Evolution of metabolic network organization. - Mazurie, Aurélien; Bonchev, Danail; Schwikowski, Benno; Buck, Gregory A. (BMC Syst. Biol., 2010)

Computational Chemistry, Introduction to Complexity. - Bonchev, Danail (2009)

Phylogenetic distances are encoded in networks of interacting pathways. - Mazurie, Aurélien; Bonchev, Danail; Schwikowski, Benno; Buck, Gregory A. (Bioinform., 2008)

Data-driven Networking Reveals 5-Genes Signature for Early Detection of Lung Cancer. - Kuznetsov, Vladimir; Thomas, Sterling; Bonchev, Danail (2008)

Path-a-Way: A Strategy for Network Analysis of Microarray Data. - Arasappan, Dhivya; Mazurie, Aurélien; Alves, Joao; Bonchev, Danail; Buck, Gregory A. (2008)

Vertex-weightings for distance moments and thorny graphs. - Klein, Douglas J.; Doslic, Tomislav; Bonchev, Danail (Discret. Appl. Math., 2007)

From Molecular to Biological Structure and Back. - Bonchev, Danail; Buck, Gregory A. (J. Chem. Inf. Model., 2007)

Novel ZE-Isomerism Descriptors Derived from Molecular Topology and Their Application to QSAR Analysis. - Golbraikh, Alexander; Bonchev, Danail; Tropsha, Alexander (J. Chem. Inf. Comput. Sci., 2002)

Novel Chirality Descriptors Derived from Molecular Topology. - Golbraikh, Alexander; Bonchev, Danail; Tropsha, Alexander (J. Chem. Inf. Comput. Sci., 2001)

The Overall Wiener Index-A New Tool for Characterization of Molecular Topology. - Bonchev, Danail (J. Chem. Inf. Comput. Sci., 2001)

Topological Analysis of Long-Chain Branching Patterns in Polyolefins. - Bonchev, Danail; Markel, Eric; Dekmezian, Armen (J. Chem. Inf. Comput. Sci., 2001)

Overall Connectivities/Topological Complexities: A New Powerful Tool for QSPR/QSAR. - Bonchev, Danail (J. Chem. Inf. Comput. Sci., 2000)

Application of Graph Theory to Chemical Kinetics, 3. Topological Specificity of Multiroute Reaction Mechanisms. - Zeigarnik, Andrew V.; Temkin, Oleg N.; Bonchev, Danail (J. Chem. Inf. Comput. Sci., 1996)

Relative Atomic Moments as Squared Principal Eigenvector Coefficients. - Bonchev, Danail; Seitz, William A.; Gordeeva, Ekaterina (J. Chem. Inf. Comput. Sci., 1995)

Topological Atomic Charges, Valencies, and Bond Orders. - Bonchev, Danail; Gordeeva, Ekaterina (J. Chem. Inf. Comput. Sci., 1995)

Application of Graph Theory to Chemical Kinetics, Part 2. Topological Specificity of Single-Route Reaction Mechanisms. - Temkin, Oleg N.; Zeigarnik, Andrew V.; Bonchev, Danail (J. Chem. Inf. Comput. Sci., 1995)

Complementing the proof of the limit of relative atomic moments. - Gutman, Ivan; Bonchev, Danail; Seitz, William A.; Gordeeva, Ekaterina (J. Chem. Inf. Comput. Sci., 1995)

Enumeration, Coding, and Complexity of Linear Reaction Mechanisms. - Gordeeva, Ekaterina; Bonchev, Danail; Kamenski, Dimitar I.; Temkin, Oleg N. (J. Chem. Inf. Comput. Sci., 1994)

The microcomputer OASIS system for predicting the biological activity of chemical compounds. - Mekenyan, Ovanes G.; Karabunarliev, Stoyan; Bonchev, Danail (Comput. Chem., 1990)

Iterative procedure for the generalized graph center in polycyclic graphs. - Bonchev, Danail; Mekenyan, Ovanes G.; Balaban, Alexandru T. (J. Chem. Inf. Comput. Sci., 1989)

Topological centric coding and nomenclature of polycyclic hydrocarbons. 1. Condensed benzenoid systems (polyhexes, fusenes). - Bonchev, Danail; Balaban, Alexandru T. (J. Chem. Inf. Comput. Sci., 1981)

Generalization of the Graph Center Concept, and Derived Topological Centric Indexes. - Bonchev, Danail; Balaban, Alexandru T.; Mekenyan, Ovanes G. (J. Chem. Inf. Comput. Sci., 1980)