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Giulia Paciello
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2020 – today
- 2022
- [c9]Francesco Spinnato
, Riccardo Guidotti, Mirco Nanni, Daniele Maccagnola, Giulia Paciello, Antonio Bencini Farina:
Explaining Crash Predictions on Multivariate Time Series Data. DS 2022: 556-566 - 2021
- [j4]Alejandra Cervera
FUNGI: FUsioN Gene Integration toolset. Bioinform. 37(19): 3353-3355 (2021)
2010 – 2019
- 2018
- [c8]Orazio M. Scicolone, Giulia Paciello, Elisa Ficarra:
geneEx - A Novel Tool to Assess Differential Expression from Gene and Exon Sequencing Data. BIOINFORMATICS 2018: 174-181 - 2017
- [b1]Giulia Paciello:
Bioinformatics methods and tools for identifying disease-associated B-cell populations, miRNA patterns and gene fusions in RNA-Seq data. Polytechnic University of Turin, Italy, 2017 - [j3]Giulia Paciello, Elisa Ficarra
FuGePrior: A novel gene fusion prioritization algorithm based on accurate fusion structure analysis in cancer RNA-seq samples. BMC Bioinform. 18(1): 58:1-58:12 (2017) - 2016
- [j2]Gianvito Urgese
isomiR-SEA: an RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation. BMC Bioinform. 17: 148 (2016) - 2014
- [c7]Giulia Paciello, Andrea Acquaviva, Consalvo Petti, Claudio Isella, Enzo Medico
A Novel Pipeline for Identification and Prioritization of Gene Fusions in Patient-derived Xenografts of Metastatic Colorectal Cancer. BIOINFORMATICS 2014: 142-148 - [c6]Gianvito Urgese, Giulia Paciello, Claudio Isella, Enzo Medico, Enrico Macii, Elisa Ficarra, Andrea Acquaviva:
miR-SEA: miRNA Seed Extension based Aligner Pipeline for NGS Expression Level Extraction. IWBBIO 2014: 1015-1026 - [c5]Gianvito Urgese, Giulia Paciello, Andrea Acquaviva, Elisa Ficarra, Mariagrazia Graziano, Maurizio Zamboni:
Dynamic Gap Selector: A Smith Waterman Sequence Alignment Algorithm with Affine Gap Model Optimization. IWBBIO 2014: 1347-1358 - 2013
- [c4]Giulia Paciello, Elisa Ficarra, Alberto Zamò, Chiara Pighi, Carmelo Foti, Francesco Abate, Enrico Macii, Andrea Acquaviva:
A Novel Pipeline for V(D)J Junction Identification using RNA-Seq Paired-end Reads. BIOINFORMATICS 2013: 185-189 - 2012
- [j1]Francesco Abate, Andrea Acquaviva, Giulia Paciello, Carmelo Foti, Elisa Ficarra
Bellerophontes: an RNA-Seq data analysis framework for chimeric transcripts discovery based on accurate fusion model. Bioinform. 28(16): 2114-2121 (2012) - [c3]Francesco Abate, Giulia Paciello, Andrea Acquaviva, Elisa Ficarra, Alberto Ferrarini, Massimo Delledonne, Enrico Macii:
A Novel Analysis Flow for Fused Transcripts Discovery from Paired-end RNA-Seq Data. BIOINFORMATICS 2012: 331-334 - 2011
- [c2]Francesco Abate, Andrea Acquaviva, Elisa Ficarra
A novel framework for chimeric transcript detection based on accurate gene fusion model. BIBM Workshops 2011: 34-41 - [c1]Giulia Paciello, Andrea Acquaviva, Elisa Ficarra, M. A. Deriu, A. Grosso, Enrico Macii:
Binding Free Energy Calculation via Molecular Dynamics Simulations for a miRNA: mRNA Interaction. BIOINFORMATICS 2011: 318-321
Coauthor Index
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