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Aaron E. Darling
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2020 – today
- 2023
- [j12]Matthew Macaulay
, Aaron E. Darling
Fidelity of hyperbolic space for Bayesian phylogenetic inference. PLoS Comput. Biol. 19(4) (2023) - 2021
- [j11]Matthew Z. DeMaere
qc3C: Reference-free quality control for Hi-C sequencing data. PLoS Comput. Biol. 17(10) (2021)
2010 – 2019
- 2015
- [j10]David Coil
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data. Bioinform. 31(4): 587-589 (2015) - [i1]Michael Liu, Aaron E. Darling
Metagenomic Chromosome Conformation Capture (3C): techniques, applications, and challenges. F1000Research 4: 1377 (2015) - 2013
- [e1]Aaron E. Darling, Jens Stoye
Algorithms in Bioinformatics - 13th International Workshop, WABI 2013, Sophia Antipolis, France, September 2-4, 2013. Proceedings. Lecture Notes in Computer Science 8126, Springer 2013, ISBN 978-3-642-40452-8 [contents] - 2012
- [c5]Birte Kehr, Knut Reinert
Hidden Breakpoints in Genome Alignments. WABI 2012: 391-403 - 2011
- [j9]Aaron E. Darling
Mauve Assembly Metrics. Bioinform. 27(19): 2756-2757 (2011) - [j8]Oliver Attie, Aaron E. Darling
The rise and fall of breakpoint reuse depending on genome resolution. BMC Bioinform. 12(S-9): S1 (2011)
2000 – 2009
- 2009
- [j7]Andrés Esteban-Marcos, Aaron E. Darling
Seevolution: visualizing chromosome evolution. Bioinform. 25(7): 960-961 (2009) - [j6]Anna I. Rissman, Bob Mau, Bryan S. Biehl, Aaron E. Darling
Reordering contigs of draft genomes using the Mauve Aligner. Bioinform. 25(16): 2071-2073 (2009) - [j5]Todd J. Treangen, Aaron E. Darling
A Novel Heuristic for Local Multiple Alignment of Interspersed DNA Repeats. IEEE ACM Trans. Comput. Biol. Bioinform. 6(2): 180-189 (2009) - 2008
- [j4]Jeremy D. Glasner, Guy Plunkett III, Bradley D. Anderson, David J. Baumler, Bryan S. Biehl, Valerie Burland, Eric L. Cabot, Aaron E. Darling
Enteropathogen Resource Integration Center (ERIC): bioinformatics support for research on biodefense-relevant enterobacteria. Nucleic Acids Res. 36(Database-Issue): 519-523 (2008) - [c4]Todd J. Treangen, Aaron E. Darling, Mark A. Ragan
Gapped Extension for Local Multiple Alignment of Interspersed DNA Repeats. ISBRA 2008: 74-86 - 2006
- [j3]Jeremy D. Glasner, Michael Rusch, Paul Liss, Guy Plunkett III, Eric L. Cabot, Aaron E. Darling
ASAP: a resource for annotating, curating, comparing, and disseminating genomic data. Nucleic Acids Res. 34(Database-Issue): 41-45 (2006) - [c3]Aaron E. Darling, Todd J. Treangen, Louxin Zhang, Carla Kuiken, Xavier Messeguer, Nicole T. Perna:
Procrastination Leads to Efficient Filtration for Local Multiple Alignment. WABI 2006: 126-137 - 2004
- [j2]Aaron E. Darling
GRIL: genome rearrangement and inversion locator. Bioinform. 20(1): 122-124 (2004) - [c2]Aaron E. Darling, Bob Mau, Mark Craven, Nicole T. Perna:
Multiple Alignment of Rearranged Genomes. CSB 2004: 738-739 - [c1]Bob Mau, Aaron E. Darling, Nicole T. Perna:
Identifying Evolutionarily Conserved Segments Among Multiple Divergent and Rearranged Genomes. Comparative Genomics 2004: 72-84 - 2003
- [j1]Jeremy D. Glasner, Paul Liss, Guy Plunkett III, Aaron E. Darling
ASAP, a systematic annotation package for community analysis of genomes. Nucleic Acids Res. 31(1): 147-151 (2003)
Coauthor Index
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