Adversarial cycle-consistent synthesis of cerebral microbleeds for data augmentation.

Rashindra Manniesing https://scholar.google.com/citations?user=7q7x7QcAAAAJ https://orcid.org/0000-0002-4616-6298 https://www.wikidata.org/entity/Q40291988 https://www.researcherid.com/rid/G-9728-2015

Khrystyna Faryna Kevin Koschmieder Marcella M. Paul Thomas L. A. van den Heuvel Anke W. van der Eerden Rashindra Manniesing Bram van Ginneken Adversarial cycle-consistent synthesis of cerebral microbleeds for data augmentation. 2021 abs/2101.06468 CoRR https://arxiv.org/abs/2101.06468 db/journals/corr/corr2101.html#abs-2101-06468

Midas Meijs Frederick J. A. Meijer Mathias Prokop Bram van Ginneken Rashindra Manniesing Image-level detection of arterial occlusions in 4D-CTA of acute stroke patients using deep learning. 101810 2020 66 Medical Image Anal. https://doi.org/10.1016/j.media.2020.101810 https://www.wikidata.org/entity/Q99400617 db/journals/mia/mia66.html#MeijsMPGM20

Sil C. van de Leemput Mathias Prokop Bram van Ginneken Rashindra Manniesing Stacked Bidirectional Convolutional LSTMs for Deriving 3D Non-Contrast CT From Spatiotemporal 4D CT. 985-996 2020 39 IEEE Trans. Medical Imaging 4 https://doi.org/10.1109/TMI.2019.2939044 https://www.wikidata.org/entity/Q93101281 db/journals/tmi/tmi39.html#LeemputPGM20

Sil C. van de Leemput Midas Meijs Ajay Patel Frederick J. A. Meijer Bram van Ginneken Rashindra Manniesing Multiclass Brain Tissue Segmentation in 4D CT Using Convolutional Neural Networks. 51557-51569 2019 7 IEEE Access https://doi.org/10.1109/ACCESS.2019.2910348 https://www.wikidata.org/entity/Q127961831 db/journals/access/access7.html#LeemputMPMGM19

Ajay Patel Sil C. van de Leemput Mathias Prokop Bram van Ginneken Rashindra Manniesing Image Level Training and Prediction: Intracranial Hemorrhage Identification in 3D Non-Contrast CT. 92355-92364 2019 7 IEEE Access https://doi.org/10.1109/ACCESS.2019.2927792 https://www.wikidata.org/entity/Q127541183 db/journals/access/access7.html#PatelLPGM19

Sil C. van de Leemput Jonas Teuwen Bram van Ginneken Rashindra Manniesing MemCNN: A Python/PyTorch package for creating memory-efficient invertible neural networks. 1576 2019 4 J. Open Source Softw. 39 https://doi.org/10.21105/joss.01576 https://www.wikidata.org/entity/Q110502067 db/journals/jossw/jossw4.html#LeemputTGM19

Sil C. van de Leemput Jonas Teuwen Rashindra Manniesing MemCNN: a Framework for Developing Memory Efficient Deep Invertible Networks. 2018 ICLR (Workshop) https://openreview.net/forum?id=r1KzqK1wz conf/iclr/2018w db/conf/iclr/iclr2018w.html#LeemputTM18 Midas Meijs Rashindra Manniesing Artery and vein segmentation of the cerebral vasculature in 4D CT using a 3D fully convolutional neural network. 105751Q 2018 Computer-Aided Diagnosis https://doi.org/10.1117/12.2292974 conf/micad/2018 db/conf/micad/micad2018.html#MeijsM18 Ajay Patel Rashindra Manniesing A convolutional neural network for intracranial hemorrhage detection in non-contrast CT. 105751B 2018 Computer-Aided Diagnosis https://doi.org/10.1117/12.2292975 conf/micad/2018 db/conf/micad/micad2018.html#PatelM18 K. Standvoss T. Crijns L. Goerke D. Janssen Simon Kern T. van Niedek J. van Vugt N. Alfonso Burgos Emma J. Gerritse J. Mol D. van de Vooren Mohsen Ghafoorian Thomas L. A. van den Heuvel Rashindra Manniesing Cerebral microbleed detection in traumatic brain injury patients using 3D convolutional neural networks. 105751D 2018 Computer-Aided Diagnosis https://doi.org/10.1117/12.2294016 conf/micad/2018 db/conf/micad/micad2018.html#StandvossCGJKNV18 Mohsen Ghafoorian Jonas Teuwen Rashindra Manniesing Frank-Erik de Leeuw Bram van Ginneken Nico Karssemeijer Bram Platel Student beats the teacher: deep neural networks for lateral ventricles segmentation in brain MR. 105742U 2018 Image Processing https://doi.org/10.1117/12.2293569 conf/miip/2018 db/conf/miip/miip2018.html#GhafoorianTMLGK18

