A sensitive and fast tool for circular RNA detection from RNA-Seq data
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May 4, 2021 - C++
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transcriptomics
Here are 8 public repositories matching this topic...
A tool for de novo clustering of long transcriptomic reads
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Oct 2, 2022 - C++
Transcriptome sequencing assembly
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Jul 28, 2024 - C++
Identifies Multiple Peaks and Qauntifies Transcripts. Quantifies gene expression from TAGseq experiments by identifying transcript isoforms containing distinct 3' UTRs/terminal exons.
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Oct 14, 2025 - C++
RNA Interaction Format (RIF) with reference implementations in C++, JavaScript, and Python
javascript python json bioinformatics schema database cpp json-schema data-storage data-structures specification file-format rna-structure rna json-format interaction transcriptomics database-schema data-format
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Sep 18, 2023 - C++
CircAidMe is a tool designed to analyze data generated with CircAID-p-seq (immaginabiotech.com/product/circaid-p-seq/). CircAidMe was designed and implemented by Genexa (genexa.ch) in collaboration with Immagina Biotechnology.
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Feb 4, 2021 - C++
K-mer indexing and querying in RNA-Seq data
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Jan 23, 2019 - C++
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Nov 12, 2018 - C++
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