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IEEE/ACM Transactions on Computational Biology and Bioinformatics, Volume 16
Volume 16, Number 1, January - February 2019
- Yoshihiro Yamanishi, Yasubumi Sakakibara, Yi-Ping Phoebe Chen
:
Guest Editorial for the 16th Asia Pacific Bioinformatics Conference. 1-2 - Kouichi Kimura
Parallel Computation of the Burrows-Wheeler Transform of Short Reads Using Prefix Parallelism. 3-13 - Jordan Haack, Eli Zupke, Andrew Ramirez
Computing the Diameter of the Space of Maximum Parsimony Reconciliations in the Duplication-Transfer-Loss Model. 14-22 - Romeo Rizzi
Hardness of Covering Alignment: Phase Transition in Post-Sequence Genomics. 23-30 - Andrzej Mizera
Taming Asynchrony for Attractor Detection in Large Boolean Networks. 31-42 - Tiancong Wang
Adjacent Y-Ion Ratio Distributions and Its Application in Peptide Sequencing. 43-51 - Tom Hartmann
An Exact Algorithm for Sorting by Weighted Preserving Genome Rearrangements. 52-62 - Lei Li, Mukul S. Bansal
An Integrated Reconciliation Framework for Domain, Gene, and Species Level Evolution. 63-76 - Yuhei Nishiyama, Aleksandar Shurbevski
Resource Cut, a New Bounding Procedure to Algorithms for Enumerating Tree-Like Chemical Graphs. 77-90 - Bairong Shen
Modeling and Simulation Studies of Complex Biological Systems for Precision Medicine and Healthcare. 91-92 - Md. Nazmus Sadat
SAFETY: Secure gwAs in Federated Environment through a hYbrid Solution. 93-102 - Chengsheng Mao
Are My EHRs Private Enough? Event-Level Privacy Protection. 103-112 - Yichen Jiang
SecureLR: Secure Logistic Regression Model via a Hybrid Cryptographic Protocol. 113-123 - Mengmeng Sun
An Efficient Mixed-Model for Screening Differentially Expressed Genes of Breast Cancer Based on LR-RF. 124-130 - Wenliang Zhu
Arrhythmia Recognition and Classification Using ECG Morphology and Segment Feature Analysis. 131-138 - Zexian Zeng
Natural Language Processing for EHR-Based Computational Phenotyping. 139-153 - Yin-Ying Wang
DrPOCS: Drug Repositioning Based on Projection Onto Convex Sets. 154-162 - Dewu Ding
A Comparative Study of Network Motifs in the Integrated Transcriptional Regulation and Protein Interaction Networks of Shewanella. 163-171 - Juan Wang
A Mixed-Norm Laplacian Regularized Low-Rank Representation Method for Tumor Samples Clustering. 172-182 - Sushmita Paul
An Integrated Approach for Identification of Functionally Similar MicroRNAs in Colorectal Cancer. 183-192 - Alireza Karbalayghareh
Classification of Single-Cell Gene Expression Trajectories from Incomplete and Noisy Data. 193-207 - Kin-On Cheng
Clustering-Based Compression for Population DNA Sequences. 208-221 - Ping Luo
Disease Gene Prediction by Integrating PPI Networks, Clinical RNA-Seq Data and OMIM Data. 222-232 - Cheng Yan, Jianxin Wang
DNRLMF-MDA: Predicting microRNA-Disease Associations Based on Similarities of microRNAs and Diseases. 233-243 - Ronghui Ju
Early Diagnosis of Alzheimer's Disease Based on Resting-State Brain Networks and Deep Learning. 244-257 - Paola Pesantez-Cabrera
Efficient Detection of Communities in Biological Bipartite Networks. 258-271 - Xiangtao Li
Elucidating Genome-Wide Protein-RNA Interactions Using Differential Evolution. 272-282 - Xuan Zhang
Meta-Path Methods for Prioritizing Candidate Disease miRNAs. 283-291 - Bin Liu
