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Commits on Aug 1, 2026
Merge pull request #1083 from nf-core/dev
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Update CHANGELOG.md
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Commits on Jul 30, 2026
chore: bump nextflow to match nf-schema
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Merge remote-tracking branch 'upstream/dev' into dev
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chore: update CPUs
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chore: fix cpus and increase memory for bowtie2_assembly_align
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Commits on Jul 29, 2026
Merge pull request #1095 from dialvarezs/fix/5.5.0-review2-fixes
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Commits on Jul 28, 2026
Merge remote-tracking branch 'upstream/dev' into dev
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Merge pull request #1094 from dialvarezs/fix/convert-depths-single-pass
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chore: revert memory increase
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fix: prevent pypolca dropping assemblies without short reads
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docs: update regarding polishing
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docs: default long-read only qc tool is chopper now
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chore: reorder changelog
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chore: keep the CONVERT_DEPTHS memory bump
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fix: convert depths in a single streaming pass
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chore: update full test resources
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Merge pull request #1091 from dialvarezs/chore/update-resources
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Merge pull request #1090 from dialvarezs/fix/5.5.0-review1-fixes
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chore: update changelog
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Commits on Jul 27, 2026
Merge pull request #1093 from nf-core/fix/nftignore-checkm-storage
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chore: add multiqc to changelog dependencies table
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Merge branch 'dev' into fix/nftignore-checkm-storage
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chore: fix nf-core version
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fix: ignore CheckM storage subdirectories in nf-test snapshots
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Merge branch 'main' into dev
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Merge pull request #1092 from nf-core/patch
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Remove vulnerable PR-comment artifact pattern
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chore: add pypolca version to changelog
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chore: more memory for minimap2
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chore: multiqc and metaspades
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fix: address reviewer comments
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chore: update resources
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Merge pull request #1089 from dialvarezs/fix/retry-exit-174
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Revert "fix: retry on exit status 174"
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