BibTeX records: Yue Joseph Wang

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@article{DBLP:journals/bioinformatics/KommuWWW25,
  author       = {Sindhura Kommu and
                  Yizhi Wang and
                  Yue Wang and
                  Xuan Wang},
  title        = {Prediction of gene regulatory connections with joint single-cell foundation
                  models and graph-based learning},
  journal      = {Bioinform.},
  volume       = {41},
  number       = {Supplement{\_}1},
  pages        = {i619--i627},
  year         = {2025},
  url          = {https://doi.org/10.1093/bioinformatics/btaf217},
  doi          = {10.1093/BIOINFORMATICS/BTAF217},
  timestamp    = {Mon, 02 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KommuWWW25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/DaiZCKZLWWCL25,
  author       = {Rujia Dai and
                  Ming Zhang and
                  Tianyao Chu and
                  Richard Kopp and
                  Chunling Zhang and
                  Kefu Liu and
                  Yue Wang and
                  Xusheng Wang and
                  Chao Chen and
                  Chunyu Liu},
  title        = {Precision and Accuracy in Quantitative Measurement of Gene Expression
                  from Single-cell/nucleus {RNA} Sequencing Data},
  journal      = {Genom. Proteom. Bioinform.},
  volume       = {23},
  number       = {4},
  year         = {2025},
  url          = {https://doi.org/10.1093/gpbjnl/qzaf077},
  doi          = {10.1093/GPBJNL/QZAF077},
  timestamp    = {Fri, 09 Jan 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/gpb/DaiZCKZLWWCL25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2512-00283,
  author       = {Yi Fang and
                  Haoran Xu and
                  Jiaxin Han and
                  Sirui Ding and
                  Yizhi Wang and
                  Yue Wang and
                  Xuan Wang},
  title        = {BioArc: Discovering Optimal Neural Architectures for Biological Foundation
                  Models},
  journal      = {CoRR},
  volume       = {abs/2512.00283},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2512.00283},
  doi          = {10.48550/ARXIV.2512.00283},
  eprinttype   = {arXiv},
  eprint       = {2512.00283},
  timestamp    = {Sat, 11 Apr 2026 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2512-00283.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WuDCDLYBPZCHW24,
  author       = {Chiung{-}Ting Wu and
                  Dongping Du and
                  Lulu Chen and
                  Rujia Dai and
                  Chunyu Liu and
                  Guoqiang Yu and
                  Saurabh Bhardwaj and
                  Sarah J. Parker and
                  Zhen Zhang and
                  Robert Clarke and
                  David M. Herrington and
                  Yue Wang},
  title        = {{CAM3.0:} determining cell type composition and expression from bulk
                  tissues with fully unsupervised deconvolution},
  journal      = {Bioinform.},
  volume       = {40},
  number       = {3},
  year         = {2024},
  url          = {https://doi.org/10.1093/bioinformatics/btae107},
  doi          = {10.1093/BIOINFORMATICS/BTAE107},
  timestamp    = {Sat, 08 Jun 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WuDCDLYBPZCHW24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FuLWZZY0CHW24,
  author       = {Yi Fu and
                  Yingzhou Lu and
                  Yizhi Wang and
                  Bai Zhang and
                  Zhen Zhang and
                  Guoqiang Yu and
                  Chunyu Liu and
                  Robert Clarke and
                  David M. Herrington and
                  Yue Wang},
  title        = {{DDN3.0:} determining significant rewiring of biological network structure
                  with differential dependency networks},
  journal      = {Bioinform.},
  volume       = {40},
  number       = {6},
  year         = {2024},
  url          = {https://doi.org/10.1093/bioinformatics/btae376},
  doi          = {10.1093/BIOINFORMATICS/BTAE376},
  timestamp    = {Sun, 01 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/FuLWZZY0CHW24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jdi/XiaFFWFK23,
  author       = {Tian Xia and
                  Xiaohang Fu and
                  Michael J. Fulham and
                  Yue Wang and
                  David Feng and
                  Jinman Kim},
  title        = {CT-based Radiogenomics Framework for {COVID-19} Using {ACE2} Imaging
                  Representations},
  journal      = {J. Digit. Imaging},
  volume       = {36},
  number       = {6},
  pages        = {2356--2366},
  year         = {2023},
  url          = {https://doi.org/10.1007/s10278-023-00895-w},
  doi          = {10.1007/S10278-023-00895-W},
  timestamp    = {Thu, 18 Jul 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jdi/XiaFFWFK23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenWLDLCYEHW22,
  author       = {Lulu Chen and
                  Chiung{-}Ting Wu and
                  Chia{-}Hsiang Lin and
                  Rujia Dai and
                  Chunyu Liu and
                  Robert Clarke and
                  Guoqiang Yu and
                  Jennifer E. Van Eyk and
                  David M. Herrington and
                  Yue Wang},
  title        = {swCAM: estimation of subtype-specific expressions in individual samples
                  with unsupervised sample-wise deconvolution},
  journal      = {Bioinform.},
  volume       = {38},
  number       = {5},
