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Pull requests: nf-core/funcscan

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Pull requests list

Use prodigial meta mode by default
#131 by jfy133 was merged Sep 29, 2022 Loading…
9 tasks done
Add DeepBGC to workflow diagram
#125 by jfy133 was merged Sep 15, 2022 Loading…
9 tasks
Deepbgc
#122 by louperelo was merged Sep 29, 2022 Loading…
4 tasks
Update workflow diagram to add DeepBGC
#121 by jfy133 was closed Sep 15, 2022 Loading…
Important! Template update for nf-core/tools v2.5.1
#118 by nf-core-bot was merged Sep 15, 2022 Loading…
Important! Template update for nf-core/tools v2.5
#117 by nf-core-bot was closed Sep 1, 2022 Loading…
Add first release funcscan diagram
#115 by jfy133 was merged Aug 18, 2022 Loading…
Update docs: copy button + restructure output docs enhancement Improvement for existing functionality
#114 by jasmezz was merged Aug 12, 2022 Loading…
3 of 10 tasks
Update: Restructure output directory
#113 by jasmezz was merged Aug 11, 2022 Loading…
2 of 10 tasks
Fix output docs file tree
#112 by jasmezz was closed Aug 11, 2022 Loading…
1 of 10 tasks
Fix clash collision
#111 by jfy133 was merged Aug 11, 2022 Loading…
Add a draft of the workflow pipeline documentation Improvements or additions to documentation
#110 by Darcy220606 was merged Aug 12, 2022 Loading…
Update prokka
#109 by jasmezz was merged Aug 10, 2022 Loading…
1 of 10 tasks
Add output folders per sample enhancement Improvement for existing functionality
#107 by jasmezz was merged Aug 10, 2022 Loading…
1 of 10 tasks
Update output folder structure
#106 by jasmezz was merged Aug 8, 2022 Loading…
1 of 10 tasks
add option save_database for amrfinder
#105 by louperelo was merged Jul 29, 2022 Loading…
10 tasks
Add --save_annotations parameter
#104 by jasmezz was merged Jul 29, 2022 Loading…
3 of 10 tasks
Fix name collision errors + unwanted warning
#99 by jasmezz was merged Jul 28, 2022 Loading…
5 of 10 tasks
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Add HMMsearch to BGC workflow
#96 by louperelo was merged Jul 28, 2022 Loading…
5 tasks
Add error + exit when not both antiSMASH directories supplied
#94 by jasmezz was merged Jul 28, 2022 Loading…
4 of 10 tasks
update gecco fix to allow no output if no hits found
#93 by jfy133 was merged Jul 27, 2022 Loading…
10 tasks
Optional save databases
#92 by jfy133 was merged Jul 27, 2022 Loading…
2 of 10 tasks
ProTip! Updated in the last three days: updated:>2025-11-09.