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Tim J. P. Hubbard
Person information
- affiliation: King's College London, UK
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2020 – today
- 2023
- [j44]Adam Frankish
, Silvia Carbonell Sala
GENCODE: reference annotation for the human and mouse genomes in 2023. Nucleic Acids Res. 51(D1): 942-949 (2023) - 2021
- [j43]Adam Frankish
GENCODE 2021. Nucleic Acids Res. 49(Database-Issue): D916-D923 (2021)
2010 – 2019
- 2019
- [j42]Adam Frankish
GENCODE reference annotation for the human and mouse genomes. Nucleic Acids Res. 47(Database-Issue): D766-D773 (2019) - 2017
- [j41]Honghan Wu
Automated PDF highlighting to support faster curation of literature for Parkinson's and Alzheimer's disease. Database J. Biol. Databases Curation 2017: bax027 (2017) - 2016
- [c7]George Gkotsis, Anika Oellrich, Tim J. P. Hubbard, Richard J. B. Dobson
The language of mental health problems in social media. CLPsych@HLT-NAACL 2016: 63-73 - [c6]Matthias König, Anika Oellrich, Dagmar Waltemath, Richard J. B. Dobson, Tim J. P. Hubbard, Olaf Wolkenhauer:
Challenges and opportunities for system biology standards and tools in medical research. ODLS 2016: 1-6 - 2015
- [j40]Matthias Geihs, Ying Yan, Klaudia Walter, Jie Huang, Yasin Memari, Josine L. Min, Daniel Mead
An interactive genome browser of association results from the UK10K cohorts project. Bioinform. 31(24): 4029-4031 (2015) - 2014
- [j39]Paul Flicek
Ensembl 2014. Nucleic Acids Res. 42(Database-Issue): 749-755 (2014) - [j38]Catherine M. Farrell, Nuala A. O'Leary, Rachel A. Harte, Jane E. Loveland
Current status and new features of the Consensus Coding Sequence database. Nucleic Acids Res. 42(Database-Issue): 865-872 (2014) - 2013
- [j37]Paul Flicek
Ensembl 2013. Nucleic Acids Res. 41(Database-Issue): 48-55 (2013) - 2012
- [j36]Paul Flicek
Ensembl 2012. Nucleic Acids Res. 40(Database-Issue): 84-90 (2012) - 2011
- [j35]Thomas A. Down, Matias Piipari, Tim J. P. Hubbard:
Dalliance: interactive genome viewing on the web. Bioinform. 27(6): 889-890 (2011) - [j34]Paul Flicek, M. Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Yuan Chen, Peter Clapham, Guy Coates, Susan Fairley, Stephen Fitzgerald, Leo Gordon, Maurice Hendrix, Thibaut Hourlier, Nathan Johnson, Andreas Kähäri, Damian Keefe, Stephen Keenan, Rhoda Kinsella, Felix Kokocinski, Eugene Kulesha, Pontus Larsson, Ian Longden, William M. McLaren, Bert Overduin, Bethan Pritchard, Harpreet Singh Riat, Daniel Rios, Graham R. S. Ritchie, Magali Ruffier, Michael Schuster, Daniel Sobral, Giulietta Spudich, Y. Amy Tang, Stephen J. Trevanion, Jana Vandrovcova, Albert J. Vilella, Simon White, Steven P. Wilder, Amonida Zadissa, Jorge Zamora, Bronwen L. Aken, Ewan Birney, Fiona Cunningham, Ian Dunham, Richard Durbin, Xosé M. Fernández-Suárez, Javier Herrero, Tim J. P. Hubbard, Anne Parker, Glenn Proctor, Jan Vogel, Stephen M. J. Searle:
Ensembl 2011. Nucleic Acids Res. 39(Database-Issue): 800-806 (2011) - 2010
- [j33]Matias Piipari, Thomas A. Down, Harpreet Kaur Saini
iMotifs: an integrated sequence motif visualization and analysis environment. Bioinform. 26(6): 843-844 (2010) - [j32]Matias Piipari
Metamotifs - a generative model for building families of nucleotide position weight matrices. BMC Bioinform. 11: 348 (2010) - [j31]Paul Flicek
Ensembl's 10th year. Nucleic Acids Res. 38(Database-Issue): 557-562 (2010)
2000 – 2009
- 2009
- [j30]Guy Cochrane
Petabyte-scale innovations at the European Nucleotide Archive. Nucleic Acids Res. 37(Database-Issue): 19-25 (2009) - [j29]Tim J. P. Hubbard, Bronwen L. Aken
Ensembl 2009. Nucleic Acids Res. 37(Database-Issue): 690-697 (2009) - 2008
- [j28]Gabrielle A. Reeves
The Protein Feature Ontology: a tool for the unification of protein feature annotations. Bioinform. 24(23): 2767-2772 (2008) - [j27]Mutlu Dogruel
NestedMICA as an ab initio protein motif discovery tool. BMC Bioinform. 9 (2008) - [j26]Andrew M. Jenkinson
Integrating biological data - the Distributed Annotation System. BMC Bioinform. 9(S-8) (2008) - [j25]Guy Cochrane
Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database. Nucleic Acids Res. 36(Database-Issue): 5-12 (2008) - [j24]Antonina Andreeva
