default search action
IEEE/ACM Transactions on Computational Biology and Bioinformatics, Volume 7
Volume 7, Number 1, January 2010
- Ester Díaz, Guillermo Ayala
, Maria Diaz-Fernandez, Liang Gong, Derek Toomre:
Automatic Detection of Large Dense-Core Vesicles in Secretory Cells and Statistical Analysis of Their Intracellular Distribution. 2-11 - Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence
BioExtract Server - An Integrated Workflow-Enabling System to Access and Analyze Heterogeneous, Distributed Biomolecular Data. 12-24 - Shenghuo Zhu, Dingding Wang, Kai Yu, Tao Li, Yihong Gong:
Feature Selection for Gene Expression Using Model-Based Entropy. 25-36 - Petri Pehkonen, Garry Wong, Petri Törönen
Heuristic Bayesian Segmentation for Discovery of Coexpressed Genes within Genomic Regions. 37-49 - Rafal Kustra, Adam Zagdanski
Data-Fusion in Clustering Microarray Data: Balancing Discovery and Interpretability. 50-63 - Oliver Rübel, Gunther H. Weber
Integrating Data Clustering and Visualization for the Analysis of 3D Gene Expression Data. 64-79 - Ju Han, Hang Chang, Kumari L. Andarawewa, Paul Yaswen, Mary Helen Barcellos-Hoff, Bahram Parvin:
Multidimensional Profiling of Cell Surface Proteins and Nuclear Markers. 80-90 - Bogdan Done
Predicting Novel Human Gene Ontology Annotations Using Semantic Analysis. 91-99 - Zhenqiu Liu, Shili Lin, Ming Tan:
Sparse Support Vector Machines with L_{p} Penalty for Biomarker Identification. 100-107 - Yukyee Leung
A Multiple-Filter-Multiple-Wrapper Approach to Gene Selection and Microarray Data Classification. 108-117 - Theodore J. Perkins
A Trade-Off between Sample Complexity and Computational Complexity in Learning Boolean Networks from Time-Series Data. 118-125 - Richard Pelikan, Milos Hauskrecht:
Efficient Peak-Labeling Algorithms for Whole-Sample Mass Spectrometry Proteomics. 126-137 - Pritha Mahata:
Exploratory Consensus of Hierarchical Clusterings for Melanoma and Breast Cancer. 138-152 - Sara C. Madeira
Identification of Regulatory Modules in Time Series Gene Expression Data Using a Linear Time Biclustering Algorithm. 153-165 - Elchanan Mossel
Incomplete Lineage Sorting: Consistent Phylogeny Estimation from Multiple Loci. 166-171 - Alex Alves Freitas
On the Importance of Comprehensible Classification Models for Protein Function Prediction. 172-182 - Noga Alon, Benny Chor, Fabio Pardi, Anat Rapoport:
Approximate Maximum Parsimony and Ancestral Maximum Likelihood. 183-187
Volume 7, Number 2, April 2010
- Marie-France Sagot:
EIC Editorial. 193-194 - Stefano Lonardi
Data Mining in Bioinformatics: Selected Papers from BIOKDD. 195-196 - Aaron M. Smalter, Jun Huan, Yi Jia, Gerald H. Lushington
GPD: A Graph Pattern Diffusion Kernel for Accurate Graph Classification with Applications in Cheminformatics. 197-207 - Petko Bogdanov, Ambuj K. Singh:
Molecular Function Prediction Using Neighborhood Features. 208-217 - Luay Nakhleh:
A Metric on the Space of Reduced Phylogenetic Networks. 218-222 - Gunjan Gupta, Alexander Liu, Joydeep Ghosh:
Automated Hierarchical Density Shaving: A Robust Automated Clustering and Visualization Framework for Large Biological Data Sets. 223-237 - Douglas W. Raiford, Dan E. Krane, Travis E. Doom, Michael L. Raymer:
Automated Isolation of Translational Efficiency Bias That Resists the Confounding Effect of GC(AT)-Content. 238-250 - Arthur Tenenhaus, Vincent Guillemot, Xavier Gidrol
Gene Association Networks from Microarray Data Using a Regularized Estimation of Partial Correlation Based on PLS Regression. 251-262 - Zexuan Zhu, Yew-Soon Ong
Identification of Full and Partial Class Relevant Genes. 263-277 - Ranjit Randhawa
Model Composition for Macromolecular Regulatory Networks. 278-287 - Shahid H. Bokhari, Daniel Janies:
Reassortment Networks for Investigating the Evolution of Segmented Viruses. 288-298 - Tracy L. Bergemann
Signal Quality Measurements for cDNA Microarray Data. 299-308 - Guillaume Blin
Alignments of RNA Structures. 309-322 - Minghui Jiang:
Approximation Algorithms for Predicting RNA Secondary Structures with Arbitrary Pseudoknots. 323-332 - Tetsuo Shibuya:
Fast Hinge Detection Algorithms for Flexible Protein Structures. 333-341 - Sylvain Guillemot, Vincent Berry:
Fixed-Parameter Tractability of the Maximum Agreement Supertree Problem. 342-353 - Xiaowen Liu
Modeling Protein Interacting Groups by Quasi-Bicliques: Complexity, Algorithm, and Application. 354-364 - Xingqin Qi
Sorting Genomes by Reciprocal Translocations, Insertions, and Deletions. 365-374 - Giora Unger, Benny Chor:
