{"id":"https://openalex.org/W4389518621","doi":"https://doi.org/10.18653/v1/2023.findings-emnlp.863","title":"AniEE: A Dataset of Animal Experimental Literature for Event Extraction","display_name":"AniEE: A Dataset of Animal Experimental Literature for Event Extraction","publication_year":2023,"publication_date":"2023-01-01","ids":{"openalex":"https://openalex.org/W4389518621","doi":"https://doi.org/10.18653/v1/2023.findings-emnlp.863"},"language":"en","primary_location":{"id":"doi:10.18653/v1/2023.findings-emnlp.863","is_oa":true,"landing_page_url":"http://dx.doi.org/10.18653/v1/2023.findings-emnlp.863","pdf_url":"https://aclanthology.org/2023.findings-emnlp.863.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Findings of the Association for Computational Linguistics: EMNLP 2023","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://aclanthology.org/2023.findings-emnlp.863.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100662971","display_name":"Do\u2010Hee Kim","orcid":"https://orcid.org/0000-0002-9636-8293"},"institutions":[{"id":"https://openalex.org/I110273157","display_name":"Kookmin University","ror":"https://ror.org/0049erg63","country_code":"KR","type":"education","lineage":["https://openalex.org/I110273157"]},{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]},{"id":"https://openalex.org/I4210120602","display_name":"Advanced Institute of Convergence Technology","ror":"https://ror.org/01w62yz22","country_code":"KR","type":"facility","lineage":["https://openalex.org/I139264467","https://openalex.org/I4210120602"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Dohee Kim","raw_affiliation_strings":["KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University","institution_ids":["https://openalex.org/I110273157","https://openalex.org/I4210120602","https://openalex.org/I157485424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018566694","display_name":"Ra Yoo","orcid":"https://orcid.org/0000-0003-0457-5496"},"institutions":[{"id":"https://openalex.org/I110273157","display_name":"Kookmin University","ror":"https://ror.org/0049erg63","country_code":"KR","type":"education","lineage":["https://openalex.org/I110273157"]},{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]},{"id":"https://openalex.org/I4210120602","display_name":"Advanced Institute of Convergence Technology","ror":"https://ror.org/01w62yz22","country_code":"KR","type":"facility","lineage":["https://openalex.org/I139264467","https://openalex.org/I4210120602"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Ra Yoo","raw_affiliation_strings":["KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University","institution_ids":["https://openalex.org/I110273157","https://openalex.org/I4210120602","https://openalex.org/I157485424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031205975","display_name":"So\u2010Young Yang","orcid":"https://orcid.org/0000-0002-6850-3486"},"institutions":[{"id":"https://openalex.org/I110273157","display_name":"Kookmin University","ror":"https://ror.org/0049erg63","country_code":"KR","type":"education","lineage":["https://openalex.org/I110273157"]},{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]},{"id":"https://openalex.org/I4210120602","display_name":"Advanced Institute of Convergence Technology","ror":"https://ror.org/01w62yz22","country_code":"KR","type":"facility","lineage":["https://openalex.org/I139264467","https://openalex.org/I4210120602"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Soyoung Yang","raw_affiliation_strings":["KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University","institution_ids":["https://openalex.org/I110273157","https://openalex.org/I4210120602","https://openalex.org/I157485424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079175311","display_name":"Hee Jin Yang","orcid":"https://orcid.org/0000-0002-5406-8081"},"institutions":[{"id":"https://openalex.org/I110273157","display_name":"Kookmin University","ror":"https://ror.org/0049erg63","country_code":"KR","type":"education","lineage":["https://openalex.org/I110273157"]},{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]},{"id":"https://openalex.org/I4210120602","display_name":"Advanced Institute of Convergence Technology","ror":"https://ror.org/01w62yz22","country_code":"KR","type":"facility","lineage":["https://openalex.org/I139264467","https://openalex.org/I4210120602"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hee Yang","raw_affiliation_strings":["KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University","institution_ids":["https://openalex.org/I110273157","https://openalex.org/I4210120602","https://openalex.org/I157485424"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047912015","display_name":"Jaegul