  pages        = {1403--1410},
  year         = {2022},
  url          = {https://doi.org/10.1093/bioinformatics/btab839},
  doi          = {10.1093/BIOINFORMATICS/BTAB839},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChenWLDLCYEHW22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/WangH21,
  author       = {Yue Wang and
                  David M. Herrington},
  title        = {Machine intelligence enabled radiomics},
  journal      = {Nat. Mach. Intell.},
  volume       = {3},
  number       = {10},
  pages        = {838--839},
  year         = {2021},
  url          = {https://doi.org/10.1038/s42256-021-00404-0},
  doi          = {10.1038/S42256-021-00404-0},
  timestamp    = {Tue, 21 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/natmi/WangH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangWRBWSLWWTY20,
  author       = {Yizhi Wang and
                  Congchao Wang and
                  Petter Ranefall and
                  Gerard Broussard and
                  Yinxue Wang and
                  Guilai Shi and
                  Boyu Lyu and
                  Chiung{-}Ting Wu and
                  Yue Wang and
                  Lin Tian and
                  Guoqiang Yu},
  title        = {SynQuant: an automatic tool to quantify synapses from microscopy images},
  journal      = {Bioinform.},
  volume       = {36},
  number       = {5},
  pages        = {1599--1606},
  year         = {2020},
  url          = {https://doi.org/10.1093/bioinformatics/btz760},
  doi          = {10.1093/BIOINFORMATICS/BTZ760},
  timestamp    = {Tue, 21 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WangWRBWSLWWTY20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WuWWEKGPHWY20,
  author       = {Chiung{-}Ting Wu and
                  Yizhi Wang and
                  Yinxue Wang and
                  Timothy M. D. Ebbels and
                  Ibrahim Karaman and
                  Gon{\c{c}}alo Gra{\c{c}}a and
                  Rui Pinto and
                  David M. Herrington and
                  Yue Wang and
                  Guoqiang Yu},
  title        = {Targeted realignment of {LC-MS} profiles by neighbor-wise compound-specific
                  graphical time warping with misalignment detection},
  journal      = {Bioinform.},
  volume       = {36},
  number       = {9},
  pages        = {2862--2871},
  year         = {2020},
  url          = {https://doi.org/10.1093/bioinformatics/btaa037},
  doi          = {10.1093/BIOINFORMATICS/BTAA037},
  timestamp    = {Tue, 21 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WuWWEKGPHWY20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenWWHCW20,
  author       = {Lulu Chen and
                  Chiung{-}Ting Wu and
                  Niya Wang and
                  David M. Herrington and
                  Robert Clarke and
                  Yue Wang},
  title        = {debCAM: a bioconductor {R} package for fully unsupervised deconvolution
                  of complex tissues},
  journal      = {Bioinform.},
  volume       = {36},
  number       = {12},
  pages        = {3927--3929},
  year         = {2020},
  url          = {https://doi.org/10.1093/bioinformatics/btaa205},
  doi          = {10.1093/BIOINFORMATICS/BTAA205},
  timestamp    = {Sun, 19 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChenWWHCW20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RuanLSWYY19,
  author       = {Jun Ruan and
                  Zhen Liu and
                  Ming Sun and
                  Yue Wang and
                  Junqiu Yue and
                  Guoqiang Yu},
  title        = {{DBS:} a fast and informative segmentation algorithm for {DNA} copy
                  number analysis},
  journal      = {{BMC} Bioinform.},
  volume       = {20},
  number       = {1},
  pages        = {1:1--1:14},
  year         = {2019},
  url          = {https://doi.org/10.1186/s12859-018-2565-8},
  doi          = {10.1186/S12859-018-2565-8},
  timestamp    = {Tue, 21 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/RuanLSWYY19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/WangZSLWFPC19,
  author       = {Heng Wang and
                  Donghao Zhang and
                  Yang Song and
                  Siqi Liu and
                  Yue Wang and
                  Dagan Feng and
                  Hanchuan Peng and
                  Weidong Cai},
  title        = {Segmenting Neuronal Structure in 3D Optical Microscope Images via
                  Knowledge Distillation with Teacher-Student Network},
  booktitle    = {16th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2019, Venice, Italy, April 8-11, 2019},
  pages        = {228--231},
  publisher    = {{IEEE}},
  year         = {2019},
  url          = {https://doi.org/10.1109/ISBI.2019.8759326},
  doi          = {10.1109/ISBI.2019.8759326},
  timestamp    = {Wed, 03 Dec 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/isbi/WangZSLWFPC19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamis/LinWMCW18,
  author       = {Chia{-}Hsiang Lin and
                  Ruiyuan Wu and
                  Wing{-}Kin Ma and
                  Chong{-}Yung Chi and
                  Yue Wang},
  title        = {Maximum Volume Inscribed Ellipsoid: {A} New Simplex-Structured Matrix
                  Factorization Framework via Facet Enumeration and Convex Optimization},
  journal      = {{SIAM} J. Imaging Sci.},
  volume       = {11},
  number       = {2},
  pages        = {1651--1679},
  year         = {2018},
  url          = {https://doi.org/10.1137/17M114145X},
  doi          = {10.1137/17M114145X},