Data growth and its impact on the SCOP database: new developments. Nucleic Acids Res. 36(Database-Issue): 419-425 (2008) - [j23]Paul Flicek, Bronwen L. Aken, Kathryn Beal, Benoît Ballester
Ensembl 2008. Nucleic Acids Res. 36(Database-Issue): 707-714 (2008) - [j22]Laurens G. Wilming
The vertebrate genome annotation (Vega) database. Nucleic Acids Res. 36(Database-Issue): 753-760 (2008) - 2007
- [j21]Andreas Prlic
Integrating sequence and structural biology with DAS. BMC Bioinform. 8 (2007) - [j20]Antonina Andreeva
SISYPHUS - structural alignments for proteins with non-trivial relationships. Nucleic Acids Res. 35(Database-Issue): 253-259 (2007) - [j19]Tim J. P. Hubbard, Bronwen L. Aken, Kathryn Beal, Benoît Ballester
Ensembl 2007. Nucleic Acids Res. 35(Database-Issue): 610-617 (2007) - [j18]Thomas A. Down, Casey M. Bergman
Large-Scale Discovery of Promoter Motifs in Drosophila melanogaster. PLoS Comput. Biol. 3(1) (2007) - 2006
- [j17]Thomas A. Down, Bernard Leong, Tim J. P. Hubbard:
A machine learning strategy to identify candidate binding sites in human protein-coding sequence. BMC Bioinform. 7: 419 (2006) - [j16]Ewan Birney
Ensembl 2006. Nucleic Acids Res. 34(Database-Issue): 556-561 (2006) - [c5]Andreas Prlic
The Distributed Annotation System for Integration of Biological Data. DILS 2006: 195-203 - 2005
- [j15]Tim J. P. Hubbard, D. Andrews, Mario Cáccamo, Graham Cameron, Yuan Chen, Michele E. Clamp, Laura Clarke
Ensembl 2005. Nucleic Acids Res. 33(Database-Issue): 447-453 (2005) - [j14]J. L. Ashurst, C.-K. Chen, James G. R. Gilbert
The Vertebrate Genome Annotation (Vega) database. Nucleic Acids Res. 33(Database-Issue): 459-465 (2005) - [c4]Andreas Prlic
Adding Some SPICE to DAS. ECCB/JBI 2005: 41 - 2004
- [j13]Thomas A. Down, Tim J. P. Hubbard:
What can we learn from noncoding regions of similarity between genomes? BMC Bioinform. 5: 131 (2004) - [j12]Antonina Andreeva
SCOP database in 2004: refinements integrate structure and sequence family data. Nucleic Acids Res. 32(Database-Issue): 226-229 (2004) - [j11]Ewan Birney
Ensembl 2004. Nucleic Acids Res. 32(Database-Issue): 468-470 (2004) - 2003
- [j10]Diego di Bernardo
ddbRNA: detection of conserved secondary structures in multiple alignments. Bioinform. 19(13): 1606-1611 (2003) - [j9]Michele E. Clamp, T. Daniel Andrews, Daniel Barker, Paul Bevan
Ensembl 2002: accommodating comparative genomics. Nucleic Acids Res. 31(1): 38-42 (2003) - 2002
- [j8]Raphaël Leplae, Tim J. P. Hubbard:
MaxBench: evaluation of sequence and structure comparison methods. Bioinform. 18(3): 494-495 (2002) - [j7]Tim J. P. Hubbard, Daniel Barker, Ewan Birney
The Ensembl genome database project. Nucleic Acids Res. 30(1): 38-41 (2002) - [j6]Loredana Lo Conte, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin:
SCOP database in 2002: refinements accommodate structural genomics. Nucleic Acids Res. 30(1): 264-267 (2002) - [c3]Tim J. P. Hubbard:
Biological information: making it accessible and integrated (and trying to make sense of it). ECCB 2002: 140-140 - 2000
- [j5]Matthew R. Pocock, Tim J. P. Hubbard:
A browser for expression data. Bioinform. 16(4): 402-403 (2000) - [j4]Loredana Lo Conte, Bart Ailey, Tim J. P. Hubbard, Steven E. Brenner, Alexey G. Murzin, Cyrus Chothia:
SCOP: a Structural Classification of Proteins database. Nucleic Acids Res. 28(1): 257-259 (2000)
1990 – 1999
- 1999
- [j3]Tim J. P. Hubbard, Bart Ailey, Steven E. Brenner, Alexey G. Murzin, Cyrus Chothia:
SCOP: a Structural Classification of Proteins database. Nucleic Acids Res. 27(1): 254-256 (1999) - 1998
- [j2]Matthew R. Pocock, Tim J. P. Hubbard, Ewan Birney
SPEM: a parser for EMBL style flat file database entries. Bioinform. 14(9): 823-824 (1998) - 1997
- [j1]Tim J. P. Hubbard, Alexey G. Murzin, Steven E. Brenner, Cyrus Chothia:
SCOP: a structural classification of proteins database. Nucleic Acids Res. 25(1): 236-239 (1997) - 1995
- [c2]Steven E. Brenner, Tim J. P. Hubbard:
A Specification for Defining and Annotating Regions of Macromolecular Structures. ISMB 1995: 66-74 - 1994
- [c1]Tim J. P. Hubbard:
Use of beta-strand Interaction Pseudo-Potentials in Protein Structure Prediction and Modeling. HICSS (5) 1994: 336-344
Coauthor Index
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last updated on 2024-10-07 21:25 CEST by the dblp team
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