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Yu-Dong Cai 0001
Person information
- affiliation: Shanghai University, School of Life Sciences, China
Other persons with the same name
- Yudong Cai 0002 — Zilliz, Shanghai, China
- Yudong Cai 0003
— Northwest A&F University, Yangling, China
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2020 – today
- 2024
- [j36]Anhui Yin, Lei Chen, Bo Zhou, Yu-Dong Cai:
CMAGN: circRNA-miRNA association prediction based on graph attention auto-encoder and network consistency projection. BMC Bioinform. 25(1): 336 (2024) - [j35]Jingxin Ren, Xianchao Zhou, Ke Huang, Lei Chen, Wei Guo, Kaiyan Feng, Tao Huang
Identification of key genes associated with persistent immune changes and secondary immune activation responses induced by influenza vaccination after COVID-19 recovery by machine learning methods. Comput. Biol. Medicine 169: 107883 (2024) - [j34]Lin Li, Feiming Huang, Yu-Hang Zhang, Yu-Dong Cai:
Identifying allergic-rhinitis-associated genes with random-walk-based method in PPI network. Comput. Biol. Medicine 175: 108495 (2024) - [j33]Jingxin Ren, Qian Gao, Xianchao Zhou, Lei Chen, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Identification of key gene expression associated with quality of life after recovery from COVID-19. Medical Biol. Eng. Comput. 62(4): 1031-1048 (2024) - 2022
- [j32]Xiaoyong Pan
Identifying Protein Subcellular Locations With Embeddings-Based node2loc. IEEE ACM Trans. Comput. Biol. Bioinform. 19(2): 666-675 (2022) - 2020
- [j31]Yu-Hang Zhang
Screening Dys-Methylation Genes and Rules for Cancer Diagnosis by Using the Pan-Cancer Study. IEEE Access 8: 489-501 (2020) - [j30]Wei Guo
Disease Cluster Detection and Functional Characterization. IEEE Access 8: 141958-141966 (2020)
2010 – 2019
- 2019
- [j29]Lei Chen
Identifying Essential Signature Genes and Expression Rules Associated With Distinctive Development Stages of Early Embryonic Cells. IEEE Access 7: 128570-128578 (2019) - 2017
- [j28]Lei Chen
Identify Key Sequence Features to Improve CRISPR sgRNA Efficacy. IEEE Access 5: 26582-26590 (2017) - [j27]Lei Chen
Analysis of cancer-related lncRNAs using gene ontology and KEGG pathways. Artif. Intell. Medicine 76: 27-36 (2017) - [j26]Chenglin Liu, Yu-Hang Zhang
Identification of transcription factors that may reprogram lung adenocarcinoma. Artif. Intell. Medicine 83: 52-57 (2017) - 2016
- [j25]You Zhou, Tao Huang, Guohua Huang, Ning Zhang, Xiangyin Kong, Yu-Dong Cai
Prediction of protein N-formylation and comparison with N-acetylation based on a feature selection method. Neurocomputing 217: 53-62 (2016) - 2015
- [j24]Fei Yuan
Identifying New Candidate Genes and Chemicals Related to Prostate Cancer Using a Hybrid Network and Shortest Path Approach. Comput. Math. Methods Medicine 2015: 462363:1-462363:12 (2015) - [j23]Baoman Wang, Fei Yuan
Identifying Novel Candidate Genes Related to Apoptosis from a Protein-Protein Interaction Network. Comput. Math. Methods Medicine 2015: 715639:1-715639:11 (2015) - 2014
- [j22]Yudong Cai
Novel Computational Methods and Tools in Biomedicine and Biopharmacy. Comput. Math. Methods Medicine 2014: 127515:1-127515:2 (2014) - 2011
- [j21]Tao Huang, Lei Chen
Predicting triplet of transcription factor - mediating enzyme - target gene by functional profiles. Neurocomputing 74(17): 3677-3681 (2011) - 2010
- [j20]Lei Chen
