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Jacob Köhler
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2010 – 2019
- 2014
- [p1]Jan Taubert, Jacob Köhler:
Molecular Information Fusion in Ondex. Approaches in Integrative Bioinformatics 2014: 131-160
2000 – 2009
- 2009
- [c5]Jan Taubert, Matthew Hindle, Artem Lysenko, Jochen Weile, Jacob Köhler, Christopher J. Rawlings:
Linking Life Sciences Data Using Graph-Based Mapping. DILS 2009: 16-30 - 2008
- [j13]Robert Pesch, Artem Lysenko, Matthew Hindle, Keywan Hassani-Pak, Ralf Thiele, Christopher J. Rawlings, Jacob Köhler, Jan Taubert:
Graph-based sequence annotation using a data integration approach. J. Integr. Bioinform. 5(2) (2008) - [j12]Rainer Winnenburg, Martin Urban, Andrew M. Beacham, Thomas K. Baldwin, Sabrina Holland, Magdalen Lindeberg, Hilde Hansen, Christopher J. Rawlings, Kim E. Hammond-Kosack, Jacob Köhler:
PHI-base update: additions to the pathogen-host interaction database. Nucleic Acids Res. 36(Database-Issue): 572-576 (2008) - 2007
- [j11]Jan Taubert, Klaus Peter Sieren, Matthew Hindle, Berend Hoekman, Rainer Winnenburg, Stephan Philippi, Christopher J. Rawlings, Jacob Köhler:
The OXL format for the exchange of integrated datasets. J. Integr. Bioinform. 4(3) (2007) - 2006
- [j10]Jacob Köhler, Jan Baumbach, Jan Taubert, Michael Specht, Andre Skusa, Alexander Rüegg, Christopher J. Rawlings, Paul Verrier, Stephan Philippi:
Graph-based analysis and visualization of experimental results with ONDEX. Bioinform. 22(11): 1383-1390 (2006) - [j9]Jacob Köhler, Katherine Munn, Alexander Rüegg, Andre Skusa, Barry Smith:
Quality control for terms and definitions in ontologies and taxonomies. BMC Bioinform. 7: 212 (2006) - [j8]Jacob Köhler, Stephan Philippi, Michael Specht, Alexander Rüegg:
Ontology based text indexing and querying for the semantic web. Knowl. Based Syst. 19(8): 744-754 (2006) - [j7]Rainer Winnenburg, Thomas K. Baldwin, Martin Urban, Christopher J. Rawlings, Jacob Köhler, Kim E. Hammond-Kosack:
PHI-base: a new database for pathogen host interactions. Nucleic Acids Res. 34(Database-Issue): 459-464 (2006) - [j6]Stephan Philippi, Jacob Köhler:
Automated Structure Extraction and XML Conversion of Life Science Database Flat Files. IEEE Trans. Inf. Technol. Biomed. 10(4): 714-721 (2006) - 2005
- [j5]Andre Skusa, Alexander Rüegg, Jacob Köhler:
Extraction of biological interaction networks from scientific literature. Briefings Bioinform. 6(3): 263-276 (2005) - 2004
- [j4]Jacob Köhler, Christopher J. Rawlings, Paul Verrier, Rowan A. C. Mitchell, Andre Skusa, Alexander Rüegg, Stephan Philippi:
Linking experimental results, biological networks and sequence analysis methods using Ontologies and Generalized Data Structures. Silico Biol. 5(1): 33-44 (2004) - [j3]Stephan Philippi, Jacob Köhler:
Using XML Technology for the Ontology-Based Semantic Integration of Life Science Databases. IEEE Trans. Inf. Technol. Biomed. 8(2): 154-160 (2004) - [c4]Barry Smith, Jacob Köhler, Anand Kumar:
On the Application of Formal Principles to Life Science Data: a Case Study in the Gene Ontology. DILS 2004: 79-94 - 2003
- [b1]Jacob Köhler:
SEMEDA (semantic meta database): ontology based semantic integration of biological databases. Bielefeld University, Germany, 2003, pp. 1-140 - [j2]Jacob Köhler, Stephan Philippi, Matthias Lange:
SEMEDA: ontology based semantic integration of biological databases. Bioinform. 19(18): 2420-2427 (2003) - 2002
- [j1]Jacob Köhler, Steffen Schulze-Kremer:
The Semantic Metadatabase (SEMEDA): Ontology Based Integration of Federated Molecular Biological Data Sources. Silico Biol. 2(3): 219-231 (2002) - [c3]Ming Chen, Andreas Freier, Jacob Köhler, Alexander Rüegg:
The biology Petri net markup language. Promise 2002: 150-161 - 2001
- [c2]Jacob Köhler, Steffen Schulze-Kremer:
The Semantic Metadatabase (SEMEDA): Ontology Based Integration of Federated Molecular Biological Data Sources. German Conference on Bioinformatics 2001: 47-52 - 2000
- [c1]Jacob Köhler, Matthias Lange, Ralf Hofestädt, Steffen Schulze-Kremer:
Logical and Semantic Database Integration. BIBE 2000: 77-80
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