Commits

History for

Commits on Jul 23, 2026

add some test sessions
jrobinso
committed
f79e12f

Commits on Jun 30, 2026

* Remove "headed" tests. These have not ran in years, if not decades, and it is not practical to run headed (GUI) tests anyway.
jrobinso
committed
74ae34c

Commits on Jun 26, 2026

Circview (#1843)
jrobinso
authored
e7ffa45

Commits on May 28, 2026

fix unit tests
jrobinso
committed
4203623

Commits on May 9, 2026

add test data and sessions
jrobinso
committed
36eddf5

Commits on May 5, 2026

Implement "minimize tracks" and multi-track menu
jrobinso
authored
6b9bd8e

Commits on Apr 10, 2026

Panels (#1825)
jrobinso
authored
5d32374

Commits on Jan 15, 2026

Borders (#1812)
jrobinso
authored
aa9b368

Commits on Jan 13, 2026

Simplify IGV repaint() cycle significantly. (#1811)
jrobinso
authored
286b6e9

Commits on Jan 9, 2026

Hic track (#1806) -- fixes for whole genome view and other optimizations
jrobinso
authored
8ae555e

Commits on Jan 8, 2026

Juicebox (#1805). Add a popup juicebox-style contact map from an interaction track backed by a hic file
jrobinso
authored
c64f6f7

Commits on Dec 31, 2025

Commits on Dec 29, 2025

Package rename (#1797)
jrobinso
authored
f35e078

Commits on Dec 25, 2025

Sort default (#1795) - Automatically trigger sorting of alignment tracks on locus change and data load. Fixes #1788
jrobinso
authored
f725084

Commits on Dec 5, 2025

Make chr aliasing case insensitive, for an alias "Chr1" will substitute for alias "chr1" even if not explicitly declared.
jrobinso
committed
2e27706

Commits on Dec 4, 2025

Generate HGVS notation for single-nucleotide variants (substitutions)… (#1785)
jrobinso
authored
0a314d6

Commits on Dec 1, 2025

Hgvs (#1781) - support search by HGVS notation
jrobinso
authored
9c50699

Commits on Nov 29, 2025

Batch errors (#1780)
jrobinso
authored
9ba3c6a

Commits on Nov 24, 2025

Batch errors (#1779)
jrobinso
authored
8897601

Commits on Nov 18, 2025

Hic (#1775) - Support for ".hic" files as source for interaction tracks
jrobinso
authored
14a98d7

Commits on Oct 21, 2025

Seg track (#1765)
jrobinso
authored
77fce93

Commits on Sep 24, 2025

Ucsc backup (#1754)
jrobinso
authored
7d9185b

Commits on Sep 8, 2025

Sbx refactor (#1751)
jrobinso
authored
eecf30a

Commits on Aug 21, 2025

Dynseq main (#1738)
jrobinso
authored
382e779

Commits on Aug 15, 2025

Add options for viewing SBX alignments, including simplex tail shading (#1723)
kirschem-roche
authored
62174cf

Commits on Jul 16, 2025

Interact feature refactor (#1720)
jrobinso
authored
be6c529

Commits on Jun 24, 2025

Count non-ACTG read base characters in coverage track (ambiguity code… (#1707)
jrobinso
committed
c3e2e44

Commits on Apr 3, 2025

genome code cleanup
jrobinso
committed
dbd4f82

Commits on Mar 27, 2025

test script updates
jrobinso
committed
8822fea
* Fix problem with loading data URIs -- bed format check fails
jrobinso
committed
5a90327

Commits on Mar 26, 2025

* When in batch mode invoke all runnables on the event thread. By design UI is blocked and execution synchronous.
jrobinso
committed
6260851

Commits on Mar 18, 2025

Fixes for chr aliasing. Other minor bug fixes.
jrobinso
committed
7626538

Commits on Feb 25, 2025

Large track hubs (#1660)
jrobinso
authored
563642c

Commits on Jan 14, 2025

Determine bed file sub-type from track line when specified
jrobinso
committed
95350f6