Protein Remote Homology Detection and Fold Recognition Based on Sequence-Order Frequency Matrix. 292-300 - Minghan Chen
Quasi-Newton Stochastic Optimization Algorithm for Parameter Estimation of a Stochastic Model of the Budding Yeast Cell Cycle. 301-311 - Cheng Liu, Hau-San Wong
Structured Penalized Logistic Regression for Gene Selection in Gene Expression Data Analysis. 312-321 - Andrés F. López-Lopera, Mauricio A. Álvarez
Switched Latent Force Models for Reverse-Engineering Transcriptional Regulation in Gene Expression Data. 322-335 - Jiao Zhang
ToBio: Global Pathway Similarity Search Based on Topological and Biological Features. 336-349
Volume 16, Number 2, March - April 2019
- Shuigeng Zhou
Editorial. 350-351 - Xiaojun Chen
Subspace Weighting Co-Clustering of Gene Expression Data. 352-364 - Bo Tian
Reinforce: An Ensemble Approach for Inferring PPI Network from AP-MS Data. 365-376 - Bin Xu, Jihong Guan
Essential Protein Detection by Random Walk on Weighted Protein-Protein Interaction Networks. 377-387 - Weiping Sun
An Improved Approach for N-Linked Glycan Structure Identification from HCD MS/MS Spectra. 388-395 - Jingpu Zhang, Zuping Zhang
Integrating Multiple Heterogeneous Networks for Novel LncRNA-Disease Association Inference. 396-406 - Zuping Zhang
KATZLGO: Large-Scale Prediction of LncRNA Functions by Using the KATZ Measure Based on Multiple Networks. 407-416 - Min Li
MGT-SM: A Method for Constructing Cellular Signal Transduction Networks. 417-424 - Shaoliang Peng
A CPU/MIC Collaborated Parallel Framework for GROMACS on Tianhe-2 Supercomputer. 425-433 - Jie Zhang
A Feature Sampling Strategy for Analysis of High Dimensional Genomic Data. 434-441 - Kefei Liu
A Unified Model for Joint Normalization and Differential Gene Expression Detection in RNA-Seq Data. 442-454 - Wei Zhang
An Integrated Framework for Identifying Mutated Driver Pathway and Cancer Progression. 455-464 - Tim Michels
An RJMCMC-Based Method for Tracking and Resolving Collisions of Drosophila Larvae. 465-474 - Lu Zhang
Bayesian Network Construction and Genotype-Phenotype Inference Using GWAS Statistics. 475-489 - Koyel Mandal
Biomarker Identification for Cancer Disease Using Biclustering Approach: An Empirical Study. 490-509 - Jakob L. Andersen
Chemical Transformation Motifs - Modelling Pathways as Integer Hyperflows. 510-523 - Shahin Boluki
Constructing Pathway-Based Priors within a Gaussian Mixture Model for Bayesian Regression and Classification. 524-537 - Huanan Zhang
Detecting Population-Differentiation Copy Number Variants in Human Population Tree by Sparse Group Selection. 538-549 - Claudia Caudai
Estimation of the Spatial Chromatin Structure Based on a Multiresolution Bead-Chain Model. 550-559 - Bilal Nizami
Estrogenic Active Stilbene Derivatives as Anti-Cancer Agents: A DFT and QSAR Study. 560-568 - Biing-Feng Wang
Fast Algorithms for Computing Path-Difference Distances. 569-582 - Mathias Foo
Modelling and Control of Gene Regulatory Networks for Perturbation Mitigation. 583-595 - Son P. Nguyen
New Deep Learning Methods for Protein Loop Modeling. 596-606 - Yun Niu
Protein-Protein Interaction Identification Using a Similarity-Constrained Graph Model. 607-616 - Leena Salmela
Safely Filling Gaps with Partial Solutions Common to All Solutions. 617-626 - Fernando Lopez-Caamal