  timestamp    = {Sun, 19 Jan 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/siamis/LinWMCW18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/TareefSHFCWC18,
  author       = {Afaf Tareef and
                  Yang Song and
                  Heng Huang and
                  Dagan Feng and
                  Mei Chen and
                  Yue Wang and
                  Weidong Cai},
  title        = {Multi-Pass Fast Watershed for Accurate Segmentation of Overlapping
                  Cervical Cells},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {37},
  number       = {9},
  pages        = {2044--2059},
  year         = {2018},
  url          = {https://doi.org/10.1109/TMI.2018.2815013},
  doi          = {10.1109/TMI.2018.2815013},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tmi/TareefSHFCWC18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tnn/LinCCMW18,
  author       = {Chia{-}Hsiang Lin and
                  Chong{-}Yung Chi and
                  Lulu Chen and
                  David J. Miller and
                  Yue Wang},
  title        = {Detection of Sources in Non-Negative Blind Source Separation by Minimum
                  Description Length Criterion},
  journal      = {{IEEE} Trans. Neural Networks Learn. Syst.},
  volume       = {29},
  number       = {9},
  pages        = {4022--4037},
  year         = {2018},
  url          = {https://doi.org/10.1109/TNNLS.2017.2749279},
  doi          = {10.1109/TNNLS.2017.2749279},
  timestamp    = {Sun, 19 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tnn/LinCCMW18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/Zhang0LFWC18,
  author       = {Donghao Zhang and
                  Yang Song and
                  Siqi Liu and
                  Dagan Feng and
                  Yue Wang and
                  Weidong Cai},
  title        = {Nuclei instance segmentation with dual contour-enhanced adversarial
                  network},
  booktitle    = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2018, Washington, DC, USA, April 4-7, 2018},
  pages        = {409--412},
  publisher    = {{IEEE}},
  year         = {2018},
  url          = {https://doi.org/10.1109/ISBI.2018.8363604},
  doi          = {10.1109/ISBI.2018.8363604},
  timestamp    = {Wed, 03 Dec 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/isbi/Zhang0LFWC18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/WangAWKY18,
  author       = {Yinxue Wang and
                  Maria Ali and
                  Yue Joseph Wang and
                  Sarah Kucenas and
                  Guoqiang Yu},
  title        = {Detection and tracking of migrating oligodendrocyte progenitor cells
                  from in vivo fluorescence time-lapse imaging data},
  booktitle    = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2018, Washington, DC, USA, April 4-7, 2018},
  pages        = {961--964},
  publisher    = {{IEEE}},
  year         = {2018},
  url          = {https://doi.org/10.1109/ISBI.2018.8363730},
  doi          = {10.1109/ISBI.2018.8363730},
  timestamp    = {Tue, 05 Aug 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/WangAWKY18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/WangSMWWBWTY17,
  author       = {Yinxue Wang and
                  Guilai Shi and
                  David J. Miller and
                  Yizhi Wang and
                  Congchao Wang and
                  Gerard Broussard and
                  Yue Wang and
                  Lin Tian and
                  Guoqiang Yu},
  title        = {Automated Functional Analysis of Astrocytes from Chronic Time-Lapse
                  Calcium Imaging Data},
  journal      = {Frontiers Neuroinformatics},
  volume       = {11},
  pages        = {48},
  year         = {2017},
  url          = {https://doi.org/10.3389/fninf.2017.00048},
  doi          = {10.3389/FNINF.2017.00048},
  timestamp    = {Sun, 19 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/fini/WangSMWWBWTY17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/TareefSCHCWFFC17,
  author       = {Afaf Tareef and
                  Yang Song and
                  Weidong Cai and
                  Heng Huang and
                  Hang Chang and
                  Yue Wang and
                  Michael J. Fulham and
                  Dagan Feng and
                  Mei Chen},
  title        = {Automatic segmentation of overlapping cervical smear cells based on
                  local distinctive features and guided shape deformation},
  journal      = {Neurocomputing},
  volume       = {221},
  pages        = {94--107},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.neucom.2016.09.070},
  doi          = {10.1016/J.NEUCOM.2016.09.070},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijon/TareefSCHCWFFC17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/TareefSHWFCC17,
  author       = {Afaf Tareef and
                  Yang Song and
                  Heng Huang and
                  Yue Wang and
                  Dagan Feng and
                  Mei Chen and
                  Weidong Cai},
  title        = {Optimizing the cervix cytological examination based on deep learning
                  and dynamic shape modeling},
  journal      = {Neurocomputing},
  volume       = {248},
  pages        = {28--40},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.neucom.2017.01.093},
  doi          = {10.1016/J.NEUCOM.2017.01.093},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijon/TareefSHWFCC17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/SongLZHFWCC17,
  author       = {Yang Song and
