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Nuwan Goonasekera

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2020 – today

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2024
[j7]
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Nuwan Goonasekera, Alexandru Mahmoud, Keith Suderman, Enis Afgan:
Galaxy Helm chart: a standardized method for deploying production Galaxy servers. Bioinform. 40(8) (2024)
2023
[i2]
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Nuwan Goonasekera, Catherine J. Bromhead, Simon L. Gladman, Nate Coraor, Björn A. Grüning, Enis Afgan:
Right-sizing compute resource allocations for bioinformatics tools with Total Perspective Vortex. CoRR abs/2312.02060 (2023)
2022
[j6]
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Enis Afgan, Anton Nekrutenko, Björn A. Grüning, Daniel J. Blankenberg, Jeremy Goecks, Michael C. Schatz, Alexander E. Ostrovsky, Alexandru Mahmoud, Andrew J. Lonie, Anna Syme, Anne Fouilloux, Anthony Bretaudeau, Anup Kumar, Arthur C. Eschenlauer, Assunta D. Desanto, Aysam Guerler, Beatriz Serrano-Solano, Bérénice Batut, Bradley W. Langhorst, Bridget Carr, Bryan A. Raubenolt, Cameron J. Hyde, Catherine J. Bromhead, Christopher B. Barnett, Coline Royaux, Cristóbal Gallardo, Daniel J. Fornika, Dannon Baker, Dave Bouvier, Dave Clements, David A. de Lima Morais, David Lopez Tabernero, Delphine Larivière, Engy Nasr, Federico Zambelli, Florian Heyl, Fotis E. Psomopoulos, Frederik Coppens, Gareth R. Price, Gianmauro Cuccuru, Gildas Le Corguillé, Gregory Von Kuster, Gulsum Gudukbay, Helena Rasche, Hans-Rudolf Hotz, Ignacio Eguinoa, Igor V. Makunin, Isuru Ranawaka, James Taylor, Jayadev Joshi, Jennifer Hillman-Jackson, John Chilton, Kaivan Kamali, Keith Suderman, Krzysztof Poterlowicz, Yvan Le Bras, Lucille Lopez-Delisle, Luke Sargent, Madeline E. Bassetti, Marco Antonio Tangaro, Marius van den Beek, Martin Cech, Matthias Bernt, Matthias Fahrner, Mehmet Tekman, Melanie Christine Föll, Michael R. Crusoe, Miguel Roncoroni, Natalie Kucher, Nate Coraor, Nicholas Stoler, Nick Rhodes, Nicola Soranzo, Niko Pinter, Nuwan Goonasekera, Pablo A. Moreno, Pavankumar Videm, Petera Melanie, Pietro Mandreoli, Pratik D. Jagtap, Qiang Gu, Ralf J. M. Weber, Ross Lazarus, Ruben H. P. Vorderman, Saskia D. Hiltemann, Sergey Golitsynskiy, Shilpa Garg, Simon A. Bray, Simon L. Gladman, Simone Leo, Subina P. Mehta, Timothy J. Griffin, Vahid Jalili, Yves Vandenbrouck, Victor Wen, Vijay K. Nagampalli, Wendi A. Bacon, Willem L. De Koning, Wolfgang Maier, Peter J. Briggs:
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update. Nucleic Acids Res. 50(W1): 345-351 (2022)
[c5]
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Isuru Ranawaka, Nuwan Goonasekera, Enis Afgan, Jim Basney, Suresh Marru, Marlon E. Pierce:
Custos Secrets: a Service for Managing User-Provided Resource Credential Secrets for Science Gateways. PEARC 2022: 40:1-40:4
2021
[j5]
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Nuwan Goonasekera, Alexandru Mahmoud, John Chilton, Enis Afgan:
GalaxyCloudRunner: enhancing scalable computing for Galaxy. Bioinform. 37(12): 1763-1765 (2021)

2010 – 2019

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2019
[j4]
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Enis Afgan, Andrew Lonie, James Taylor, Nuwan Goonasekera:
CloudLaunch: Discover and deploy cloud applications. Future Gener. Comput. Syst. 94: 802-810 (2019)
2018
[c4]
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  - conf/IEEEcloud/AfganJG0G18
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Enis Afgan, Vahid Jalili, Nuwan Goonasekera, James Taylor, Jeremy Goecks:
Federated Galaxy: Biomedical Computing at the Frontier. IEEE CLOUD 2018: 871-874
[i1]
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  - journals/corr/abs-1805-04005
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Enis Afgan, Andrew Lonie, James Taylor, Nuwan Goonasekera:
CloudLaunch: Discover and Deploy Cloud Applications. CoRR abs/1805.04005 (2018)
2016
[c3]
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  - conf/mipro/AfganLTSG16
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Enis Afgan, Andrew Lonie, James Taylor, Karolj Skala, Nuwan Goonasekera:
Architectural models for deploying and running virtual laboratories in the cloud. MIPRO 2016: 282-286
[c2]
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Nuwan Goonasekera, Andrew Lonie, James Taylor, Enis Afgan:
CloudBridge: a Simple Cross-Cloud Python Library. XSEDE 2016: 37:1-37:8
2015
[j3]
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  - journals/spe/GoonasekeraCF15
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Nuwan Goonasekera, William J. Caelli, Colin J. Fidge:
LibVM: an architecture for shared library sandboxing. Softw. Pract. Exp. 45(12): 1597-1617 (2015)
[c1]
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Enis Afgan, Konstantinos Krampis, Nuwan Goonasekera, Karolj Skala, James Taylor:
Building and provisioning bioinformatics environments on public and private Clouds. MIPRO 2015: 223-228
2013
[j2]
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  - journals/bioinformatics/SloggettGA13
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Clare Sloggett, Nuwan Goonasekera, Enis Afgan:
BioBlend: automating pipeline analyses within Galaxy and CloudMan. Bioinform. 29(13): 1685-1686 (2013)
2012
[j1]
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Nuwan Goonasekera, William J. Caelli, Colin J. Fidge:
A Hardware Virtualization Based Component Sandboxing Architecture. J. Softw. 7(9): 2107-2118 (2012)

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