Stable IL-$1\beta$1β-Activation in an Inflammasome Signalling Model Depends on Positive and Negative Feedbacks and Tight Regulation of Protein Production. 627-637 - Amir Najafi, Sepehr Janghorbani, Seyed Abolfazl Motahari
Statistical Association Mapping of Population-Structured Genetic Data. 638-649 - Xiaohui Lin
The Robust Classification Model Based on Combinatorial Features. 650-657 - Mingfu Shao
Theory and A Heuristic for the Minimum Path Flow Decomposition Problem. 658-670 - Florian Kaiser
Unsupervised Discovery of Geometrically Common Structural Motifs and Long-Range Contacts in Protein 3D Structures. 671-680 - Jiawei Luo
A Novel Cluster-Based Computational Method to Identify miRNA Regulatory Modules. 681-687 - Pengyao Ping
A Novel Method for LncRNA-Disease Association Prediction Based on an lncRNA-Disease Association Network. 688-693 - Ruofan Xia
Phylogenetic Reconstruction for Copy-Number Evolution Problems. 694-699 - Warith Eddine Djeddi
Corrections to "A Novel Computational Approach for Global Alignment for Multiple Biological Networks". 700
Volume 16, Number 3, May - June 2019
- Carlos Martín-Vide, Miguel A. Vega-Rodríguez
Algorithms for Computational Biology: Third Edition. 701-702 - Syed Ali Ahmed, Saad Mneimneh
Gibbs/MCMC Sampling for Multiple RNA Interaction with Sub-Optimal Solutions. 703-712 - Agnieszka Mykowiecka
Credibility of Evolutionary Events in Gene Trees. 713-726 - David Sankoff
Models for Similarity Distributions of Syntenic Homologs and Applications to Phylogenomics. 727-737 - Laura Urbini
Exploring the Robustness of the Parsimonious Reconciliation Method in Host-Symbiont Cophylogeny. 738-748 - De-Shuang Huang
Guest Editorial for Special Section on the 13th International Conference on Intelligent Computing (ICIC). 749-750 - Jyotsna Talreja Wassan
A Comprehensive Study on Predicting Functional Role of Metagenomes Using Machine Learning Methods. 751-763 - Min Li
A Novel Scaffolding Algorithm Based on Contig Error Correction and Path Extension. 764-773 - Xiaolong Zhang
Efficiently Predicting Hot Spots in PPIs by Combining Random Forest and Synthetic Minority Over-Sampling Technique. 774-781 - Lin Yuan
Integration of Multi-Omics Data for Gene Regulatory Network Inference and Application to Breast Cancer. 782-791 - Su-Ping Deng
Identifying Key Genes of Liver Cancer by Networking of Multiple Data Sets. 792-800 - Peng Wu
Classification of a DNA Microarray for Diagnosing Cancer Using a Complex Network Based Method. 801-808 - Zhu-Hong You
An Efficient Ensemble Learning Approach for Predicting Protein-Protein Interactions by Integrating Protein Primary Sequence and Evolutionary Information. 809-817 - Hua Zhong
A Fast Exact Functional Test for Directional Association and Cancer Biology Applications. 818-826 - Sandip Samaddar, Rituparna Sinha
A Model for Distributed Processing and Analyses of NGS Data under Map-Reduce Paradigm. 827-840 - Dongdong Sun, Minghui Wang, Ao Li
A Multimodal Deep Neural Network for Human Breast Cancer Prognosis Prediction by Integrating Multi-Dimensional Data. 841-850 - Michiel Van Dyck
A Robust Simulator for Physiologically Structured Population Models. 851-864 - Maryam Sharifi, Arta A. Jamshidi
An Adaptive Robust Control Strategy in a Cancer Tumor-Immune System Under Uncertainties. 865-873 - Loris Nanni
Bioimage Classification with Handcrafted and Learned Features. 874-885 - Haoyu Cheng
BitMapper2: A GPU-Accelerated All-Mapper Based on the Sparse q-Gram Index. 886-897 - Pei Wang
