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Theoretical Computer Science, Volume 483

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Volume 483, April 2013

Editorial

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Raffaele Giancarlo, Giovanni Manzini:
Foreword. 1

Special Issue Articles

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Dany Breslauer, Roberto Grossi, Filippo Mignosi:
Simple real-time constant-space string matching. 2-9
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  - journals/tcs/DondiFV13
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Riccardo Dondi, Guillaume Fertin, Stéphane Vialette:
Finding approximate and constrained motifs in graphs. 10-21
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  - journals/tcs/Thachuk13
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Chris Thachuk:
Compressed indexes for text with wildcards. 22-35
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Travis Gagie, Juha Kärkkäinen, Gonzalo Navarro, Simon J. Puglisi:
Colored range queries and document retrieval. 36-50
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Stefanie Schirmer, Robert Giegerich:
Forest alignment with affine gaps and anchors, applied in RNA structure comparison. 51-67
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  - journals/tcs/CliffordJPS13
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Raphaël Clifford, Markus Jalsenius, Ely Porat, Benjamin Sach:
Space lower bounds for online pattern matching. 68-74
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Paolo Ferragina:
On the weak prefix-search problem. 75-84
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  - journals/tcs/CantoneCF13
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Domenico Cantone, Salvatore Cristofaro, Simone Faro:
Efficient string-matching allowing for non-overlapping inversions. 85-95
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  - journals/tcs/ElberfeldSDSS13
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Michael Elberfeld, Danny Segev, Colin R. Davidson, Dana Silverbush, Roded Sharan:
Approximation algorithms for orienting mixed graphs. 96-103
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Daniel G. Brown, Jakub Truszkowski:
Fast error-tolerant quartet phylogeny algorithms. 104-114
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Sebastian Kreft, Gonzalo Navarro:
On compressing and indexing repetitive sequences. 115-133
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Markus J. Bauer, Anthony J. Cox, Giovanna Rosone:
Lightweight algorithms for constructing and inverting the BWT of string collections. 134-148
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David E. Daykin, Jacqueline W. Daykin, W. F. Smyth:
A linear partitioning algorithm for Hybrid Lyndons using VV-order. 149-161
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Tomohiro I, Shunsuke Inenaga, Masayuki Takeda:
Palindrome pattern matching. 162-170
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Michalis Christou, Maxime Crochemore, Costas S. Iliopoulos, Marcin Kubica, Solon P. Pissis, Jakub Radoszewski, Wojciech Rytter, Bartosz Szreder, Tomasz Walen:
Efficient seed computation revisited. 171-181

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