                  Qing Li and
                  Fan Zhang and
                  Heng Huang and
                  Dagan Feng and
                  Yue Wang and
                  Mei Chen and
                  Weidong Cai},
  title        = {Dual discriminative local coding for tissue aging analysis},
  journal      = {Medical Image Anal.},
  volume       = {38},
  pages        = {65--76},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.media.2016.10.001},
  doi          = {10.1016/J.MEDIA.2016.10.001},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/SongLZHFWCC17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SongCHFWC16,
  author       = {Yang Song and
                  Weidong Cai and
                  Heng Huang and
                  Dagan Feng and
                  Yue Wang and
                  Mei Chen},
  title        = {Bioimage classification with subcategory discriminant transform of
                  high dimensional visual descriptors},
  journal      = {{BMC} Bioinform.},
  volume       = {17},
  pages        = {465:1--465:15},
  year         = {2016},
  url          = {https://doi.org/10.1186/s12859-016-1318-9},
  doi          = {10.1186/S12859-016-1318-9},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/SongCHFWC16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/YoussefCSWY16,
  author       = {Ibrahim Youssef and
                  Robert Clarke and
                  Ie{-}Ming Shih and
                  Yue Joseph Wang and
                  Guoqiang Yu},
  title        = {Biologically inspired survival analysis based on integrating gene
                  expression as mediator with genomic variants},
  journal      = {Comput. Biol. Medicine},
  volume       = {77},
  pages        = {231--239},
  year         = {2016},
  url          = {https://doi.org/10.1016/j.compbiomed.2016.08.020},
  doi          = {10.1016/J.COMPBIOMED.2016.08.020},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cbm/YoussefCSWY16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tbe/AmbikapathiCLYC16,
  author       = {Arul{-}Murugan Ambikapathi and
                  Tsung{-}Han Chan and
                  Chia{-}Hsiang Lin and
                  Fei{-}Shih Yang and
                  Chong{-}Yung Chi and
                  Yue Wang},
  title        = {Convex-Optimization-Based Compartmental Pharmacokinetic Analysis for
                  Prostate Tumor Characterization Using {DCE-MRI}},
  journal      = {{IEEE} Trans. Biomed. Eng.},
  volume       = {63},
  number       = {4},
  pages        = {707--720},
  year         = {2016},
  url          = {https://doi.org/10.1109/TBME.2015.2469601},
  doi          = {10.1109/TBME.2015.2469601},
  timestamp    = {Sun, 19 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tbe/AmbikapathiCLYC16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/WangS0WBWTY16,
  author       = {Yinxue Wang and
                  Guilai Shi and
                  David J. Miller and
                  Yizhi Wang and
                  Gerard Broussard and
                  Yue Wang and
                  Lin Tian and
                  Guoqiang Yu},
  title        = {{FASP:} {A} machine learning approach to functional astrocyte phenotyping
                  from time-lapse calcium imaging data},
  booktitle    = {13th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2016, Prague, Czech Republic, April 13-16, 2016},
  pages        = {351--354},
  publisher    = {{IEEE}},
  year         = {2016},
  url          = {https://doi.org/10.1109/ISBI.2016.7493281},
  doi          = {10.1109/ISBI.2016.7493281},
  timestamp    = {Sun, 19 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/WangS0WBWTY16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/TareefSCWFC16,
  author       = {Afaf Tareef and
                  Yang Song and
                  Tom Weidong Cai and
                  Yue Wang and
                  David Dagan Feng and
                  Mei Chen},
  title        = {Automatic nuclei and cytoplasm segmentation of leukocytes with color
                  and texture-based image enhancement},
  booktitle    = {13th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2016, Prague, Czech Republic, April 13-16, 2016},
  pages        = {935--938},
  publisher    = {{IEEE}},
  year         = {2016},
  url          = {https://doi.org/10.1109/ISBI.2016.7493418},
  doi          = {10.1109/ISBI.2016.7493418},
  timestamp    = {Tue, 07 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/TareefSCWFC16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/SongCZHFWC16,
  author       = {Yang Song and
                  Weidong Cai and
                  Fan Zhang and
                  Heng Huang and
                  David Dagan Feng and
                  Yue Wang and
                  Mei Chen},
  title        = {Texture analysis of tissue aging using global and cluster constrained
                  local coding},
  booktitle    = {13th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2016, Prague, Czech Republic, April 13-16, 2016},
  pages        = {1229--1232},
  publisher    = {{IEEE}},
  year         = {2016},
  url          = {https://doi.org/10.1109/ISBI.2016.7493488},
  doi          = {10.1109/ISBI.2016.7493488},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/isbi/SongCZHFWC16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nips/Wang0PWTY16,
  author       = {Yizhi Wang and
                  David J. Miller and
                  Kira Poskanzer and
                  Yue Wang and
                  Lin Tian and
                  Guoqiang Yu},
  editor       = {Daniel D. Lee and
                  Masashi Sugiyama and
                  Ulrike von Luxburg and
                  Isabelle Guyon and
                  Roman Garnett},
  title        = {Graphical Time Warping for Joint Alignment of Multiple Curves},
  booktitle    = {Advances in Neural Information Processing Systems 29: Annual Conference
                  on Neural Information Processing Systems 2016, December 5-10, 2016,
                  Barcelona, Spain},
  pages        = {3648--3656},
  year         = {2016},
  url          = {https://proceedings.neurips.cc/paper/2016/hash/f0bbac6fa079f1e00b2c14c1d3c6ccf0-Abstract.html},
  timestamp    = {Sun, 19 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/nips/Wang0PWTY16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangGCCSZLXW15,
  author       = {Niya Wang and
                  Ting Gong and
                  Robert Clarke and
                  Lulu Chen and
                  Ie{-}Ming Shih and
                  Zhen Zhang and
                  Douglas A. Levine and
                  Jianhua Xuan and
                  Yue Joseph Wang},
  title        = {{UNDO:} a Bioconductor {R} package for unsupervised deconvolution
                  of mixed gene expressions in tumor samples},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {1},
  pages        = {137--139},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btu607},
  doi          = {10.1093/BIOINFORMATICS/BTU607},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WangGCCSZLXW15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TianZHCZSXHW15,
  author       = {Ye Tian and
                  Bai Zhang and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Zhen Zhang and
                  Ie{-}Ming Shih and
                  Jianhua Xuan and
                  David M. Herrington and
                  Yue Joseph Wang},
  title        = {{KDDN:} an open-source Cytoscape app for constructing differential
                  dependency networks with significant rewiring},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {2},
  pages        = {287--289},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btu632},
  doi          = {10.1093/BIOINFORMATICS/BTU632},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/TianZHCZSXHW15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShiBCSHCWX15,
  author       = {Xu Shi and
                  Robert O. Barnes and
                  Li Chen and
                  Ayesha N. Shajahan{-}Haq and
                  Leena Hilakivi{-}Clarke and
                  Robert Clarke and
                  Yue Joseph Wang and
                  Jianhua Xuan},
  title        = {BMRF-Net: a software tool for identification of protein interaction
                  subnetworks by a bagging Markov random field-based method},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {14},
  pages        = {2412--2414},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btv137},
  doi          = {10.1093/BIOINFORMATICS/BTV137},
  timestamp    = {Mon, 17 Nov 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ShiBCSHCWX15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RanjbarPWR15,
  author       = {Mohammad R. Nezami Ranjbar and
                  Cristina Di Poto and
                  Yue Joseph Wang and
                  Habtom W. Ressom},
  title        = {{SIMAT:} {GC-SIM-MS} data analysis tool},
  journal      = {{BMC} Bioinform.},
  volume       = {16},
  pages        = {259:1--259:12},
  year         = {2015},
  url          = {https://doi.org/10.1186/s12859-015-0681-2},
  doi          = {10.1186/S12859-015-0681-2},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/RanjbarPWR15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/SongCHZWF15,
  author       = {Yang Song and
                  Tom Weidong Cai and
                  Heng Huang and
                  Yun Zhou and
                  Yue Wang and
                  David Dagan Feng},
  title        = {Locality-constrained Subcluster Representation Ensemble for lung image
                  classification},
  journal      = {Medical Image Anal.},
  volume       = {22},
  number       = {1},
  pages        = {102--113},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.media.2015.03.003},
  doi          = {10.1016/J.MEDIA.2015.03.003},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/SongCHZWF15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/RanjbarTWR15,
  author       = {Mohammad R. Nezami Ranjbar and
                  Mahlet G. Tadesse and
                  Yue Joseph Wang and
                  Habtom W. Ressom},
  title        = {Bayesian Normalization Model for Label-Free Quantitative Analysis
                  by {LC-MS}},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {12},
  number       = {4},
  pages        = {914--927},
  year         = {2015},
  url          = {https://doi.org/10.1109/TCBB.2014.2377723},
  doi          = {10.1109/TCBB.2014.2377723},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/RanjbarTWR15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/SongCHZFWFC15,
  author       = {Yang Song and
                  Tom Weidong Cai and
                  Heng Huang and
                  Yun Zhou and
                  David Dagan Feng and
                  Yue Wang and
                  Michael J. Fulham and
                  Mei Chen},
  title        = {Large Margin Local Estimate With Applications to Medical Image Classification},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {34},
  number       = {6},
  pages        = {1362--1377},
  year         = {2015},
  url          = {https://doi.org/10.1109/TMI.2015.2393954},
  doi          = {10.1109/TMI.2015.2393954},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tmi/SongCHZFWFC15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iconip/TareefSCHWFC15,
  author       = {Afaf Tareef and
                  Yang Song and
                  Weidong Cai and
                  Heng Huang and
                  Yue Wang and
                  Dagan Feng and
                  Mei Chen},
  editor       = {Sabri Arik and
                  Tingwen Huang and
                  Weng Kin Lai and
                  Qingshan Liu},
  title        = {Learning Shape-Driven Segmentation Based on Neural Network and Sparse
                  Reconstruction Toward Automated Cell Analysis of Cervical Smears},
  booktitle    = {Neural Information Processing - 22nd International Conference, {ICONIP}
                  2015, Istanbul, Turkey, November 9-12, 2015, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  pages        = {390--400},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-26532-2\_43},
  doi          = {10.1007/978-3-319-26532-2\_43},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/iconip/TareefSCHWFC15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangHYSZCWFMWY14,
  author       = {Bai Zhang and
                  Xuchu Hou and
                  Xiguo Yuan and
                  Ie{-}Ming Shih and
                  Zhen Zhang and
                  Robert Clarke and
                  Roger R. Wang and
                  Yi Fu and
                  Subha Madhavan and
                  Yue Joseph Wang and
                  Guoqiang Yu},
  title        = {{AISAIC:} a software suite for accurate identification of significant
                  aberrations in cancers},
  journal      = {Bioinform.},
  volume       = {30},
  number       = {3},
  pages        = {431--433},
  year         = {2014},
  url          = {https://doi.org/10.1093/bioinformatics/btt693},
  doi          = {10.1093/BIOINFORMATICS/BTT693},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ZhangHYSZCWFMWY14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GuXRCWC14,
  author       = {Jinghua Gu and
                  Jianhua Xuan and
                  Rebecca B. Riggins and
                  Li Chen and
                  Yue Joseph Wang and
                  Robert Clarke},
  title        = {Robust identification of transcriptional regulatory networks using
                  a Gibbs sampler on outlier sum statistic},
  journal      = {Bioinform.},
  volume       = {30},
  number       = {15},
  pages        = {2242},
  year         = {2014},
  url          = {https://doi.org/10.1093/bioinformatics/btu188},
  doi          = {10.1093/BIOINFORMATICS/BTU188},
  timestamp    = {Fri, 27 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GuXRCWC14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/TianZHCZSXHW14,
  author       = {Ye Tian and
                  Bai Zhang and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Zhen Zhang and
                  Ie{-}Ming Shih and
                  Jianhua Xuan and
                  David M. Herrington and
                  Yue Joseph Wang},
  title        = {Knowledge-fused differential dependency network models for detecting
                  significant rewiring in biological networks},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  pages        = {87},
  year         = {2014},
  url          = {https://doi.org/10.1186/s12918-014-0087-1},
  doi          = {10.1186/S12918-014-0087-1},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/TianZHCZSXHW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/TianWZRPSCAYYCWZWA14,
  author       = {Ye Tian and
                  Sean S. Wang and
                  Zhen Zhang and
                  Olga C. Rodriguez and
                  Emanuel Petricoin III and
                  Ie{-}Ming Shih and
                  Daniel Chan and
                  Maria Avantaggiati and
                  Guoqiang Yu and
                  Shaozhen Ye and
                  Robert Clarke and
                  Chao Wang and
                  Bai Zhang and
                  Yue Joseph Wang and
                  Chris Albanese},
  title        = {Integration of Network Biology and Imaging to Study Cancer Phenotypes
                  and Responses},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {11},
  number       = {6},
  pages        = {1009--1019},
  year         = {2014},
  url          = {https://doi.org/10.1109/TCBB.2014.2338304},
  doi          = {10.1109/TCBB.2014.2338304},
  timestamp    = {Wed, 25 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcbb/TianWZRPSCAYYCWZWA14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/IbrahimYCW14,
  author       = {Ibrahim Mohamed Ibrahim and
                  Guoqiang Yu and
                  Li Chen and
                  Yue Wang},
  title        = {Enhancing the convex analysis of mixtures technique for estimating
                  {DCE-MRI} pharmacokinetic parameters},
  booktitle    = {36th Annual International Conference of the {IEEE} Engineering in
                  Medicine and Biology Society, {EMBC} 2014, Chicago, IL, USA, August
                  26-30, 2014},
  pages        = {6434--6437},
  publisher    = {{IEEE}},
  year         = {2014},
  url          = {https://doi.org/10.1109/EMBC.2014.6945101},
  doi          = {10.1109/EMBC.2014.6945101},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/embc/IbrahimYCW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/globalsip/WangBWMHY14,
  author       = {Yinxue Wang and
                  Luca Bello and
                  Yue Wang and
                  Craig M. McDonald and
                  Eric P. Hoffman and
                  Guoqiang Yu},
  title        = {Predicting age at loss of ambulation in Duchenne muscular dystrophy
                  with deep phenotypic measures},
  booktitle    = {2014 {IEEE} Global Conference on Signal and Information Processing,
                  GlobalSIP 2014, Atlanta, GA, USA, December 3-5, 2014},
  pages        = {1344--1347},
  publisher    = {{IEEE}},
  year         = {2014},
  url          = {https://doi.org/10.1109/GlobalSIP.2014.7032343},
  doi          = {10.1109/GLOBALSIP.2014.7032343},
  timestamp    = {Tue, 21 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/globalsip/WangBWMHY14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/globalsip/YuWWWW14,
  author       = {Guoqiang Yu and
                  Niya Wang and
                  Roger R. Wang and
                  Sean S. Wang and
                  Yue Wang},
  title        = {A feasible roadmap to identifying significant intercellular genomic
                  heterogeneity in deep sequencing data},
  booktitle    = {2014 {IEEE} Global Conference on Signal and Information Processing,
                  GlobalSIP 2014, Atlanta, GA, USA, December 3-5, 2014},
  pages        = {1364--1367},
  publisher    = {{IEEE}},
  year         = {2014},
  url          = {https://doi.org/10.1109/GlobalSIP.2014.7032348},
  doi          = {10.1109/GLOBALSIP.2014.7032348},
  timestamp    = {Tue, 21 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/globalsip/YuWWWW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/globalsip/TianZFYW14,
  author       = {Ye Tian and
                  Bai Zhang and
                  Yi Fu and
                  Guoqiang Yu and
                  Yue Wang},
  title        = {A statistical approach to identifying significant transgenerational
                  methylation changes},
  booktitle    = {2014 {IEEE} Global Conference on Signal and Information Processing,
                  GlobalSIP 2014, Atlanta, GA, USA, December 3-5, 2014},
  pages        = {1394--1397},
  publisher    = {{IEEE}},
  year         = {2014},
  url          = {https://doi.org/10.1109/GlobalSIP.2014.7032356},
  doi          = {10.1109/GLOBALSIP.2014.7032356},
  timestamp    = {Tue, 21 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/globalsip/TianZFYW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icassp/WanMZWK14,
  author       = {Shibiao Wan and
                  Man{-}Wai Mak and
                  Bai Zhang and
                  Yue Joseph Wang and
                  Sun{-}Yuan Kung},
  title        = {Ensemble random projection for multi-label classification with application
                  to protein subcellular localization},
  booktitle    = {{IEEE} International Conference on Acoustics, Speech and Signal Processing,
                  {ICASSP} 2014, Florence, Italy, May 4-9, 2014},
  pages        = {5999--6003},
  publisher    = {{IEEE}},
  year         = {2014},
  url          = {https://doi.org/10.1109/ICASSP.2014.6854755},
  doi          = {10.1109/ICASSP.2014.6854755},
  timestamp    = {Wed, 25 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icassp/WanMZWK14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/ZhaoXW14,
  author       = {Liang Zhao and
                  Jianhua Xuan and
                  Yue Wang},
  title        = {A feasible roadmap for developing volumetric probability atlas of
                  localized prostate cancer},
  journal      = {CoRR},
  volume       = {abs/1409.4139},
  year         = {2014},
  url          = {http://arxiv.org/abs/1409.4139},
  eprinttype   = {arXiv},
  eprint       = {1409.4139},
  timestamp    = {Mon, 06 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/ZhaoXW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TsaiTPPMWR13,
  author       = {Tsung{-}Heng Tsai and
                  Mahlet G. Tadesse and
                  Cristina Di Poto and
                  Lewis K. Pannell and
                  Yehia Mechref and
                  Yue Joseph Wang and
                  Habtom W. Ressom},
  title        = {Multi-profile Bayesian alignment model for {LC-MS} data analysis with
                  integration of internal standards},
  journal      = {Bioinform.},
  volume       = {29},
  number       = {21},
  pages        = {2774--2780},
  year         = {2013},
  url          = {https://doi.org/10.1093/bioinformatics/btt461},
  doi          = {10.1093/BIOINFORMATICS/BTT461},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/TsaiTPPMWR13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SongCHWFC13,
  author       = {Yang Song and
                  Weidong Cai and
                  Heng Huang and
                  Yue Wang and
                  David Dagan Feng and
                  Mei Chen},
  title        = {Region-based progressive localization of cell nuclei in microscopic
                  images with data adaptive modeling},
  journal      = {{BMC} Bioinform.},
  volume       = {14},
  pages        = {173},
  year         = {2013},
  url          = {https://doi.org/10.1186/1471-2105-14-173},
  doi          = {10.1186/1471-2105-14-173},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/SongCHWFC13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jmlr/WangMCMCHXW13,
  author       = {Niya Wang and
                  Fan Meng and
                  Li Chen and
                  Subha Madhavan and
                  Robert Clarke and
                  Eric P. Hoffman and