Controllability Analysis of a Gene Network for Arabidopsis thaliana Reveals Characteristics of Functional Gene Families. 912-924 - Sven Thiele
Designing Optimal Experiments to Discriminate Interaction Graph Models. 925-935 - Yi-Yan Zhang
Differentiating Prostate Cancer from Benign Prostatic Hyperplasia Using PSAD Based on Machine Learning: Single-Center Retrospective Study in China. 936-941 - Dimitrios Kaloudas
EBWS: Essential Bioinformatics Web Services for Sequence Analyses. 942-953 - Bo Xu
Learning to Refine Expansion Terms for Biomedical Information Retrieval Using Semantic Resources. 954-966 - Tiantian He
Measuring Boundedness for Protein Complex Identification in PPI Networks. 967-979 - Aiguo Wang
Microarray Missing Value Imputation: A Regularized Local Learning Method. 980-993 - You Song
ParaCells: A GPU Architecture for Cell-Centered Models in Computational Biology. 994-1006 - Mohammad Nazrul Ishlam Patoary
Parallel Stochastic Discrete Event Simulation of Calcium Dynamics in Neuron. 1007-1019 - Chao Fang
Prediction of Protein Backbone Torsion Angles Using Deep Residual Inception Neural Networks. 1020-1028 - Gregor Urban, Kevin Bache, Duc T. T. Phan
Deep Learning for Drug Discovery and Cancer Research: Automated Analysis of Vascularization Images. 1029-1035 - Kumar Saurabh Singh
Extension of Partial Gene Transcripts by Iterative Mapping of RNA-Seq Raw Reads. 1036-1041 - Jia-Juan Tu
Inferring Gene Network Rewiring by Combining Gene Expression and Gene Mutation Data. 1042-1048
Volume 16, Number 4, July - August 2019
- Aisharjya Sarkar
A New Algorithm for Counting Independent Motifs in Probabilistic Networks. 1049-1062 - Alexey Markin
Computing Manhattan Path-Difference Median Trees: A Practical Local Search Approach. 1063-1076 - Misagh Kordi, Mukul S. Bansal
Exact Algorithms for Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees. 1077-1090 - Priyanka Ghosh, Ananth Kalyanaraman
FastEtch: A Fast Sketch-Based Assembler for Genomes. 1091-1106 - Olivia Choudhury
Highly Accurate and Efficient Data-Driven Methods for Genotype Imputation. 1107-1116 - Tony Pan
Kmerind: A Flexible Parallel Library for K-mer Indexing of Biological Sequences on Distributed Memory Systems. 1117-1131 - Enrico Siragusa
Linear Time Algorithms to Construct Populations Fitting Multiple Constraint Distributions at Genomic Scales. 1132-1142 - Deeptak Verma
Pareto Optimization of Combinatorial Mutagenesis Libraries. 1143-1153 - Muhibur Rasheed
Statistical Framework for Uncertainty Quantification in Computational Molecular Modeling. 1154-1167 - Wenruo Bai
Submodular Generalized Matching for Peptide Identification in Tandem Mass Spectrometry. 1168-1181 - Quan Zou
Advanced Machine Learning Techniques for Bioinformatics. 1182-1183 - Qinhu Zhang
High-Order Convolutional Neural Network Architecture for Predicting DNA-Protein Binding Sites. 1184-1192 - Min Li
Automated ICD-9 Coding via A Deep Learning Approach. 1193-1202 - Bin Liu
ProtDet-CCH: Protein Remote Homology Detection by Combining Long Short-Term Memory and Ranking Methods. 1203-1210 - Bingqiang Liu
Computational Prediction of Sigma-54 Promoters in Bacterial Genomes by Integrating Motif Finding and Machine Learning Strategies. 1211-1218 - Hongyu Liu
Term-Based Personalization for Feature Selection in Clinical Handover Form Auto-Filling. 1219-1230 - Ran Su
Developing a Multi-Dose Computational Model for Drug-Induced Hepatotoxicity Prediction Based on Toxicogenomics Data. 1231-1239 - Liang Yu
Human Pathway-Based Disease Network. 1240-1249 - Mahdi Imani
Control of Gene Regulatory Networks Using Bayesian Inverse Reinforcement Learning. 1250-1261 - Feng-Biao Guo
Guest Editorial for Special Section on the 7th National Conference on Bioinformatics and Systems Biology of China. 1262-1263 - Leyi Wei
Fast Prediction of Protein Methylation Sites Using a Sequence-Based Feature Selection Technique. 1264-1273 - Yan Lin
Identifying Bacterial Essential Genes Based on a Feature-Integrated Method. 1274-1279 - Yan Shi
Coupling Effect of Double Lungs on a VCV Ventilator with Automatic Secretion Clearance Function. 1280-1287 - Ying Li
Identification and Functional Inference for Tumor-Associated Long Non-Coding RNA. 1288-1301 - Jun-Ping Zhang, Yi Liu, Wei Sun, Xiao-Yang Zhao, La Ta, Wei-Sheng Guo:
Characteristics of Myosin V Processivity. 1302-1308 - Peng-Mian Feng
Predicting Antimicrobial Peptides by Using Increment of Diversity with Quadratic Discriminant Analysis Method. 1309-1312 - Guoshi Chai, Min Yu, Lixu Jiang
HMMCAS: A Web Tool for the Identification and Domain Annotations of CAS Proteins. 1313-1315 - Hao Lin
Identifying Sigma70 Promoters with Novel Pseudo Nucleotide Composition. 1316-1321 - Erman Ayday, Muhammad Naveed, Haixu Tang:
GenoPri'17: International Workshop on Genome Privacy and Security. 1322-1323 - Alexander Senf
End-to-End Security for Local and Remote Human Genetic Data Applications at the EGA. 1324-1327 - Jean Louis Raisaro
MedCo: Enabling Secure and Privacy-Preserving Exploration of Distributed Clinical and Genomic Data. 1328-1341 - Dixie B. Baker, Bartha M. Knoppers
Privacy-Preserving Linkage of Genomic and Clinical Data Sets. 1342-1348 - Jake Weidman
On Sharing Intentions, and Personal and Interdependent Privacy Considerations for Genetic Data: A Vignette Study. 1349-1361 - Ion I. Mandoiu
Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. 1362-1363 - Nina Luhmann
The SCJ Small Parsimony Problem for Weighted Gene Adjacencies. 1364-1373 - Alexey Markin
Efficient Local Search for Euclidean Path-Difference Median Trees. 1374-1385 - Min Li
Construction of Refined Protein Interaction Network for Predicting Essential Proteins. 1386-1397 - Roman Sergeev
Genome-Wide Analysis of MDR and XDR Tuberculosis from Belarus: Machine-Learning Approach. 1398-1408
Volume 16, Number 5, September - October 2019
- Amarda Shehu
Guest Editorial for the ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. 1409 - Paola Bonizzoni
Does Relaxing the Infinite Sites Assumption Give Better Tumor Phylogenies? An ILP-Based Comparative Approach. 1410-1423 - Alan M. Cleary, Thiruvarangan Ramaraj, Indika Kahanda
Exploring Frequented Regions in Pan-Genomic Graphs. 1424-1435 - Sunyoung Kwon
End-to-End Representation Learning for Chemical-Chemical Interaction Prediction. 1436-1447 - Laraib Malik
Rich Chromatin Structure Prediction from Hi-C Data. 1448-1458 - Alexey Markin
Cophenetic Median Trees. 1459-1470 - Lu Zhu
Tissue-Specific Subcellular Localization Prediction Using Multi-Label Markov Random Fields. 1471-1482 - Thuc Duy Le
A Fast PC Algorithm for High Dimensional Causal Discovery with Multi-Core PCs. 1483-1495 - Pieter Meysman
