Deep Neural Cellular Potts Models. - Minartz, Koen; D'Hondt, Tim; Hillmann, Leon; Starruß, Jörn; Brusch, Lutz; Menkovski, Vlado (CoRR, 2025)

FitMultiCell: simulating and parameterizing computational models of multi-scale and multi-cellular processes. - Alamoudi, Emad; Schälte, Yannik; Müller, Robert; Starruß, Jörn; Bundgaard, Nils; Graw, Frederik; Brusch, Lutz; Hasenauer, Jan (Bioinform., 2023)

Collective cell migration due to guidance-by-followers is robust to multiple stimuli. - Müller, Robert; Boutillon, Arthur; Jahn, Diego; Starruß, Jörn; Brooks, David; Brusch, Lutz (Frontiers Appl. Math. Stat., 2023)

Influence of cell type specific infectivity and tissue composition on SARS-CoV-2 infection dynamics within human airway epithelium. - Raach, Benjamin; Bundgaard, Nils; Haase, Marika J.; Starruß, Jörn; Sotillo, Rocio; Stanifer, Megan L.; Graw, Frederik (PLoS Comput. Biol., 2023)

BioSimulators: a central registry of simulation engines and services for recommending specific tools. - Shaikh, Bilal; Smith, Lucian P.; Vasilescu, Dan; Marupilla, Gnaneswara; Wilson, Michael; Agmon, Eran; Agnew, Henry; Andrews, Steven S.; Anwar, Azraf; Beber, Moritz E.; Bergmann, Frank T.; Brooks, David; et al. (Nucleic Acids Res., 2022)

BioSimulators: a central registry of simulation engines and services for recommending specific tools. - Shaikh, Bilal; Smith, Lucian P.; Vasilescu, Dan; Marupilla, Gnaneswara; Wilson, Michael; Agmon, Eran; Agnew, Henry; Andrews, Steven S.; Anwar, Azraf; Beber, Moritz E.; Bergmann, Frank T.; Brooks, David; et al. (CoRR, 2022)

A Workflow for the Integral Performance Analysis of Cloud Applications Using Monitoring and Tracing Techniques. - Sastri, Yedhu; Feldhoff, Kim; Starruß, Jörn; Jäkel, René; Müller-Pfefferkorn, Ralph (2017)

Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology. - Starruß, Jörn; Back, Walter de; Brusch, Lutz; Deutsch, Andreas (Bioinform., 2014)

Middle-out Modeling of Multiscale Morphodynamics. - Back, Walter de; Starruß, Jörn (2010)