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François Képès
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2010 – 2019
- 2016
- [j14]Costas Bouyioukos
, Mohamed Elati
Analysis tools for the interplay between genome layout and regulation. BMC Bioinform. 17(S-5): 191 (2016) - [j13]Costas Bouyioukos
GREAT: a web portal for Genome Regulatory Architecture Tools. Nucleic Acids Res. 44(Webserver-Issue): W77-W82 (2016) - 2013
- [c4]Jonathan Passerat-Palmbach
Parallel stepwise stochastic simulation: harnessing GPUs to explore possible futures states of a chromosome folding model thanks to the possible futures algorithm (PFA). SIGSIM-PADS 2013: 169-178 - 2011
- [j12]Markus Kirkilionis
Introduction to special issue ECCS'09 in Theory in Biosciences. Theory Biosci. 130(3): 153 (2011) - [j11]Vic Norris
Computing with bacterial constituents, cells and populations: from bioputing to bactoputing. Theory Biosci. 130(3): 211-228 (2011) - [c3]Mohamed Elati
Boosting Binding Sites Prediction Using Gene's Positions. WABI 2011: 92-103 - 2010
- [j10]Pierre-Yves Bourguignon
Challenges in experimental data integration within genome-scale metabolic models. Algorithms Mol. Biol. 5: 20 (2010) - [j9]Ivan Junier, Joan Hérisson, François Képès:
Periodic pattern detection in sparse boolean sequences. Algorithms Mol. Biol. 5: 31 (2010) - [j8]Ivan Junier, Olivier C. Martin
Spatial and Topological Organization of DNA Chains Induced by Gene Co-localization. PLoS Comput. Biol. 6(2) (2010)
2000 – 2009
- 2009
- [c2]Matthieu Manceny, Marc Aiguier, Pascale Le Gall
Spatial Information and Boolean Genetic Regulatory Networks. BICoB 2009: 270-281 - 2008
- [j7]Mathieu Poudret, Agnès Arnould, Jean-Paul Comet, Pascale Le Gall, Philippe Meseure, François Képès:
Topology-based abstraction of complex biological systems: application to the Golgi apparatus. Theory Biosci. 127(2): 79-88 (2008) - 2007
- [j6]Anastasia Yartseva, Hanna Klaudel, Raymond R. Devillers, François Képès:
Incremental and unifying modelling formalism for biological interaction networks. BMC Bioinform. 8 (2007) - [j5]Anastasia Yartseva, Raymond R. Devillers, Hanna Klaudel, François Képès:
From MIN model to ordinary differential equations. J. Integr. Bioinform. 4(3) (2007) - [j4]Gilles Bernot, François Képès:
Chronique : Le programme d'épigénomique. Tech. Sci. Informatiques 26(1-2): 237-240 (2007) - 2006
- [j3]Pierre-Yves Bourguignon, Vincent Danos, François Képès, Serge Smidtas, Vincent Schächter:
Property-Driven Statistics of Biological Networks. Trans. Comp. Sys. Biology 6: 1-15 (2006) - [c1]Oriane Matte-Tailliez, Joan Hérisson, Nicolas Férey, Olivier Magneau, Pierre-Emmanuel Gros, François Képès, Rachid Gherbi
Yeast Naked DNA Spatial Organization Predisposes to Transcriptional Regulation. ICCSA (1) 2006: 222-231 - 2004
- [j2]Nicolas Omont
Transcription/replication collisions cause bacterial transcription units to be longer on the leading strand of replication. Bioinform. 20(16): 2719-2725 (2004) - 2003
- [j1]Alessandra Carbone
Codon adaptation index as a measure of dominating codon bias. Bioinform. 19(16): 2005-2015 (2003)
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