Linear Separability of Gene Expression Data Sets. 375-381
Volume 7, Number 3, July 2010
- Florian Leitner
An Overview of BioCreative II.5. 385-399 - Artemy Kolchinsky
Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features. 400-411 - Hong-Jie Dai, Po-Ting Lai
Multistage Gene Normalization and SVM-Based Ranking for Protein Interactor Extraction in Full-Text Articles. 412-420 - Man Lan, Jian Su
Empirical Investigations into Full-Text Protein Interaction Article Categorization Task (ACT) in the BioCreative II.5 Challenge. 421-427 - Yifei Chen, Feng Liu, Bernard Manderick:
BioLMiner System: Interaction Normalization Task and Interaction Pair Task in the BioCreative II.5 Challenge. 428-441 - Rune Sætre, Kazuhiro Yoshida, Makoto Miwa, Takuya Matsuzaki, Yoshinobu Kano, Jun'ichi Tsujii:
Extracting Protein Interactions from Text with the Unified AkaneRE Event Extraction System. 442-453 - Yonggang Cao, Zuofeng Li, Feifan Liu, Shashank Agarwal, Qing Zhang, Hong Yu:
An IR-Aided Machine Learning Framework for the BioCreative II.5 Challenge. 454-461 - Karin Verspoor
Exploring Species-Based Strategies for Gene Normalization. 462-471 - Fabio Rinaldi
OntoGene in BioCreative II.5. 472-480 - Jörg Hakenberg
Efficient Extraction of Protein-Protein Interactions from Full-Text Articles. 481-494 - Rezaul Alam Chowdhury, Hai-Son Le, Vijaya Ramachandran:
Cache-Oblivious Dynamic Programming for Bioinformatics. 495-510 - Leonardo Tininini, Paola Bertolazzi, Alessandra Godi, Giuseppe Lancia
CollHaps: A Heuristic Approach to Haplotype Inference by Parsimony. 511-523 - Ronald Jackups Jr., Jie Liang:
Combinatorial Analysis for Sequence and Spatial Motif Discovery in Short Sequence Fragments. 524-536 - Xiaoxu Han:
Nonnegative Principal Component Analysis for Cancer Molecular Pattern Discovery. 537-549 - Jia Zeng, Xiaoyu Zhao, Xiao-Qin Cao, Hong Yan:
SCS: Signal, Context, and Structure Features for Genome-Wide Human Promoter Recognition. 550-562 - Arthur Zimek
A Study of Hierarchical and Flat Classification of Proteins. 563-571 - Maria Luisa Bonet
On the Complexity of uSPR Distance. 572-576
Volume 7, Number 4, October 2010
- Ion I. Mandoiu
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. 577-578 - Adriana Muñoz, David Sankoff:
Rearrangement Phylogeny of Genomes in Contig Form. 579-587 - Balaji Venkatachalam, Jim Apple
Untangling Tanglegrams: Comparing Trees by Their Drawings. 588-597 - Paola Bonizzoni
Pure Parsimony Xor Haplotyping. 598-610 - Yufeng Wu:
Exact Computation of Coalescent Likelihood for Panmictic and Subdivided Populations under the Infinite Sites Model. 611-618 - Sanguthevar Rajasekaran, Sahar Al Seesi
Improved Algorithms for Parsing ESLTAGs: A Grammatical Model Suitable for RNA Pseudoknots. 619-627 - Guillaume Blin
Querying Graphs in Protein-Protein Interactions Networks Using Feedback Vertex Set. 628-635 - Qiang Cheng:
A Sparse Learning Machine for High-Dimensional Data with Application to Microarray Gene Analysis. 636-646 - William B. Langdon, Graham J. G. Upton, Renata da Silva Camargo, Andrew P. Harrison:
A Survey of Spatial Defects in Homo Sapiens Affymetrix GeneChips. 647-653 - Gang Li, Tak-Ming Chan, Kwong-Sak Leung, Kin-Hong Lee:
A Cluster Refinement Algorithm for Motif Discovery. 654-668 - Jianjun Zhou, Jörg Sander
Finding the Nearest Neighbors in Biological Databases Using Less Distance Computations. 669-680 - Liang-Tsung Huang, Lien Fu Lai, M. Michael Gromiha:
Human-Readable Rule Generator for Integrating Amino Acid Sequence Information and Stability of Mutant Proteins. 681-687 - Christophe Godin
Quantifying the Degree of Self-Nestedness of Trees: Application to the Structural Analysis of Plants. 688-703 - Sagi Snir, Satish Rao:
Quartets MaxCut: A Divide and Conquer Quartets Algorithm. 704-718 - Xin Lu, Anthony Gamst, Ronghui Xu:
RDCurve: A Nonparametric Method to Evaluate the Stability of Ranking Procedures. 719-726 - Herbert H. Tsang
SARNA-Predict: Accuracy Improvement of RNA Secondary Structure Prediction Using Permutation-Based Simulated Annealing. 727-740 - Liwen You, Vladimir Brusic
Using Gaussian Process with Test Rejection to Detect T-Cell Epitopes in Pathogen Genomes. 741-751 - Alberto Apostolico, Matteo Comin
VARUN: Discovering Extensible Motifs under Saturation Constraints. 752-762 - István Miklós, Bence Mélykúti
The Metropolized Partial Importance Sampling MCMC Mixes Slowly on Minimum Reversal Rearrangement Paths. 763-767
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
last updated on 2024-12-26 00:37 CET by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by: