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2020 – today

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2024
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Francisco Abad Navarro, Catalina Martínez-Costa:
A knowledge graph-based data harmonization framework for secondary data reuse. Comput. Methods Programs Biomed. 243: 107918 (2024)
2023
[j12]
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Francisco Abad Navarro, Catalina Martínez-Costa, Jesualdo Tomás Fernández-Breis:
HURON: A Quantitative Framework for Assessing Human Readability in Ontologies. IEEE Access 11: 101833-101851 (2023)
[j11]
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Stefan Schulz, James T. Case, Peter Hendler, Daniel Karlsson, Michael Lawley, Ronald Cornet, Robert R. Hausam, Harold Solbrig, Karim Nashar, Catalina Martínez-Costa, Yongsheng Gao:
SNOMED CT and Basic Formal Ontology - convergence or contradiction between standards? The case of "clinical finding". Appl. Ontology 18(3): 207-237 (2023)
[j10]
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Javier Castell-Díaz, José Antonio Miñarro-Giménez, Catalina Martínez-Costa:
Supporting SNOMED CT postcoordination with knowledge graph embeddings. J. Biomed. Informatics 139: 104297 (2023)
[c29]
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José Antonio Miñarro-Giménez, Carlos Fernández-Llatas, Begoña Martínez-Salvador, Catalina Martínez-Costa, Mar Marcos, Jesualdo Tomás Fernández-Breis:
Ontology Model for Supporting Process Mining on Healthcare-Related Data. AIME 2023: 352-356
2022
[c28]
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Saadullah Amin, Noon Pokaratsiri Goldstein, Morgan Kelly Wixted, Alejandro García-Rudolph, Catalina Martínez-Costa, Guenter Neumann:
Few-Shot Cross-lingual Transfer for Coarse-grained De-identification of Code-Mixed Clinical Texts. BioNLP@ACL 2022: 200-211
[i1]
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  - journals/corr/abs-2204-04775
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Saadullah Amin, Noon Pokaratsiri Goldstein, Morgan Kelly Wixted, Alejandro García-Rudolph, Catalina Martínez-Costa, Günter Neumann:
Few-Shot Cross-lingual Transfer for Coarse-grained De-identification of Code-Mixed Clinical Texts. CoRR abs/2204.04775 (2022)
2021
[j9]
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Francisco Abad Navarro, Catalina Martínez-Costa, Jesualdo Tomás Fernández-Breis:
Semankey: A Semantics-Driven Approach for Querying RDF Repositories Using Keywords. IEEE Access 9: 91282-91302 (2021)
[c27]
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Catalina Martínez-Costa, Francisco Abad Navarro:
Towards a Semantic Data Harmonization Federated Infrastructure. MIE 2021: 38-42

