CoSTI: Consistency Models for (a faster) Spatio-Temporal Imputation - Javier Solís-García; Belén Vega-Márquez; Juan A. Nepomuceno; Isabel A. Nepomuceno-Chamorro (CoRR, 2025)

TIMBA: Time series Imputation with Bi-directional Mamba Blocks and Diffusion models - Javier Solís-García; Belén Vega-Márquez; Juan A. Nepomuceno; Isabel A. Nepomuceno-Chamorro (CoRR, 2024)

Comparing artificial intelligence strategies for early sepsis detection in the ICU: an experimental study - Javier Solís-García; Belén Vega-Márquez; Juan A. Nepomuceno; José Cristóbal Riquelme Santos; Isabel A. Nepomuceno-Chamorro (Appl. Intell., 2023)

Generating Synthetic Fetal Cardiotocography Data with Conditional Generative Adversarial Networks - Halal Abdulrahman Ahmed; Juan A. Nepomuceno; Belén Vega-Márquez; Isabel A. Nepomuceno-Chamorro (18th International Conference on Soft Computing Models in Industrial and Environmental Applications (SOCO 2023) - Salamanca, Spain, September 5-7, 2023, Proceedings, Volume 2, 2023)

Using prior knowledge in the inference of gene association networks - Isabel A. Nepomuceno-Chamorro; Juan A. Nepomuceno; José Luis Galván-Rojas; Belén Vega-Márquez; Cristina Rubio-Escudero (Appl. Intell., 2020)

An application of the Shapley value to the analysis of co-expression networks - Giulia Cesari; Encarnación Algaba; Stefano Moretti; Juan A. Nepomuceno (Appl. Netw. Sci., 2018)

Pairwise gene GO-based measures for biclustering of high-dimensional expression data - Juan A. Nepomuceno; Alicia Troncoso; Isabel A. Nepomuceno-Chamorro; Jesús S. Aguilar-Ruiz (BioData Min., 2018)

A Game Theoretic Neighbourhood-Based Relevance Index - Giulia Cesari; Encarnación Algaba; Stefano Moretti; Juan A. Nepomuceno (Complex Networks & Their Applications VI - Proceedings of Complex Networks 2017 (The Sixth International Conference on Complex Networks and Their Applications), COMPLEX NETWORKS 2017, Lyon, France, November 29 - December 1, 2017, 2017)

Biclustering of Gene Expression Data Based on SimUI Semantic Similarity Measure - Juan A. Nepomuceno; Alicia Troncoso; Isabel A. Nepomuceno-Chamorro; Jesús S. Aguilar-Ruiz (Hybrid Artificial Intelligent Systems - 11th International Conference, HAIS 2016, Seville, Spain, April 18-20, 2016, Proceedings, 2016)

Scatter search-based identification of local patterns with positive and negative correlations in gene expression data - Juan A. Nepomuceno; Alicia Troncoso; Jesús S. Aguilar-Ruiz (Appl. Soft Comput., 2015)

Integrating biological knowledge based on functional annotations for biclustering of gene expression data - Juan A. Nepomuceno; Alicia Troncoso Lora; Isabel A. Nepomuceno-Chamorro; Jesús S. Aguilar-Ruiz (Comput. Methods Programs Biomed., 2015)

Biclustering of Gene Expression Data by Correlation-Based Scatter Search - Juan A. Nepomuceno; Alicia Troncoso Lora; Jesús S. Aguilar-Ruiz (BioData Min., 2011)

Inferring gene coexpression networks with Biclustering based on Scatter Search - Juan A. Nepomuceno; Alicia Troncoso Lora; Jesús S. Aguilar-Ruiz (11th International Conference on Intelligent Systems Design and Applications, ISDA 2011, Córdoba, Spain, November 22-24, 2011, 2011)

A local search in Scatter Search for improving Biclusters - Juan A. Nepomuceno; Alicia Troncoso Lora; Jesús S. Aguilar-Ruiz (Third World Congress on Nature & Biologically Inspired Computing, NaBIC 2011, Salamanca, Spain, October 19-21, 2011, 2011)

Correlation-Based Scatter Search for Discovering Biclusters from Gene Expression Data - Juan A. Nepomuceno; Alicia Troncoso Lora; Jesús S. Aguilar-Ruiz (Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, 8th European Conference, EvoBIO 2010, Istanbul, Turkey, April 7-9, 2010. Proceedings, 2010)

Evolutionary metaheuristic for biclustering based on linear correlations among genes - Juan A. Nepomuceno; Alicia Troncoso Lora; Jesús S. Aguilar-Ruiz (Proceedings of the 2010 ACM Symposium on Applied Computing (SAC), Sierre, Switzerland, March 22-26, 2010, 2010)

An Overlapping Control-Biclustering Algorithm from Gene Expression Data - Juan A. Nepomuceno; Alicia Troncoso Lora; Jesús S. Aguilar-Ruiz (Ninth International Conference on Intelligent Systems Design and Applications, ISDA 2009, Pisa, Italy , November 30-December 2, 2009, 2009)

A Hybrid Metaheuristic for Biclustering Based on Scatter Search and Genetic Algorithms - Juan A. Nepomuceno; Alicia Troncoso Lora; Jesús S. Aguilar-Ruiz (Pattern Recognition in Bioinformatics, 4th IAPR International Conference, PRIB 2009, Sheffield, UK, September 7-9, 2009. Proceedings, 2009)

Biclusters Evaluation Based on Shifting and Scaling Patterns - Juan A. Nepomuceno; Alicia Troncoso Lora; Jesús S. Aguilar-Ruiz; Jorge García-Gutiérrez (Intelligent Data Engineering and Automated Learning - IDEAL 2007, 8th International Conference, Birmingham, UK, December 16-19, 2007, Proceedings, 2007)

Databases Reduction Simultaneously by Ordered Projection - Isabel A. Nepomuceno-Chamorro; Juan A. Nepomuceno; Roberto Ruiz Sánchez; Jesús S. Aguilar-Ruiz (Discovery Science, 9th International Conference, DS 2006, Barcelona, Spain, October 7-10, 2006, Proceedings, 2006)

A Measure for Data Set Editing by Ordered Projections - Jesús S. Aguilar-Ruiz; Juan A. Nepomuceno; Norberto Díaz-Díaz; Isabel A. Nepomuceno-Chamorro (Advances in Applied Artificial Intelligence, 19th International Conference on Industrial, Engineering and Other Applications of Applied Intelligent Systems, IEA/AIE 2006, Annecy, France, June 27-30, 2006, Proceedings, 2006)

RESOP: Un método para la reducción de Bases de Datos - Isabel A. Nepomuceno-Chamorro; Juan A. Nepomuceno; Roberto Ruiz Sánchez (XI Jornadas de Ingeniería del Software y Bases de Datos (JISBD 2006), Octubre 3-6, 2006, Sitges, Barcelona, Spain, 2006)