Commits

History for

Commits on Nov 6, 2014

Merge pull request #353 from cc2qe/master
arq5x
committed
b1ccfd3
Merge pull request #350 from udp3f/master
arq5x
committed
c1d1d96

Commits on Nov 5, 2014

Merge branch 'master' of github.com:arq5x/gemini
arq5x
committed
2842806
clinvar causal allele should be text
arq5x
committed
cd42b19
rename dbSNP file to represent timestamp
udp3f
committed
7a03968
update to latest dbSNP(fixes the reported bug); rm unnecessary lines of code
udp3f
committed
ab4aca8
add changes for latest dbSNP file
udp3f
committed
abac79e

Commits on Nov 4, 2014

Commits on Nov 3, 2014

add ExAC annotations
udp3f
committed
31ede2d
add new columns for ExAC data
udp3f
committed
17088b1
add ExAC AF annotations
udp3f
committed
c31bdfc
fixed problem with overreporting single-line variants
cc2qe
committed
446c202

Commits on Nov 2, 2014

Commits on Oct 31, 2014

Provide ability to update third party tools along with gemini itself
chapmanb
committed
1a9278c
bug
arq5x
committed
41ab465

Commits on Oct 30, 2014

first pass at clinvar causal allele
arq5x
committed
853a51b
fix windower defaults
arq5x
committed
6c6c236
refine previous commit
arq5x
committed
93ad2e8

Commits on Oct 29, 2014

don't detect columns with GT in a larger word as genotype columns
arq5x
committed
1cd19ff

Commits on Oct 23, 2014

Merge branch 'master' of github.com:arq5x/gemini
arq5x
committed
a623c77

Commits on Oct 22, 2014

[BUG] \--nonsynonymous option was broken
arq5x
committed
a035e13

Commits on Oct 19, 2014

Merge pull request #340 from cc2qe/sv
arq5x
committed
5c37f84

Commits on Oct 16, 2014

somatic fusion detection
cc2qe
committed
9d4cbc9
[BUG] browser was broken with new genotype wildcard logic.
arq5x
committed
444fa52

Commits on Oct 15, 2014

update variant table to include EAS & SAS allele frequencies from 1000g
udp3f
committed
55411e6
update 1000g data file
udp3f
committed
68eca68
update 1000g to phase 3 data
udp3f
committed
7345c9b

Commits on Oct 4, 2014

fixed IMPRECISE import
cc2qe
committed
069ea39

Commits on Oct 3, 2014

fixed evidence type annotation. also added strandedness to single line SVs for internal use
cc2qe
committed
86b1744