Mohsen Ghafoorian Jonas Teuwen Rashindra Manniesing Frank-Erik de Leeuw Bram van Ginneken Nico Karssemeijer Bram Platel Student Beats the Teacher: Deep Neural Networks for Lateral Ventricles Segmentation in Brain MR. 2018 abs/1801.05040 CoRR http://arxiv.org/abs/1801.05040 db/journals/corr/corr1801.html#abs-1801-05040

Ajay Patel Bram van Ginneken Frederick J. A. Meijer Ewoud J. van Dijk Mathias Prokop Rashindra Manniesing Robust cranial cavity segmentation in CT and CT perfusion images of trauma and suspected stroke patients. 216-228 2017 36 Medical Image Anal. https://doi.org/10.1016/j.media.2016.12.002 https://www.wikidata.org/entity/Q48384188 db/journals/mia/mia36.html#PatelGMDPM17

Ajay Patel Sil C. van de Leemput Mathias Prokop Bram van Ginneken Rashindra Manniesing Automatic cerebrospinal fluid segmentation in non-contrast CT images using a 3D convolutional network. 1013420 2017 Computer-Aided Diagnosis https://doi.org/10.1117/12.2254022 conf/micad/2017 db/conf/micad/micad2017.html#PatelLPGM17

K. Hameeteman Sietske Rozie Coert Metz Rashindra Manniesing Theo van Walsum Aad van der Lugt Wiro J. Niessen Stefan Klein 0001 Automatic carotid artery distensibility measurements from CTA using nonrigid registration. 515-524 2013 17 Medical Image Anal. 5 https://doi.org/10.1016/j.media.2013.02.007 https://www.wikidata.org/entity/Q57719772 db/journals/mia/mia17.html#HameetemanRMMWLNK13

André van der Avoird Ning Lin Bram van Ginneken Rashindra Manniesing A hardware implementation of a levelset algorithm for carotid lumen segmentation in CTA. 86691V 2013 Image Processing https://doi.org/10.1117/12.2007231 conf/miip/2013 db/conf/miip/miip2013.html#AvoirdLGM13 Hendrik O. A. Laue Marcel T. H. Oei L. Chen Ina Nora Kompan Horst K. Hahn Mathias Prokop Rashindra Manniesing Automated artery and vein detection in 4D-CT data with an unsupervised classification algorithm of the time intensity curves. 86691W 2013 Image Processing https://doi.org/10.1117/12.2008116 conf/miip/2013 db/conf/miip/miip2013.html#LaueOCKHPM13 Jan-Jurre Mordang Marcel T. H. Oei Rieneke van den Boom Ewoud J. Smit Mathias Prokop Bram van Ginneken Rashindra Manniesing A pattern recognition framework for vessel segmentation in 4D CT of the brain. 866919 2013 Image Processing https://doi.org/10.1117/12.2006824 conf/miip/2013 db/conf/miip/miip2013.html#MordangOBSPGM13 Rieneke van den Boom Marcel T. H. Oei Sven Lafebre Luuk J. Oostveen Frederick J. A. Meijer Stefan C. A. Steens Mathias Prokop Bram van Ginneken Rashindra Manniesing Brain tissue segmentation in 4D CT using voxel classification. 83144B 2012 Image Processing https://doi.org/10.1117/12.911189 conf/miip/2012 db/conf/miip/miip2012.html#BoomOLOMSPGM12 Azadeh Firouzian Rashindra Manniesing Coert T. Metz Stefan Klein 0001 Birgitta K. Velthuis Gabriel J. E. Rinkel Aad van der Lugt Wiro J. Niessen Intracranial aneurysm growth quantification in CTA. 831448 2012 Image Processing https://doi.org/10.1117/12.910713 https://www.wikidata.org/entity/Q57719813 conf/miip/2012 db/conf/miip/miip2012.html#FirouzianMMKVRL12 Marcel Koek Frederico Bastos Goncalves Don Poldermans Wiro J. Niessen Rashindra Manniesing Semi-automated Subcutaneous and Visceral Adipose Tissue Quantification in Computed Tomography. 215-222 2011 Abdominal Imaging https://doi.org/10.1007/978-3-642-28557-8_27 https://www.wikidata.org/entity/Q57719821 conf/miccai/2011col db/conf/miccai/col2011.html#KoekGPNM11 Danijela Vukadinovic Theo van Walsum Rashindra Manniesing Sietske Rozie Aad van der Lugt Wiro J. Niessen Region based level set segmentation of the outer wall of the carotid bifurcation in CTA. 79623P 2011 Image Processing https://doi.org/10.1117/12.878114 https://www.wikidata.org/entity/Q57719860 conf/miip/2011 db/conf/miip/miip2011.html#VukadinovicWMRL11