Mining the Enriched Subgraphs for Specific Vertices in a Biological Graph. 1496-1507 - Neda Jahanshad
Multi-Site Meta-Analysis of Morphometry. 1508-1514 - Shokoufeh Mirzaei
Purely Structural Protein Scoring Functions Using Support Vector Machine and Ensemble Learning. 1515-1523 - Ritambhara Singh
Transfer String Kernel for Cross-Context DNA-Protein Binding Prediction. 1524-1536 - Tanay Kumar Saha
Discovery of Functional Motifs from the Interface Region of Oligomeric Proteins Using Frequent Subgraph Mining. 1537-1549 - Marco Frasca
Multitask Protein Function Prediction through Task Dissimilarity. 1550-1560 - Jérôme Feret, Heinz Koeppl:
Editorial. 1561 - Russ Harmer
Bio-Curation for Cellular Signalling: The KAMI Project. 1562-1573 - Célia Biane
Causal Reasoning on Boolean Control Networks Based on Abduction: Theory and Application to Cancer Drug Discovery. 1574-1585 - Houssam Abbas
Quantitative Regular Expressions for Arrhythmia Detection. 1586-1597 - Alexander Lück
Hidden Markov Modelling Reveals Neighborhood Dependence of Dnmt3a and 3b Activity. 1598-1609 - Hugues Mandon, Cui Su
Algorithms for the Sequential Reprogramming of Boolean Networks. 1610-1619 - Viacheslav Kapilevich
Chromatin 3D Reconstruction from Chromosomal Contacts Using a Genetic Algorithm. 1620-1626 - Jong Ho Jhee
Comorbidity Scoring with Causal Disease Networks. 1627-1634 - Donghe Li
Comparison of INDEL Calling Tools with Simulation Data and Real Short-Read Data. 1635-1644 - Shimpei Nishida, Shun Sakuraba
Estimating Energy Parameters for RNA Secondary Structure Predictions Using Both Experimental and Computational Data. 1645-1655 - Je-Keun Rhee
Identification of Local Clusters of Mutation Hotspots in Cancer-Related Genes and Their Biological Relevance. 1656-1662 - Shailima Rampogu, Ayoung Baek, Rohit Bavi
Identification of Novel Scaffolds with Dual Role as Antiepileptic and Anti-Breast Cancer. 1663-1674 - Hiroki Sudo
Secure Wavelet Matrix: Alphabet-Friendly Privacy-Preserving String Search for Bioinformatics. 1675-1684 - Man-Sun Kim, Dong San Kim
Stage-Dependent Gene Expression Profiling in Colorectal Cancer. 1685-1692 - SeongRyeol Moon
Systematic Inspection of the Clinical Relevance of TP53 Missense Mutations in Gastric Cancer. 1693-1701 - Fanchang Hao, Melvin Zhang, Hon Wai Leong
A 2-Approximation Scheme for Sorting Signed Permutations by Reversals, Transpositions, Transreversals, and Block-Interchanges. 1702-1711 - Limin Li
Drug Target Prediction by Multi-View Low Rank Embedding. 1712-1721 - Wen-Bin Xie
EmDL: Extracting miRNA-Drug Interactions from Literature. 1722-1728 - Yanbo Wang
Learning a Structural and Functional Representation for Gene Expressions: To Systematically Dissect Complex Cancer Phenotypes. 1729-1742 - Yishu Wang
Network Clustering Analysis Using Mixture Exponential-Family Random Graph Models and Its Application in Genetic Interaction Data. 1743-1752 - Zhenni Zhao
Protein-Protein Interaction Interface Residue Pair Prediction Based on Deep Learning Architecture. 1753-1759 - Xi Yang
Recovering Hidden Diagonal Structures via Non-Negative Matrix Factorization with Multiple Constraints. 1760-1772
Volume 16, Number 6, November - December 2019
- Anup Kumar Halder
3gClust: Human Protein Cluster Analysis. 1773-1784 - Aida Brankovic
A Distributed Feature Selection Algorithm Based on Distance Correlation with an Application to Microarrays. 1802-1815 - Li Zhang
