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Alan R. Bishop
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2020 – today
- 2023
- [j12]Anowarul Kabir, Manish Bhattarai
, Kim Ø. Rasmussen, Amarda Shehu, Anny Usheva, Alan R. Bishop, Boian S. Alexandrov:
Examining DNA breathing with pyDNA-EPBD. Bioinform. 39(10) (2023) - 2020
- [j11]Christie L. Alappat
A Recursive Algebraic Coloring Technique for Hardware-efficient Symmetric Sparse Matrix-vector Multiplication. ACM Trans. Parallel Comput. 7(3): 19:1-19:37 (2020) - [c3]Christie L. Alappat
Understanding HPC Benchmark Performance on Intel Broadwell and Cascade Lake Processors. ISC 2020: 412-433 - [i5]Christie L. Alappat, Johannes Hofmann, Georg Hager, Holger Fehske, Alan R. Bishop, Gerhard Wellein:
Understanding HPC Benchmark Performance on Intel Broadwell and Cascade Lake Processors. CoRR abs/2002.03344 (2020)
2010 – 2019
- 2019
- [i4]Christie L. Alappat, Georg Hager, Olaf Schenk, Jonas Thies, Achim Basermann, Alan R. Bishop, Holger Fehske, Gerhard Wellein:
A Recursive Algebraic Coloring Technique for Hardware-Efficient Symmetric Sparse Matrix-Vector Multiplication. CoRR abs/1907.06487 (2019) - 2018
- [c2]Moritz Kreutzer, Dominik Ernst, Alan R. Bishop, Holger Fehske, Georg Hager
Chebyshev Filter Diagonalization on Modern Manycore Processors and GPGPUs. ISC 2018: 329-349 - [i3]Moritz Kreutzer, Georg Hager, Dominik Ernst, Holger Fehske, Alan R. Bishop, Gerhard Wellein:
Chebyshev Filter Diagonalization on Modern Manycore Processors and GPGPUs. CoRR abs/1803.02156 (2018) - 2016
- [j10]Ludmil B. Alexandrov
The role of structural parameters in DNA cyclization. BMC Bioinform. 17: 68 (2016) - [p1]Moritz Kreutzer, Jonas Thies
Performance Engineering and Energy Efficiency of Building Blocks for Large, Sparse Eigenvalue Computations on Heterogeneous Supercomputers. Software for Exascale Computing 2016: 317-338 - 2014
- [j9]Alexander I. Nesterov
Non-Hermitian quantum annealing in the antiferromagnetic Ising chain. Quantum Inf. Process. 13(2): 371-389 (2014) - [j8]Moritz Kreutzer, Georg Hager
A Unified Sparse Matrix Data Format for Efficient General Sparse Matrix-Vector Multiplication on Modern Processors with Wide SIMD Units. SIAM J. Sci. Comput. 36(5) (2014) - 2013
- [j7]Kristy Nowak-Lovato, Ludmil B. Alexandrov
Binding of Nucleoid-Associated Protein Fis to DNA Is Regulated by DNA Breathing Dynamics. PLoS Comput. Biol. 9(1) (2013) - [i2]Moritz Kreutzer, Georg Hager, Gerhard Wellein, Holger Fehske, Alan R. Bishop:
A unified sparse matrix data format for modern processors with wide SIMD units. CoRR abs/1307.6209 (2013) - 2012
- [c1]Moritz Kreutzer, Georg Hager
Sparse Matrix-vector Multiplication on GPGPU Clusters: A New Storage Format and a Scalable Implementation. IPDPS Workshops 2012: 1696-1702 - 2011
- [i1]Moritz Kreutzer, Georg Hager, Gerhard Wellein, Holger Fehske, Achim Basermann, Alan R. Bishop:
Sparse matrix-vector multiplication on GPGPU clusters: A new storage format and a scalable implementation. CoRR abs/1112.5588 (2011)
2000 – 2009
- 2009
- [j6]Boian S. Alexandrov
Toward a Detailed Description of the Thermally Induced Dynamics of the Core Promoter. PLoS Comput. Biol. 5(3) (2009) - 2007
- [j5]Ricardo Carretero-González, Panayotis G. Kevrekidis, Dimitri J. Frantzeskakis, Boris A. Malomed, S. Nandi, Alan R. Bishop:
Soliton trains and vortex streets as a form of Cerenkov radiation in trapped Bose-Einstein condensates. Math. Comput. Simul. 74(4-5): 361-369 (2007) - [j4]Panayotis G. Kevrekidis, Avinash Khare, Avadh Saxena, I. Bena, Alan R. Bishop:
Asymptotic calculation of discrete non-linear wave interactions. Math. Comput. Simul. 74(4-5): 405-413 (2007) - [j3]K. B. Blagoev, Bogdan Mihaila
Modelling the magnetic signature of neuronal tissue. NeuroImage 37(1): 137-148 (2007) - 2005
- [j2]Panayotis G. Kevrekidis, Boris A. Malomed, Dimitri J. Frantzeskakis, Alan R. Bishop, Hector E. Nistazakis, Ricardo Carretero-González:
Domain walls of single-component Bose-Einstein condensates in external potentials. Math. Comput. Simul. 69(3-4): 334-345 (2005)
1990 – 1999
- 1998
- [j1]Ángel Sánchez
Collective Coordinates and Length-Scale Competition in Spatially Inhomogeneous Soliton-Bearing Equations. SIAM Rev. 40(3): 579-615 (1998)
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