2010 – 2019

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2019
[c26]
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Mercedes Argüello Casteleiro, Catalina Martínez-Costa, Julio Des-Diz, Nava Maroto, Maria Jesus Fernandez Prieto, Robert Stevens:
From SNOMED CT Expressions to an FHIR RDF Representation: Exploring the Benefits of an Ontology-Based Approach. JOWO 2019
[c25]
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Catalina Martínez-Costa, José Antonio Miñarro-Giménez, Robert R. Hausam, Stefan Schulz:
Addressing the Negation Gap in SNOMED CT by Reified Negated Concepts. JOWO 2019
[c24]
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Philipp Daumke, Kai U. Heitmann, Simone Heckmann, Catalina Martínez-Costa, Stefan Schulz:
Clinical Text Mining on FHIR. MedInfo 2019: 83-87
2017
[j8]
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  - journals/jbi/Martinez-CostaS17
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Catalina Martínez-Costa, Stefan Schulz:
Validating EHR clinical models using ontology patterns. J. Biomed. Informatics 76: 124-137 (2017)
[c23]
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Markus Kreuzthaler, Catalina Martínez-Costa, Peter Kaiser, Stefan Schulz:
Semantic Technologies for Re-Use of Clinical Routine Data. eHealth 2017: 24-31
[c22]
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Zdenko Kasác, Catalina Martínez-Costa, Markus Kreuzthaler, Stefan Schulz:
Basics of a Drug Ontology for Annotations of Clinical Narratives. JOWO 2017
[c21]
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Stefan Schulz, Catalina Martínez-Costa, José Antonio Miñarro-Giménez:
Lexical Ambiguity in SNOMED CT. JOWO 2017
[c20]
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Mercedes Argüello Casteleiro, Catalina Martínez-Costa, Jose Julio Des Diz, Maria Jesus Fernandez Prieto, Chris Wroe, Diego Maseda-Fernandez, George Demetriou, Goran Nenadic, John A. Keane, Stefan Schulz, Robert Stevens:
Experiments to Create Ontology-based Disease Models for Diabetic Retinopathy from Different Biomedical Resources. SWAT4LS 2017
2016
[j7]
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María Del Carmen Legaz-García, Catalina Martínez-Costa, Marcos Menárguez Tortosa, Jesualdo Tomás Fernández-Breis:
A semantic web based framework for the interoperability and exploitation of clinical models and EHR data. Knowl. Based Syst. 105: 175-189 (2016)
[c19]
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José Antonio Miñarro-Giménez, Catalina Martínez-Costa, Stefan Schulz:
Qualitative assessment of annotations using SNOMED CT. ODLS 2016: 1-2
2015
[j6]
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Catalina Martínez-Costa, Ronald Cornet, Daniel Karlsson, Stefan Schulz, Dipak Kalra:
Semantic enrichment of clinical models towards semantic interoperability. The heart failure summary use case. J. Am. Medical Informatics Assoc. 22(3): 565-576 (2015)
[c18]
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José Antonio Miñarro-Giménez, Markus Kreuzthaler, Johannes Bernhardt-Melischnig, Catalina Martínez-Costa, Stefan Schulz:
Acquiring Plausible Predications from MEDLINE by Clustering MeSH Annotations. MedInfo 2015: 716-720
[c17]
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Stefan Schulz, Catalina Martínez-Costa:
Harmonizing SNOMED CT with BioTopLite: An Exercise in Principled Ontology Alignment. MedInfo 2015: 832-836
[c16]
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Catalina Martínez-Costa, Stephen Kay, Nicholas Oughtibridge, Stefan Schulz:
ContSys under Ontological Scrutiny. MIE 2015: 999
2014
[c15]
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Catalina Martínez-Costa, María Del Carmen Legaz-García, Stefan Schulz, Jesualdo Tomás Fernández-Breis:
Ontology-based infrastructure for a meaningful EHR representation and use. BHI 2014: 535-538
[c14]
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Catalina Martínez-Costa, Stefan Schulz:
Ontology Content Patterns as Bridge for the Semantic Representation of Clinical Information. eHealth 2014: 247
[c13]
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Stefan Schulz, Catalina Martínez-Costa, Daniel Karlsson, Ronald Cornet, Mathias Brochhausen, Alan L. Rector:
An Ontological Analysis of Reference in Health Record Statements. FOIS 2014: 289-302
[c12]
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Catalina Martínez-Costa, Dipak Kalra, Stefan Schulz:
Improving EHR Semantic Interoperability: Future Vision and Challenges. MIE 2014: 589-593
[c11]
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María Del Carmen Legaz-García, Catalina Martínez-Costa, José Antonio Miñarro-Giménez, Jesualdo Tomás Fernández-Breis, Stefan Schulz, Marcos Menárguez Tortosa:
Ontology patterns-based transformation of clinical information. MIE 2014: 1018-1022
[c10]
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José Antonio Miñarro-Giménez, Catalina Martínez-Costa, Stefan Schulz:
Using concept co-occurrences for a biomedical facts acquisition. MIE 2014: 1200
[c9]
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Catalina Martínez-Costa, Daniel Karlsson, Stefan Schulz:
Ontology Patterns for Clinical Information Modelling. WOP 2014: 61-72
2013
[c8]
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Stefan Schulz, Catalina Martínez-Costa:
How Ontologies Can Improve Semantic Interoperability in Health Care. KR4HC/ProHealth 2013: 1-10
[c7]
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Catalina Martínez-Costa, Stefan Schulz:
Ontology-Based Reengineering of the SNOMED CT Context Model. AIME 2013: 216-220
[c6]
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Catalina Martínez-Costa, Stefan Schulz:
Ontology-based reinterpretation of the SNOMED CT context model. ICBO 2013: 90-95
[c5]
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Catalina Martínez-Costa, Diego Boscá, María Del Carmen Legaz-García, Cui Tao, Jesualdo Tomás Fernández-Breis, Stefan Schulz, Christopher G. Chute:
Isosemantic Rendering of Clinical Information Using Formal Ontologies and RDF. MedInfo 2013: 1085
2012
[j5]
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José Alberto Maldonado, Catalina Martínez-Costa, David Moner, Marcos Menárguez Tortosa, Diego Boscá, José Antonio Miñarro-Giménez, Jesualdo Tomás Fernández-Breis, Montserrat Robles:
Using the ResearchEHR platform to facilitate the practical application of the EHR standards. J. Biomed. Informatics 45(4): 746-762 (2012)
[j4]
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Marcos Menárguez Tortosa, Catalina Martínez-Costa, Jesualdo Tomás Fernández-Breis:
A Generative Tool for Building Health Applications Driven by ISO 13606 Archetypes. J. Medical Syst. 36(5): 3063-3075 (2012)
[c4]
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María Del Carmen Legaz-García, Catalina Martínez-Costa, Marcos Menárguez Tortosa, Jesualdo Tomás Fernández-Breis:
Exploitation of ontologies for the management of clinical archetypes in ArchMS. ICBO 2012
2011
[j3]
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Catalina Martínez-Costa, Marcos Menárguez Tortosa, Jesualdo Tomás Fernández-Breis:
Clinical data interoperability based on archetype transformation. J. Biomed. Informatics 44(5): 869-880 (2011)
2010
[j2]
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Catalina Martínez-Costa, Marcos Menárguez Tortosa, Jesualdo Tomás Fernández-Breis:
An approach for the semantic interoperability of ISO EN 13606 and OpenEHR archetypes. J. Biomed. Informatics 43(5): 736-746 (2010)
[c3]
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Montserrat Robles, Jesualdo Tomás Fernández-Breis, José Alberto Maldonado, David Moner, Catalina Martínez-Costa, Diego Boscá, Marcos Menárguez Tortosa:
ResearchEHR: Use of semantic web technologies and archetypes for the description of EHRs. EFMI-STC 2010: 129-135
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Catalina Martínez-Costa, José Antonio Miñarro-Giménez, Marcos Menárguez Tortosa, Rafael Valencia-García, Jesualdo Tomás Fernández-Breis:
Flexible Semantic Querying of Clinical Archetypes. KES (1) 2010: 597-606

2000 – 2009

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2009
[j1]
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Catalina Martínez-Costa, Marcos Menárguez Tortosa, Jesualdo Tomás Fernández-Breis, José Alberto Maldonado:
A model-driven approach for representing clinical archetypes for Semantic Web environments. J. Biomed. Informatics 42(1): 150-164 (2009)
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Catalina Martínez-Costa, Marcos Menárguez Tortosa, Jesualdo Tomás Fernández-Breis:
Towards ISO 13606 and openEHR Archetype-Based Semantic Interoperability. MIE 2009: 260-264

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