Fitting DNA single-molecule force-extension curves in MATLAB
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Apr 23, 2017 - MATLAB
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single-molecule
Here are 27 public repositories matching this topic...
Data analysis for Ingargiola et al. PLOS ONE (2017) doi:10.1101/085027
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Jun 26, 2017 - Jupyter Notebook
mdtraj_fps ia a command line tool to calculate FRET observables form MD-trajectories
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Mar 14, 2018 - Python
Burst analysis software for smFRET. **Moved to OpenSMFS organization**
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Mar 6, 2019 - Python
A simulator for single molecule FRET experiments of freely diffusing particles.
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Jun 26, 2019 - Python
Implements a modified version of the CUSUM algorithm for robust detection of step-like changes time-series data
c bioinformatics single-molecule nanopore feature-detection dna feature-extraction digital-signal-processing time-series-analysis
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Jul 2, 2020 - C
single molecule tracking
computer-vision single-molecule mathematica biophysics particle-tracking wolfram-language wolfram-mathematica
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Sep 16, 2020 - Mathematica
A useful tool for working with Oxford Nanoimager microscope single-molecule localization data.
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Mar 28, 2021 - Jupyter Notebook
Dwell time analysis of single-molecule force-spectroscopy data
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Sep 25, 2021 - MATLAB
Single Molecule Fluorescence Simulator Toolkit
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Nov 7, 2021 - C++
Detection of Molecules plugin for ImageJ, Utrecht University
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Nov 16, 2022 - Java
Maximum likelihood fits for low photon count data - For active develeopment visit gitlab.peulen.xyz
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Feb 12, 2024 - C++
Single-molecule force spectroscopy calibration
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Feb 22, 2024 - Python
Matlab software for simulation of two-dimensional single particle tracking (SPT) data sets.
single-molecule simulation diffusion single-molecule-imaging single-particle-tracking oligomerization single-molecule-localization
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May 16, 2024 - MATLAB
Single-moecule imaging and computation with RNA
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Jul 13, 2024
Burst analysis software for single and multi-spot single-molecule FRET (smFRET) data.
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Nov 11, 2024 - Jupyter Notebook
Single Molecule Localization Microscopy, Tracking Simulations for Baljyot Parmar at the Weber Lab. Montreal, QC.
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Apr 2, 2025 - Python
A modular single-molecule analysis interface
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Sep 10, 2025 - Python
Lima - Demultiplex Barcoded PacBio Samples
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May 8, 2025 - R
PhD-Level Course for Single-Molecule Sequencing Technologies
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Jun 9, 2025 - Jupyter Notebook
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