MRBrainS Challenge: Online Evaluation Framework for Brain Image Segmentation in 3T MRI Scans.

Fedde van der Lijn

Adriënne M. Mendrik Koen L. Vincken Hugo J. Kuijf Marcel Breeuwer Willem H. Bouvy Jeroen de Bresser Amir Alansary Marleen de Bruijne Aaron Carass Ayman El-Baz Amod Jog Ranveer Katyal Ali R. Khan Fedde van der Lijn Qaiser Mahmood Ryan Mukherjee Annegreet van Opbroek Sahil Paneri Sérgio Pereira Mikael Persson Martin Rajchl Duygu Sarikaya Örjan Smedby Carlos A. Silva 0002 Henri A. Vrooman Saurabh Vyas Chunliang Wang Liang Zhao 0018 Geert Jan Biessels Max A. Viergever MRBrainS Challenge: Online Evaluation Framework for Brain Image Segmentation in 3T MRI Scans. 813696:1-813696:16 2015 2015 Comput. Intell. Neurosci. https://doi.org/10.1155/2015/813696 https://www.wikidata.org/entity/Q36374500 db/journals/cin/cin2015.html#MendrikVKBBBABC15

Kai Yan Eugene Leung Fedde van der Lijn Henri A. Vrooman Miriam C. J. M. Sturkenboom Wiro J. Niessen IT Infrastructure to Support the Secondary Use of Routinely Acquired Clinical Imaging Data for Research. 65-81 2015 13 Neuroinformatics 1 https://doi.org/10.1007/s12021-014-9240-7 https://www.wikidata.org/entity/Q30843183 db/journals/ni/ni13.html#LeungLVSN15

Hakim C. Achterberg Dirk H. J. Poot Fedde van der Lijn Meike W. Vernooij Mohammad Arfan Ikram Wiro J. Niessen Marleen de Bruijne Local appearance features for robust MRI brain structure segmentation across scanning protocols. 866905 2013 Image Processing https://doi.org/10.1117/12.2006038 https://www.wikidata.org/entity/Q57604990 conf/miip/2013 db/conf/miip/miip2013.html#AchterbergPLVIN13

Fedde van der Lijn Benjamin F. J. Verhaaren Mohammad Arfan Ikram Stefan Klein 0001 Marleen de Bruijne Henri A. Vrooman Meike W. Vernooij Alexander Hammers Daniel Rueckert Aad van der Lugt Monique M. B. Breteler Wiro J. Niessen Automated measurement of local white matter lesion volume. 3901-3908 2012 59 NeuroImage 4 https://doi.org/10.1016/j.neuroimage.2011.11.021 https://www.wikidata.org/entity/Q44098097 db/journals/neuroimage/neuroimage59.html#LijnVIKBVVHRLBN12

Tom den Heijer Fedde van der Lijn Meike W. Vernooij Marius de Groot P. J. Koudstaal Aad van der Lugt Gabriel P. Krestin Albert Hofman Wiro J. Niessen Monique M. B. Breteler Structural and diffusion MRI measures of the hippocampus and memory performance. 1782-1789 2012 63 NeuroImage 4 https://doi.org/10.1016/j.neuroimage.2012.08.067 https://www.wikidata.org/entity/Q48384485 db/journals/neuroimage/neuroimage63.html#HeijerLVGKLKHNB12

Fedde van der Lijn Marleen de Bruijne Stefan Klein 0001 Tom den Heijer Yoo Young Hoogendam Aad van der Lugt Monique M. B. Breteler Wiro J. Niessen Automated Brain Structure Segmentation Based on Atlas Registration and Appearance Models. 276-286 2012 31 IEEE Trans. Medical Imaging 2 https://doi.org/10.1109/TMI.2011.2168420 https://www.wikidata.org/entity/Q48886713 db/journals/tmi/tmi31.html#LijnBKHHLBN12

