as the chromosomes are replicated.
   Telomeres
The tips, or telomeres, of a DNA molecule are difficult to replicate. Cells use a
special enzyme called telomerase to add short repeated DNA sequences to
telomeres as chromosomes are replicated.
In the micrograph, the red structures are human chromosomes and the telomeres
are stained white, and appear in photograph as yellowish orange.
Prokaryotic DNA Replication
                              new DNA
 replication fork
                                   replication fork
                              unreplicated DNA
 Unlike eukaryotic DNA, the DNA of prokaryotic organisms
  exists as a single loop. Explain that replication in most
  prokaryotic cells begins at a single starting point and
  proceeds in two directions until the entire chromosome is
  copied.
Eukaryotic DNA Replication
                             Unreplicated DNA
    Replication
      forks
                             New DNA
 The process students looked at earlier in the presentation
  was for replication eukaryotic DNA replication. Remind
  students that eukaryotic chromosomes are linear.
 Where is the origin of replication?
in the center of each newly forming strand
 In eukaryotic cells replication may begin at dozens or
  even hundreds of places on the DNA molecule,
  proceeding in both directions until each chromosome is
  completely copied.