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Jessica Cara Mar
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2020 – today
- 2022
- [j11]Ebony Rose Watson
, Ariane Mora, Atefeh Taherian Fard, Jessica Cara Mar
How does the structure of data impact cell-cell similarity? Evaluating how structural properties influence the performance of proximity metrics in single cell RNA-seq data. Briefings Bioinform. 23(6) (2022) - 2020
- [j10]Laurence de Torrenté, Samuel E. Zimmerman, Masako Suzuki, Maximilian Christopeit, John M. Greally, Jessica Cara Mar:
The shape of gene expression distributions matter: how incorporating distribution shape improves the interpretation of cancer transcriptomic data. BMC Bioinform. 21-S(21): 562 (2020)
2010 – 2019
- 2019
- [j9]Daniel G. Piqué, Grasiella A. Andriani, Elaine Maggi, Samuel E. Zimmerman, John M. Greally, Cristina Montagna, Jessica Cara Mar:
Aneuvis: web-based exploration of numerical chromosomal variation in single cells. BMC Bioinform. 20(1): 336:1-336:10 (2019) - [j8]Benjamin V. Church, Henry T. Williams, Jessica Cara Mar:
Investigating skewness to understand gene expression heterogeneity in large patient cohorts. BMC Bioinform. 20-S(24): 668 (2019) - 2018
- [j7]Shuonan Chen
Evaluating methods of inferring gene regulatory networks highlights their lack of performance for single cell gene expression data. BMC Bioinform. 19(1): 232:1-232:21 (2018) - 2014
- [j6]The Fantom Consortium, RIKEN PMII, RIKEN CLST (DGT), Alistair R. R. Forrest, Hideya Kawaji, Michael Rehli, J. Kenneth Baillie, Michiel J. L. de Hoon, Vanja Haberle, Timo Lassmann, Ivan V. Kulakovskiy, Marina Lizio, Masayoshi Itoh, Robin Andersson, Christopher J. Mungall, Terrence F. Meehan, Sebastian Schmeier, Nicolas Bertin, Mette Jørgensen, Emmanuel Dimont, Erik Arner, Christian Schmidl, Ulf Schaefer, Yulia A. Medvedeva
A promoter-level mammalian expression atlas. Nat. 507(7493): 462-470 (2014) - 2012
- [j5]Thomas W. Chittenden, Eleanor Howe, Jennifer M. Taylor, Jessica Cara Mar
nEASE: a method for gene ontology subclassification of high-throughput gene expression data. Bioinform. 28(5): 726-728 (2012) - [j4]Natali Gulbahce, Han Yan, Amélie Dricot, Megha Padi, Danielle Byrdsong, Rachel Franchi, Deok-Sun Lee
Viral Perturbations of Host Networks Reflect Disease Etiology. PLoS Comput. Biol. 8(6) (2012) - 2011
- [j3]Jessica Cara Mar
Defining an informativeness metric for clustering gene expression data. Bioinform. 27(8): 1094-1100 (2011)
2000 – 2009
- 2009
- [j2]Jessica Cara Mar
Data-driven normalization strategies for high-throughput quantitative RT-PCR. BMC Bioinform. 10 (2009) - [j1]Jessica Cara Mar
Decomposition of Gene Expression State Space Trajectories. PLoS Comput. Biol. 5(12) (2009)
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