Multiple sequence alignment tool that builds on the concept of seed-and-extend algorithms
Codebase for creating the alignments of the Serine Protease family.
🦀 The MASA-CUDAlign extension is used with the MASA architecture to align DNA sequences of unrestricted size with the Smith-Waterman/Needleman-Wunsch algorithm combined with Myers-Miller. It uses the NVIDIA CUDA GPU platform for accelerating the computation time.
FMAlign2: A novel fast multiple nucleotide sequence alignment method for ultra-long datasets
NEFF Calculator and MSA File Converter
Scalable long read self-correction and assembly polishing with multiple sequence alignment
UGENE is free open-source cross-platform bioinformatics software
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