Choo","orcid":"https://orcid.org/0000-0003-1071-4835"},"institutions":[{"id":"https://openalex.org/I110273157","display_name":"Kookmin University","ror":"https://ror.org/0049erg63","country_code":"KR","type":"education","lineage":["https://openalex.org/I110273157"]},{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]},{"id":"https://openalex.org/I4210120602","display_name":"Advanced Institute of Convergence Technology","ror":"https://ror.org/01w62yz22","country_code":"KR","type":"facility","lineage":["https://openalex.org/I139264467","https://openalex.org/I4210120602"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Jaegul Choo","raw_affiliation_strings":["KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KAIST AI \u2663 Advanced Institute of Convergence Technology, \u2661 Kookmin University","institution_ids":["https://openalex.org/I110273157","https://openalex.org/I4210120602","https://openalex.org/I157485424"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5047912015"],"corresponding_institution_ids":["https://openalex.org/I110273157","https://openalex.org/I157485424","https://openalex.org/I4210120602"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.16787784,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"12959","last_page":"12971"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8131201267242432},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.7574199438095093},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.6528826951980591},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5731579661369324},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.5652204751968384},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.5345804691314697},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5192034840583801},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5070226192474365},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4417407512664795},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.42206746339797974},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.41166025400161743},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38139912486076355},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07821470499038696}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8131201267242432},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.7574199438095093},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.6528826951980591},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5731579661369324},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.5652204751968384},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.5345804691314697},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5192034840583801},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5070226192474365},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4417407512664795},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.42206746339797974},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.41166025400161743},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38139912486076355},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07821470499038696},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.18653/v1/2023.findings-emnlp.863","is_oa":true,"landing_page_url":"http://dx.doi.org/10.18653/v1/2023.findings-emnlp.863","pdf_url":"https://aclanthology.org/2023.findings-emnlp.863.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Findings of the Association for Computational Linguistics: EMNLP 2023","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.18653/v1/2023.findings-emnlp.863","is_oa":true,"landing_page_url":"http://dx.doi.org/10.18653/v1/2023.findings-emnlp.863","pdf_url":"https://aclanthology.org/2023.findings-emnlp.863.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Findings of the Association for Computational Linguistics: EMNLP 2023","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1286046652","display_name":null,"funder_award_id":"NRF-2022R1A2B5B02001913","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G1769687045","display_name":null,"funder_award_id":"2019-0-00075","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G2148870006","display_name":null,"funder_award_id":"2019-0-00075","funder_id":"https://openalex.org/F4320324161","funder_display_name":"Korea Advanced Institute of Science and Technology"},{"id":"https://openalex.org/G2278400589","display_name":null,"funder_award_id":"NRF-2022R1A2B5B02001913","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G4628738581","display_name":null,"funder_award_id":"No. 