Babak Ghafaryasl Fedde van der Lijn Marielle Poels Henri A. Vrooman Mohammad Arfan Ikram Wiro J. Niessen Aad van der Lugt Meike W. Vernooij Marleen de Bruijne A computer aided detection system for cerebral microbleeds in brain MRI. 138-141 2012 ISBI https://doi.org/10.1109/ISBI.2012.6235503 https://www.wikidata.org/entity/Q57605025 conf/isbi/2012 db/conf/isbi/isbi2012.html#GhafaryaslLPVINLVB12 Wiro J. Niessen Henri A. Vrooman Renske de Boer Fedde van der Lijn Hakim C. Achterberg Marcel Koek Stefan Klein 0001 Aad van der Lugt Marleen de Bruijne Mohammad Arfan Ikram Meike W. Vernooij Quantitative imaging biomarkers in neurologic disease: Population study perspective. 911 2012 ISBI https://doi.org/10.1109/ISBI.2012.6235699 https://www.wikidata.org/entity/Q57605027 conf/isbi/2012 db/conf/isbi/isbi2012.html#NiessenVBLAKKLBIV12 Valerio Fortunati René F. Verhaart Fedde van der Lijn Wiro J. Niessen Jifke F. Veenland Maarten M. Paulides Theo van Walsum Hyperthermia critical tissues automatic segmentation of head and neck CT images using atlas registration and graph cuts. 1683-1686 2012 ISBI https://doi.org/10.1109/ISBI.2012.6235902 https://www.wikidata.org/entity/Q57719810 conf/isbi/2012 db/conf/isbi/isbi2012.html#FortunatiVLNVPW12

Renske de Boer Michiel Schaap Fedde van der Lijn Henri A. Vrooman Marius de Groot Aad van der Lugt Mohammad Arfan Ikram Meike W. Vernooij Monique M. B. Breteler Wiro J. Niessen Statistical analysis of minimum cost path based structural brain connectivity. 557-565 2011 55 NeuroImage 2 https://doi.org/10.1016/j.neuroimage.2010.12.012 https://www.wikidata.org/entity/Q57621261 db/journals/neuroimage/neuroimage55.html#BoerSLVGLIVBN11

Stefan Klein 0001 Marco Loog Fedde van der Lijn Tom den Heijer Alexander Hammers Marleen de Bruijne Aad van der Lugt Robert P. W. Duin Monique M. B. Breteler Wiro J. Niessen Early diagnosis of dementia based on intersubject whole-brain dissimilarities. 249-252 2010 ISBI https://doi.org/10.1109/ISBI.2010.5490366 https://www.wikidata.org/entity/Q57605134 conf/isbi/2010 db/conf/isbi/isbi2010.html#KleinLLHHBLDBN10 Hakim C. Achterberg Fedde van der Lijn Tom den Heijer Aad van der Lugt Monique M. B. Breteler Wiro J. Niessen Marleen de Bruijne Prediction of Dementia by Hippocampal Shape Analysis. 42-49 2010 MLMI https://doi.org/10.1007/978-3-642-15948-0_6 https://www.wikidata.org/entity/Q57605144 conf/miccai/2010mlmi db/conf/miccai/mlmi2010.html#AchterbergLHLBNB10 Renske de Boer Michiel Schaap Fedde van der Lijn Henri A. Vrooman Marius de Groot Meike W. Vernooij Mohammad Arfan Ikram Evert F. S. van Velsen Aad van der Lugt Monique M. B. Breteler Statistical Analysis of Structural Brain Connectivity. 101-108 2010 MICCAI (2) https://doi.org/10.1007/978-3-642-15745-5_13 https://www.wikidata.org/entity/Q57719917 conf/miccai/2010-2 db/conf/miccai/miccai2010-2.html#BoerSLVGVIVLB10

Renske de Boer Henri A. Vrooman Fedde van der Lijn Meike W. Vernooij Mohammad Arfan Ikram Aad van der Lugt Monique M. B. Breteler Wiro J. Niessen White matter lesion extension to automatic brain tissue segmentation on MRI. 1151-1161 2009 45 NeuroImage 4 https://doi.org/10.1016/j.neuroimage.2009.01.011 https://www.wikidata.org/entity/Q48674009 db/journals/neuroimage/neuroimage45.html#BoerVLVILBN09

