High performance self-hosted photo and video management solution.

Depth-weighted De-Mixing

A collection of Galaxy-related training material

📓 eLabFTW is the most popular open source electronic lab notebook for research labs.

File and Archive Manager

🍃 JavaScript library for mobile-friendly interactive maps 🇺🇦

Fast and Accurate ML in 3 Lines of Code

Formattable Data Structures

NGS perl modules

scikit-learn: machine learning in Python

Official home of genome aligner based upon notion of Cactus graphs

Etherpad: A modern really-real-time collaborative document editor.

Generation of diagrams like flowcharts or sequence diagrams from text in a similar manner as markdown

Short-read and long-read sequencing tools for diagnostics

Customizable workflows based on snakemake and python for the analysis of NGS data

A social networking engine in PHP/MySQL

SPAdes Genome Assembler

Accelerated BLAST compatible local sequence aligner.

Software package for assigning SARS-CoV-2 genome sequences to global lineages.

Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly

uBlock Origin - An efficient blocker for Chromium and Firefox. Fast and lean.

Nextstrain build for mpox virus

🔅 Shapash: User-friendly Explainability and Interpretability to Develop Reliable and Transparent Machine Learning Models

Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)

The modern video player for macOS.

Universal markup converter

real time face swap and one-click video deepfake with only a single image

Highly customizable, ambiguity-aware dotplots for visual sequence analyses

A Nextflow pipeline for evaluating assembly quality

Open Source Alternative to Vercel, Netlify and Heroku.