A Multi-Laplacian Prior and Augmented Lagrangian Approach to the Exploratory Analysis of Time-Varying Gene and Transcriptional Regulatory Networks for Gene Microarray Data. 1816-1829 - Toktam Dehghani
Enhancement of Protein β-Sheet Topology Prediction Using Maximum Weight Disjoint Path Cover. 1936-1947 - Ayan Chaudhury
Machine Vision System for 3D Plant Phenotyping. 2009-2022 - Ashis Kumer Biswas
Robust Inductive Matrix Completion Strategy to Explore Associations Between LincRNAs and Human Disease Phenotypes. 2066-2077 - Aurpan Majumder
A Composite Mode Differential Gene Regulatory Architecture based on Temporal Expression Profiles. 1785-1793 - Yujie Feng, Fan Yang
A Deep Learning Approach for Targeted Contrast-Enhanced Ultrasound Based Prostate Cancer Detection. 1794-1801 - Anvita Gupta Malhotra
A Parametric Targetability Evaluation Approach for Vitiligo Proteome Extracted through Integration of Gene Ontologies and Protein Interaction Topologies. 1830-1842 - Juho Timonen
A Probabilistic Framework for Molecular Network Structure Inference by Means of Mechanistic Modeling. 1843-1854 - Xiaoke Ma
An Integrative Framework for Protein Interaction Network and Methylation Data to Discover Epigenetic Modules. 1855-1866 - Claudia Caudai
ChromStruct 4: A Python Code to Estimate the Chromatin Structure from Hi-C Data. 1867-1878 - Huiwei Zhou
Combining Context and Knowledge Representations for Chemical-Disease Relation Extraction. 1879-1889 - Huimin Luo, Jianxin Wang, Min Li, Junwei Luo, Peng Ni, Kaijie Zhao, Fang-Xiang Wu, Yi Pan:
Computational Drug Repositioning with Random Walk on a Heterogeneous Network. 1890-1900 - Sabrina Stella
Dynamical Detection of Boundaries and Cavities in Biophysical Cell-Based Simulations of Growing Tumor Tissues. 1901-1911 - Xingyu Cai
Efficient Algorithms for Finding the Closest $l$l-Mers in Biological Data. 1912-1921 - Lun Hu
Efficiently Detecting Protein Complexes from Protein Interaction Networks via Alternating Direction Method of Multipliers. 1922-1935 - Xue Jiang
Flexible Non-Negative Matrix Factorization to Unravel Disease-Related Genes. 1948-1957 - Marianna Milano, Pietro Hiram Guzzi
GLAlign: A Novel Algorithm for Local Network Alignment. 1958-1969 - Amit Paul, Jaya Sil:
Identification of Differentially Expressed Genes to Establish New Biomarker for Cancer Prediction. 1970-1985 - Xiaoke Hao
Identifying Candidate Genetic Associations with MRI-Derived AD-Related ROI via Tree-Guided Sparse Learning. 1986-1996 - Anjing Fan, Haitao Wang, Hua Xiang, Xiufen Zou
Inferring Large-Scale Gene Regulatory Networks Using a Randomized Algorithm Based on Singular Value Decomposition. 1997-2008 - Özkan U. Nalbantoglu, Khalid Sayood:
MIMOSA: Algorithms for Microbial Profiling. 2023-2034 - Michail-Antisthenis I. Tsompanas
Modelling Microbial Fuel Cells Using Lattice Boltzmann Methods. 2035-2045 - Runtao Yang, Chengjin Zhang
Predicting FAD Interacting Residues with Feature Selection and Comprehensive Sequence Descriptors. 2046-2056 - V. K. Md. Aksam
Protein Domain Level Cancer Drug Targets in the Network of MAPK Pathways. 2057-2065 - Benjamin Wingfield
Robust Microbial Markers for Non-Invasive Inflammatory Bowel Disease Identification. 2078-2088 - Rahul Kumar Sevakula
Transfer Learning for Molecular Cancer Classification Using Deep Neural Networks. 2089-2100
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