Fedde van der Lijn Marleen de Bruijne Yoo Young Hoogendam Stefan Klein 0001 Reinhard Hameeteman Monique M. B. Breteler Wiro J. Niessen Cerebellum Segmentation in MRI Using Atlas Registration and Local Multi-Scale Image Descriptors. 221-224 2009 ISBI https://doi.org/10.1109/ISBI.2009.5193023 https://www.wikidata.org/entity/Q57605151 conf/isbi/2009 db/conf/isbi/isbi2009.html#LijnBHKHBN09

Fedde van der Lijn Tom den Heijer Monique M. B. Breteler Wiro J. Niessen Hippocampus segmentation in MR images using atlas registration, voxel classification, and graph cuts. 708-720 2008 43 NeuroImage 4 https://doi.org/10.1016/j.neuroimage.2008.07.058 https://www.wikidata.org/entity/Q48943412 db/journals/neuroimage/neuroimage43.html#LijnHBN08

Henri A. Vrooman Chris A. Cocosco Fedde van der Lijn Rik Stokking Mohammad Arfan Ikram Meike W. Vernooij Monique M. B. Breteler Wiro J. Niessen Multi-spectral brain tissue segmentation using automatically trained k-Nearest-Neighbor classification. 71-81 2007 37 NeuroImage 1 https://doi.org/10.1016/j.neuroimage.2007.05.018 https://www.wikidata.org/entity/Q48134913 db/journals/neuroimage/neuroimage37.html#VroomanCLSIVBN07

Renske de Boer Fedde van der Lijn Henri A. Vrooman Meike W. Vernooij Mohammad Arfan Ikram Monique M. B. Breteler Wiro J. Niessen Automatic Segmentation of Brain Tissue Andwhitematter Lesions in MRI. 652-655 2007 ISBI https://doi.org/10.1109/ISBI.2007.356936 https://www.wikidata.org/entity/Q57720006 conf/isbi/2007 db/conf/isbi/isbi2007.html#BoerLVVIBN07 Fedde van der Lijn Meike W. Vernooij Mohammad Arfan Ikram Henri A. Vrooman Daniel Rueckert Alexander Hammers Monique M. B. Breteler Wiro J. Niessen Automated localization of periventricular and subcortical white matter lesions. 651232 2007 Image Processing https://doi.org/10.1117/12.710532 https://www.wikidata.org/entity/Q57720004 conf/miip/2007 db/conf/miip/miip2007.html#LijnVIVRHBN07 Hakim C. Achterberg Amir Alansary Geert Jan Biessels Renske de Boer Willem H. Bouvy Marcel Breeuwer Jeroen de Bresser Monique M. B. Breteler Marleen de Bruijne Aaron Carass Chris A. Cocosco Robert P. W. Duin Ayman El-Baz Valerio Fortunati Babak Ghafaryasl Marius de Groot Reinhard Hameeteman Alexander Hammers Tom den Heijer Albert Hofman Yoo Young Hoogendam Mohammad Arfan Ikram Amod Jog Ranveer Katyal Ali R. Khan Stefan Klein 0001 Marcel Koek P. J. Koudstaal Gabriel P. Krestin Hugo J. Kuijf Kai Yan Eugene Leung Marco Loog Aad van der Lugt Qaiser Mahmood Adriënne MendrikAdriënne M. Mendrik Ryan Mukherjee Wiro J. Niessen Annegreet van Opbroek Sahil Paneri Margarethus M. PaulidesMaarten M. Paulides Sérgio Pereira Mikael Persson Marielle Poels Dirk H. J. Poot Martin Rajchl Daniel Rueckert Duygu Sarikaya Michiel Schaap Carlos A. Silva 0002 Örjan Smedby Rik Stokking Miriam C. J. M. Sturkenboom Jifke F. Veenland Evert F. S. van Velsen Benjamin F. J. Verhaaren René F. Verhaart Meike W. Vernooij Max A. Viergever Koen L. Vincken Henri A. Vrooman Saurabh Vyas Theo van Walsum Chunliang Wang Liang Zhao 0018