Predicting the network of substrate-enzyme-product triads by combining compound similarity and functional domain composition. BMC Bioinform. 11: 293 (2010) - [j19]Lei Chen
Prediction of interactiveness between small molecules and enzymes by combining gene ontology and compound similarity. J. Comput. Chem. 31(8): 1766-1776 (2010)
2000 – 2009
- 2009
- [j18]Bing Niu, Lin Lu, Liang Liu, Tian Hong Gu, Kai-Yan Feng, Wen-Cong Lu, Yu-Dong Cai
HIV-1 protease cleavage site prediction based on amino acid property. J. Comput. Chem. 30(1): 33-39 (2009) - [j17]Lei Chen
Multiple classifier integration for the prediction of protein structural classes. J. Comput. Chem. 30(14): 2248-2254 (2009) - [c2]Yudong Cai
A committee of NNA classifiers for the prediction of the binding between miRNAs and the target genes using a novel coding method. SMC 2009: 4287-4292 - 2008
- [c1]Yu-Dong Cai
Predicting Protein-Protein Interactions with Pseudo Amino Acid Composition. BMEI (1) 2008: 158-163 - 2007
- [j16]Ziliang Qian, Lingyi Lu, Xiao-Jun Liu, Yu-Dong Cai
An approach to predict transcription factor DNA binding site specificity based upon gene and transcription factor functional categorization. Bioinform. 23(18): 2449-2454 (2007) - [j15]Lingyi Lu, Ziliang Qian, Yu-Dong Cai
ECS: An automatic enzyme classifier based on functional domain composition. Comput. Biol. Chem. 31(3): 226-232 (2007) - 2006
- [j14]Peilin Jia, Tieliu Shi, Yudong Cai
Demonstration of two novel methods for predicting functional siRNA efficiency. BMC Bioinform. 7: 271 (2006) - [j13]Sujun Li, Boshu Liu, Rong Zeng, Yudong Cai
Predicting O-glycosylation sites in mammalian proteins by using SVMs. Comput. Biol. Chem. 30(3): 203-208 (2006) - [j12]Guoqing Zhang
Operon prediction based on SVM. Comput. Biol. Chem. 30(3): 233-240 (2006) - 2005
- [j11]Kuo-Chen Chou, Yu-Dong Cai
Predicting protein localization in budding Yeast. Bioinform. 21(7): 944-950 (2005) - [j10]Kuo-Chen Chou, Yu-Dong Cai
Prediction of Membrane Protein Types by Incorporating Amphipathic Effects. J. Chem. Inf. Model. 45(2): 407-413 (2005) - 2004
- [j9]Yu-Dong Cai
Predicting subcellular localization of proteins in a hybridization space. Bioinform. 20(7): 1151-1156 (2004) - [j8]Yu-Dong Cai
Prediction of Saccharomyces cerevisiae protein functional class from functional domain composition. Bioinform. 20(8): 1292-1300 (2004) - 2003
- [j7]Yu-Dong Cai
Prediction of protein secondary structure content by artificial neural network. J. Comput. Chem. 24(6): 727-731 (2003) - 2002
- [j6]Yu-Dong Cai
Artificial Neural Network Model for Predicting Protein Subcellular Location. Comput. Chem. 26(2): 179-182 (2002) - [j5]Yu-Dong Cai
Prediction of Protein Structural Classes by Support Vector Machines. Comput. Chem. 26(3): 293-296 (2002) - [j4]Yu-Dong Cai
Artificial Neural Network Method for Predicting Protein Secondary Structure Content. Comput. Chem. 26(4): 347-350 (2002) - [j3]Yu-Dong Cai
Support vector machines for predicting HIV protease cleavage sites in protein. J. Comput. Chem. 23(2): 267-274 (2002) - 2001
- [j2]Yu-Dong Cai
Support Vector Machines for predicting protein structural class. BMC Bioinform. 2: 3 (2001)
1990 – 1999
- 1995
- [j1]Yudong Cai
Artificial neural network method for discriminating coding regions of eukaryotic genes. Comput. Appl. Biosci. 11(5): 497-501 (1995)
Coauthor Index
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