Rashindra Manniesing Michiel Schaap Sietske Rozie Reinhard Hameeteman Danijela Vukadinovic Aad van der Lugt Wiro J. Niessen Robust CTA lumen segmentation of the atherosclerotic carotid artery bifurcation in a large patient population. 759-769 2010 14 Medical Image Anal. 6 https://doi.org/10.1016/j.media.2010.05.001 https://www.wikidata.org/entity/Q42982259 db/journals/mia/mia14.html#ManniesingSRHVLN10

Danijela Vukadinovic Theo van Walsum Rashindra Manniesing Sietske Rozie Reinhard Hameeteman Thomas de Weert Aad van der Lugt Wiro J. Niessen Segmentation of the Outer Vessel Wall of the Common Carotid Artery in CTA. 65-76 2010 29 IEEE Trans. Medical Imaging 1 https://doi.org/10.1109/TMI.2009.2025702 https://www.wikidata.org/entity/Q51817451 db/journals/tmi/tmi29.html#VukadinovicWMRHWLN10

Azadeh Firouzian Rashindra Manniesing Zwenneke H. Flach Roelof Risselada Fop van Kooten Miriam C. J. M. Sturkenboom Aad van der Lugt Wiro J. Niessen Intracranial aneurysm segmentation in 3D CT angiography: method and quantitative validation. 76233M 2010 Image Processing https://doi.org/10.1117/12.843674 https://www.wikidata.org/entity/Q57719899 conf/miip/2010 db/conf/miip/miip2010.html#FirouzianMFRKSL10

Empar Rollano-Hijarrubia Rashindra Manniesing Wiro J. Niessen Selective Deblurring for Improved Calcification Visualization and Quantification in Carotid CT Angiography: Validation Using Micro-CT. 446-453 2009 28 IEEE Trans. Medical Imaging 3 https://doi.org/10.1109/TMI.2008.2006529 https://www.wikidata.org/entity/Q57719965 db/journals/tmi/tmi28.html#Rollano-HijarrubiaMN09

Danijela Vukadinovic Theo van Walsum Sietske Rozie Thomas de Weert Rashindra Manniesing Aad van der Lugt Wiro J. Niessen Carotid Artery Segmentation and Plaque Quantification in CTA. 835-838 2009 ISBI https://doi.org/10.1109/ISBI.2009.5193182 https://www.wikidata.org/entity/Q57719923 conf/isbi/2009 db/conf/isbi/isbi2009.html#VukadinovicWRWMLN09 Danijela Vukadinovic Theo van Walsum Rashindra Manniesing Aad van der Lugt Thomas de Weert Wiro J. Niessen AdaBoost classification for model-based segmentation of the outer wall of the common carotid artery in CTA. 691418 2008 Image Processing https://doi.org/10.1117/12.770232 https://www.wikidata.org/entity/Q57719971 conf/miip/2008 db/conf/miip/miip2008.html#VukadinovicWMLW08

Rashindra Manniesing Max A. Viergever Wiro J. Niessen Vessel Axis Tracking Using Topology Constrained Surface Evolution. 309-316 2007 26 IEEE Trans. Medical Imaging 3 https://doi.org/10.1109/TMI.2006.891503 https://www.wikidata.org/entity/Q42167750 db/journals/tmi/tmi26.html#ManniesingVN07

Michiel Schaap Rashindra Manniesing Ihor Smal Theo van Walsum Aad van der Lugt Wiro J. Niessen Bayesian Tracking of Tubular Structures and Its Application to Carotid Arteries in CTA. 562-570 2007 conf/miccai/2007-2 MICCAI (2) https://doi.org/10.1007/978-3-540-75759-7_68 https://www.wikidata.org/entity/Q62489504 db/conf/miccai/miccai2007-2.html#SchaapMSWLN07 Rashindra Manniesing Wiro J. Niessen Automatic segmentation of the internal carotid arteries through the skull base. 65120I 2007 Image Processing https://doi.org/10.1117/12.705201 https://www.wikidata.org/entity/Q57720008 conf/miip/2007 db/conf/miip/miip2007.html#ManniesingN07 Rashindra Manniesing Image Analysis in CT Angiography. 2006 Utrecht University, Netherlands http://dspace.library.uu.nl/handle/1874/13384 https://www.base-search.net/Record/96093866e6aa1c2e001ecc6a60db89a921d508f1b1575fc517b6374167bb9297 base-search.net (ftunivutrecht:oai:dspace.library.uu.nl:1874/13384)