2019-0-00075","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"},{"id":"https://openalex.org/G5415505637","display_name":null,"funder_award_id":"2019-0-00075","funder_id":"https://openalex.org/F4320335489","funder_display_name":"Institute for Information and Communications Technology Promotion"},{"id":"https://openalex.org/G6202210419","display_name":null,"funder_award_id":"21162MFDS076","funder_id":"https://openalex.org/F4320322014","funder_display_name":"Ministry of Food and Drug Safety"},{"id":"https://openalex.org/G7064264939","display_name":null,"funder_award_id":"2019-0-00075","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320322014","display_name":"Ministry of Food and Drug Safety","ror":"https://ror.org/01f7dp456"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"},{"id":"https://openalex.org/F4320324161","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63"},{"id":"https://openalex.org/F4320328359","display_name":"Ministry of Science and ICT, South Korea","ror":"https://ror.org/01wpjm123"},{"id":"https://openalex.org/F4320335489","display_name":"Institute for Information and Communications Technology Promotion","ror":"https://ror.org/01g0hqq23"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4389518621.pdf"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W136732505","https://openalex.org/W142474614","https://openalex.org/W154351976","https://openalex.org/W1482328859","https://openalex.org/W1573258796","https://openalex.org/W1830777114","https://openalex.org/W2047782770","https://openalex.org/W2098722636","https://openalex.org/W2107907586","https://openalex.org/W2126898605","https://openalex.org/W2131546905","https://openalex.org/W2163107094","https://openalex.org/W2179494026","https://openalex.org/W2250710764","https://openalex.org/W2296283641","https://openalex.org/W2756381707","https://openalex.org/W2803609931","https://openalex.org/W2908510526","https://openalex.org/W2911489562","https://openalex.org/W2935052563","https://openalex.org/W2950240316","https://openalex.org/W2952594430","https://openalex.org/W2963568202","https://openalex.org/W2971071849","https://openalex.org/W2984582583","https://openalex.org/W3034949140","https://openalex.org/W3035375600","https://openalex.org/W3035625205","https://openalex.org/W3103519070","https://openalex.org/W3104415840","https://openalex.org/W3104692733","https://openalex.org/W3173964750","https://openalex.org/W3175225269","https://openalex.org/W3175562427","https://openalex.org/W3176971429","https://openalex.org/W3216626696","https://openalex.org/W4226470037","https://openalex.org/W4283318325","https://openalex.org/W4297650285"],"related_works":["https://openalex.org/W842810586","https://openalex.org/W4319940250","https://openalex.org/W2352298027","https://openalex.org/W2092919065","https://openalex.org/W3138801416","https://openalex.org/W4236762297","https://openalex.org/W2444550338","https://openalex.org/W2369351710","https://openalex.org/W2594363579","https://openalex.org/W2169232658"],"abstract_inverted_index":{"Event":[0],"extraction":[1,7,63,87],"(EE),":[2],"as":[3],"a":[4,97],"crucial":[5],"information":[6],"(IE)":[8],"task,":[9],"aims":[10],"to":[11,38,48,59],"identify":[12],"event":[13,62,86,104],"triggers":[14],"and":[15,28,52,103,121,124,133],"their":[16],"associated":[17],"arguments":[18],"from":[19,45],"unstructured":[20],"text,":[21],"subsequently":[22],"classifying":[23],"them":[24],"into":[25],"pre-defined":[26],"types":[27],"roles.":[29],"In":[30],"the":[31,49,77,91,129],"biomedical":[32,61,68],"domain,":[33],"EE":[34,69,134],"is":[35,57],"widely":[36],"used":[37],"extract":[39],"complex":[40],"structures":[41],"representing":[42],"biological":[43],"events":[44,123],"literature.":[46],"Due":[47],"complicated":[50],"semantics":[51],"specialized":[53],"domain":[54,109],"knowledge,":[55],"it":[56],"challenging":[58],"construct":[60],"datasets.":[64],"Additionally,":[65],"most":[66],"existing":[67],"datasets":[70],"primarily":[71],"focus":[72],"on":[73,90,128],"cell":[74],"experiments":[75],"or":[76],"overall":[78],"experimental":[79],"procedures.":[80],"Therefore,":[81],"we":[82],"introduce":[83],"AniEE,":[84],"an":[85,114],"dataset":[88,117,127],"concentrated":[89],"animal":[92,99],"experiment":[93,100],"stage.":[94],"We":[95,111],"establish":[96],"novel":[98],"customized":[101],"entity":[102],"scheme":[105],"in":[106],"collaboration":[107],"with":[108],"experts.":[110],"then":[112],"create":[113],"expert-annotated":[115],"high-quality":[116],"containing":[118],"discontinuous":[119],"entities":[120],"nested":[122],"evaluate":[125],"our":[126],"recent":[130],"outstanding":[131],"NER":[132],"models.":[135]},"counts_by_year":[],"updated_date":"2026-05-04T08:30:34.212998","created_date":"2025-10-10T00:00:00"}
