Acts of Commanding and Promising in Dynamified Common Sense Term-Sequence-Deontic-Alethic Logic. - Sano, Katsuhiko; Yamada, Tomoyuki (2022)

Term-Sequence-Modal Logics. - Sawasaki, Takahiro; Sano, Katsuhiko; Yamada, Tomoyuki (2019)

Logic, Rationality, and Interaction - 6th International Workshop, LORI 2017, Sapporo, Japan, September 11-14, 2017, Proceedings (Springer, 2017)

Dynamic Logic of Propositional Commitments. - Yamada, Tomoyuki (2012)

UTGB/medaka: genomic resource database for medaka biology. - Ahsan, Budrul; Kobayashi, Daisuke; Yamada, Tomoyuki; Kasahara, Masahiro; Sasaki, Shin; Saito, Taro L.; Nagayasu, Yukinobu; Doi, Koichiro; Nakatani, Yoichiro; Qu, Wei; Jindo, Tomoko; Shimada, Atsuko; et al. (Nucleic Acids Res., 2008)

Logical dynamics of some speech acts that affect obligations and preferences. - Yamada, Tomoyuki (Synth., 2008)

Acts of Promising in Dynamified Deontic Logic. - Yamada, Tomoyuki (2007)

PrimerStation: a highly specific multiplex genomic PCR primer design server for the human genome. - Yamada, Tomoyuki; Soma, Haruhiko; Morishita, Shinichi (Nucleic Acids Res., 2006)

Acts of Commanding and Changing Obligations. - Yamada, Tomoyuki (2006)

Logical Dynamics of Commands and Obligations. - Yamada, Tomoyuki (2006)

Accelerated off-target search algorithm for siRNA. - Yamada, Tomoyuki; Morishita, Shinichi (Bioinform., 2005)

5'SAGE: 5'-end Serial Analysis of Gene Expression database. - Kasai, Yasuhiro; Hashimoto, Shin-ichi; Yamada, Tomoyuki; Sese, Jun; Sugano, Sumio; Matsushima, Kouji; Morishita, Shinichi (Nucleic Acids Res., 2005)

dsCheck: highly sensitive off-target search software for double-stranded RNA-mediated RNA interference. - Naito, Yuki; Yamada, Tomoyuki; Matsumiya, Takahiro; Ui-Tei, Kumiko; Saigo, Kaoru; Morishita, Shinichi (Nucleic Acids Res., 2005)

Computing Highly Specific and Noise-tolerant Oligomers Efficiently. - Yamada, Tomoyuki; Morishita, Shinichi (J. Bioinform. Comput. Biol., 2004)

siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference. - Naito, Yuki; Yamada, Tomoyuki; Ui-Tei, Kumiko; Morishita, Shinichi; Saigo, Kaoru (Nucleic Acids Res., 2004)

Computing Highly Specific and Mismatch Tolerant Oligomers Efficiently. - Yamada, Tomoyuki; Morishita, Shinichi (2003)

The Gene Resource Locator: gene locus maps for transcriptome analysis. - Honkura, Toshihiko; Ogasawara, Jun; Yamada, Tomoyuki; Morishita, Shinichi (Nucleic Acids Res., 2002)

Identification of Person Objects in Four-Scenes Comics of Japanese Newspapers. - Yamada, Tomoyuki; Watanabe, Toyohide (1999)