Rashindra Manniesing Birgitta K. Velthuis Maarten S. van Leeuwen Irene C. van der Schaaf Peter Jan van Laar Wiro J. Niessen Level set based cerebral vasculature segmentation and diameter quantification in CT angiography. 200-214 2006 10 Medical Image Anal. 2 https://doi.org/10.1016/j.media.2005.09.001 https://www.wikidata.org/entity/Q51326965 db/journals/mia/mia10.html#ManniesingVLSLN06

Rashindra Manniesing Max A. Viergever Wiro J. Niessen Vessel enhancing diffusion: A scale space representation of vessel structures. 815-825 2006 10 Medical Image Anal. 6 https://doi.org/10.1016/j.media.2006.06.003 https://www.wikidata.org/entity/Q51154080 db/journals/mia/mia10.html#ManniesingVN06

Rashindra Manniesing Wiro J. Niessen Shape constrained vessel centerline extraction by integrating surface evolution and topology analysis. 165-168 2006 conf/isbi/2006 ISBI https://doi.org/10.1109/ISBI.2006.1624878 db/conf/isbi/isbi2006.html#ManniesingN06 Rashindra Manniesing Wiro J. Niessen Multiscale Vessel Enhancing Diffusion in CT Angiography Noise Filtering. 138-149 2005 conf/ipmi/2005 IPMI https://doi.org/10.1007/11505730_12 https://www.wikidata.org/entity/Q51050673 db/conf/ipmi/ipmi2005.html#ManniesingN05

Rashindra Manniesing Richard P. Kleihorst André van der Avoird Emile A. Hendriks Power Analysis of a General Convolution Algorithm Mapped on a Linear Processor Array. 5-19 2004 37 J. VLSI Signal Process. 1 https://doi.org/10.1023/B:VLSI.0000017000.91377.a7 db/journals/vlsisp/vlsisp37.html#ManniesingKAH04

Rashindra Manniesing Wiro J. Niessen Local Speed Functions in Level Set Based Vessel Segmentation. 475-482 https://doi.org/10.1007/978-3-540-30135-6_58 2004 conf/miccai/2004-1 MICCAI (1) db/conf/miccai/miccai2004-1.html#ManniesingN04 Rashindra Manniesing Birgitta K. Velthuis Maarten S. van Leeuwen Wiro J. Niessen Skeletonization for reinitialization in level-set-based vascular tree segmentation. 2004 Image Processing https://doi.org/10.1117/12.533045 https://www.wikidata.org/entity/Q57720058 conf/miip/2004 db/conf/miip/miip2004.html#ManniesingVLN04 Rashindra Manniesing Ireneusz Karkowski Henk Corporaal Automatic SIMD Parallelization of Embedded Applications Based on Pattern Recognition. 349-356 2000 conf/europar/2000 Euro-Par https://doi.org/10.1007/3-540-44520-X_46 db/conf/europar/europar2000.html#ManniesingKC00 André van der Avoird Rieneke van den Boom N. Alfonso Burgos L. Chen Henk Corporaal T. Crijns Ewoud J. van Dijk A. W. van der EerdenAnke W. van der Eerden Khrystyna Faryna Azadeh Firouzian Zwenneke H. Flach Emma J. Gerritse Mohsen Ghafoorian Bram van Ginneken L. Goerke Frederico Bastos Goncalves Horst K. Hahn Reinhard HameetemanK. Hameeteman Emile A. Hendriks Thomas L. A. van den Heuvel D. Janssen Ireneusz Karkowski Nico Karssemeijer Simon Kern Richard P. Kleihorst Stefan Klein 0001 Marcel Koek Ina Nora Kompan Fop van Kooten Kevin Koschmieder Peter Jan van Laar Sven Lafebre Hendrik LaueHendrik O. A. Laue Sil C. van de Leemput Frank-Erik de Leeuw Maarten S. van Leeuwen Ning Lin Aad van der Lugt Frederick J. A. Meijer Midas Meijs Coert MetzCoert T. Metz J. Mol Jan-Jurre Mordang T. van Niedek Wiro J. Niessen Marcel T. H. Oei Luuk J. Oostveen Ajay Patel Marcella M. Paul Bram Platel Don Poldermans Mathias Prokop Gabriel J. E. Rinkel Roelof Risselada Empar Rollano-Hijarrubia Sietske Rozie Irene C. van der Schaaf Michiel Schaap Ihor Smal Ewoud J. Smit K. Standvoss Stefan C. A. Steens Miriam C. J. M. Sturkenboom Jonas Teuwen Birgitta K. Velthuis Max A. Viergever D. van de Vooren J. van Vugt Danijela Vukadinovic Theo van Walsum Thomas de Weert