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Brandon Ginley
2020 – today
- 2023
- [c15]Brandon Ginley, Nicholas J. Lucarelli, Jarcy Zee, Sanjay Jain, Seung Seok Han, Luis Rodrigues, Michelle L. Wong, Kuang-Yu Jen, Pinaki Sarder:
Automated reference kidney histomorphometry using a panoptic segmentation neural network correlates to patient demographics and creatinine. Digital and Computational Pathology 2023 - 2022
- [c14]Samuel P. Border, Brandon Ginley, John E. Tomaszewski, Pinaki Sarder:
HistoLens: a generalizable tool for increasing accessibility and interpretability of quantitative analyses in digital pathology. Digital and Computational Pathology 2022 - [c13]Neil Kavthekar, Brandon Ginley, Samuel P. Border, Nicholas J. Lucarelli, Kuang-Yu Jen, Pinaki Sarder:
Automated tubular morphometric visualization for whole kidney biopsy. Digital and Computational Pathology 2022 - [c12]Nicholas J. Lucarelli, Donghwan Yun, Dohyun Han, Brandon Ginley, Kyung Chul Moon, Avi Rosenberg, John Tomaszewski, Seung Seok Han, Pinaki Sarder:
Computational integration of renal histology and urinary proteomics using neural networks. Digital and Computational Pathology 2022 - 2021
- [c11]Darshana Govind, Briana A. Santo, Brandon Ginley, Rabi Yacoub, Avi Z. Rosenberg, Kuang-Yu Jen, Vighnesh Walavalkar, Gregory E. Wilding, Amber M. Worral, Imtiaz Mohammad, Pinaki Sarder:
Automated detection and quantification of Wilms' Tumor 1-positive cells in murine diabetic kidney disease. Digital Pathology 2021 - [c10]Kuang-Yu Jen, Leema Krishna Murali, Brendon Lutnick, Brandon Ginley, Darshana Govind, Hidetoshi Mori, Guofeng Gao, Pinaki Sarder:
In silico multi-compartment detection based on multiplex immunohistochemical staining in renal pathology. Digital Pathology 2021 - [c9]Avinash Kammardi Shashiprakash, Brendon Lutnick, Brandon Ginley, Darshana Govind, Nicholas J. Lucarelli, Kuang-Yu Jen, Avi Z. Rosenberg, Anatoly Urisman, Vighnesh Walavalkar, Jonathan E. Zuckerman, Marco Delsante, Mei Lin Z. Bissonnette, John Tomaszewski, David Manthey, Pinaki Sarder:
A distributed system improves inter-observer and AI concordance in annotating interstitial fibrosis and tubular atrophy. Digital Pathology 2021 - [i3]Brendon Lutnick, Leema Krishna Murali, Brandon Ginley, Pinaki Sarder:
Histo-fetch - On-the-fly processing of gigapixel whole slide images simplifies and speeds neural network training. CoRR abs/2102.11433 (2021) - 2020
- [c8]Brandon Ginley, Kuang-Yu Jen, Avi Rosenberg, Giovanni Maria Rossi, Sanjay Jain, Pinaki Sarder:
Fully automated classification of glomerular lesions in lupus nephritis. Digital Pathology 2020: 113200Y - [c7]Leema Krishna Murali, Brendon Lutnick, Brandon Ginley, John Tomaszewski, Pinaki Sarder:
Generative modeling for renal microanatomy. Digital Pathology 2020: 113200F - [c6]Brendon Lutnick, Brandon Ginley, Kuang-Yu Jen, Wen Dong, Pinaki Sarder:
Generative modeling for label-free glomerular modeling and classification. Digital Pathology 2020: 1132007 - [i2]Brandon Ginley, Kuang-Yu Jen, Avi Rosenberg, Felicia Yen, Sanjay Jain, Agnes B. Fogo, Pinaki Sarder:
Neural Network Segmentation of Interstitial Fibrosis, Tubular Atrophy, and Glomerulosclerosis in Renal Biopsies. CoRR abs/2002.12868 (2020)
2010 – 2019
- 2019
- [j1]Brendon Lutnick, Brandon Ginley, Darshana Govind, Sean D. McGarry, Peter S. LaViolette, Rabi Yacoub, Sanjay Jain, John Tomaszewski, Kuang-Yu Jen, Pinaki Sarder:
An integrated iterative annotation technique for easing neural network training in medical image analysis. Nat. Mach. Intell. 1(2): 112-119 (2019) - 2018
- [c5]Brandon G. Ginley, John Tomaszewski, Kuang-Yu Jen, Agnes B. Fogo, Sanjay Jain, Pinaki Sarder:
Computational analysis of the structural progression of human glomeruli in diabetic nephropathy. Digital Pathology 2018: 105810A - [c4]Darshana Govind, Brandon Ginley, Brendon Lutnick, John Tomaszewski, Pinaki Sarder:
Glomerular detection and segmentation from multimodal microscopy images using a Butterworth band-pass filter. Digital Pathology 2018: 1058114 - [i1]Brendon Lutnick, Brandon Ginley, Darshana Govind, Sean D. McGarry, Peter S. LaViolette, Rabi Yacoub, Sanjay Jain, John Tomaszewski, Kuang-Yu Jen, Pinaki Sarder:
Iterative annotation to ease neural network training: Specialized machine learning in medical image analysis. CoRR abs/1812.07509 (2018) - 2017
- [c3]Brandon Ginley, Tiffany Emmons, Prabhu Sasankan, Constantin Urban, Brahm H. Segal, Pinaki Sarder:
Identification and characterization of neutrophil extracellular trap shapes in flow cytometry. Digital Pathology 2017: 101400D - [c2]Brandon Ginley, John Tomaszewski, Pinaki Sarder:
Automatic computational labeling of glomerular textural boundaries. Digital Pathology 2017: 101400G - 2016
- [c1]Pinaki Sarder, Brandon Ginley, John Tomaszewski:
Automated renal histopathology: digital extraction and quantification of renal pathology. Digital Pathology 2016: 97910F
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