                  Jianhua Xuan and
                  Yue Joseph Wang},
  title        = {The {CAM} software for nonnegative blind source separation in R-Java},
  journal      = {J. Mach. Learn. Res.},
  volume       = {14},
  number       = {1},
  pages        = {2899--2903},
  year         = {2013},
  url          = {https://dl.acm.org/doi/10.5555/2567709.2567753},
  doi          = {10.5555/2567709.2567753},
  timestamp    = {Thu, 02 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jmlr/WangMCMCHXW13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/TsaiTWR13,
  author       = {Tsung{-}Heng Tsai and
                  Mahlet G. Tadesse and
                  Yue Joseph Wang and
                  Habtom W. Ressom},
  title        = {Profile-Based {LC-MS} Data Alignment-A Bayesian Approach},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {10},
  number       = {2},
  pages        = {494--503},
  year         = {2013},
  url          = {https://doi.org/10.1109/TCBB.2013.25},
  doi          = {10.1109/TCBB.2013.25},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/TsaiTWR13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/WanMZWK13,
  author       = {Shibiao Wan and
                  Man{-}Wai Mak and
                  Bai Zhang and
                  Yue Joseph Wang and
                  Sun{-}Yuan Kung},
  editor       = {Guo{-}Zheng Li and
                  Sunghoon Kim and
                  Michael Hughes and
                  Geoffrey J. McLachlan and
                  Hongye Sun and
                  Xiaohua Hu and
                  Habtom W. Ressom and
                  Baoyan Liu and
                  Michael N. Liebman},
  title        = {An ensemble classifier with random projection for predicting multi-label
                  protein subcellular localization},
  booktitle    = {2013 {IEEE} International Conference on Bioinformatics and Biomedicine,
                  Shanghai, China, December 18-21, 2013},
  pages        = {35--42},
  publisher    = {{IEEE} Computer Society},
  year         = {2013},
  url          = {https://doi.org/10.1109/BIBM.2013.6732715},
  doi          = {10.1109/BIBM.2013.6732715},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/WanMZWK13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GuXRCWC12,
  author       = {Jinghua Gu and
                  Jianhua Xuan and
                  Rebecca B. Riggins and
                  Li Chen and
                  Yue Joseph Wang and
                  Robert Clarke},
  title        = {Robust identification of transcriptional regulatory networks using
                  a Gibbs sampler on outlier sum statistic},
  journal      = {Bioinform.},
  volume       = {28},
  number       = {15},
  pages        = {1990--1997},
  year         = {2012},
  url          = {https://doi.org/10.1093/bioinformatics/bts296},
  doi          = {10.1093/BIOINFORMATICS/BTS296},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GuXRCWC12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/WangHXWH12,
  author       = {Chen Wang and
                  Sook Shin Ha and
                  Jianhua Xuan and
                  Yue Joseph Wang and
                  Eric P. Hoffman},
  title        = {Computational analysis of muscular dystrophy sub-types using a novel
                  integrative scheme},
  journal      = {Neurocomputing},
  volume       = {92},
  pages        = {9--17},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.neucom.2011.08.037},
  doi          = {10.1016/J.NEUCOM.2011.08.037},
  timestamp    = {Mon, 30 Dec 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijon/WangHXWH12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Yuan0ZHW12,
  author       = {Xiguo Yuan and
                  David J. Miller and
                  Junying Zhang and
                  David M. Herrington and
                  Yue Wang},
  title        = {An Overview of Population Genetic Data Simulation},
  journal      = {J. Comput. Biol.},
  volume       = {19},
  number       = {1},
  pages        = {42--54},
  year         = {2012},
  url          = {https://doi.org/10.1089/cmb.2010.0188},
  doi          = {10.1089/CMB.2010.0188},
  timestamp    = {Sun, 19 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/Yuan0ZHW12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sigpro/WangXSCW12,
  author       = {Chen Wang and
                  Jianhua Xuan and
                  Ie{-}Ming Shih and
                  Robert Clarke and
                  Yue Joseph Wang},
  title        = {Regulatory component analysis: {A} semi-blind extraction approach
                  to infer gene regulatory networks with imperfect biological knowledge},
  journal      = {Signal Process.},
  volume       = {92},
  number       = {8},
  pages        = {1902--1915},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.sigpro.2011.11.028},
  doi          = {10.1016/J.SIGPRO.2011.11.028},
  timestamp    = {Sat, 22 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/sigpro/WangXSCW12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tnn/ZhangMW12,
  author       = {Bai Zhang and
                  David J. Miller and
                  Yue Joseph Wang},
  title        = {Nonlinear System Modeling With Random Matrices: Echo State Networks
                  Revisited},
  journal      = {{IEEE} Trans. Neural Networks Learn. Syst.},
  volume       = {23},
  number       = {1},
  pages        = {175--182},
  year         = {2012},
  url          = {https://doi.org/10.1109/TNNLS.2011.2178562},
  doi          = {10.1109/TNNLS.2011.2178562},
  timestamp    = {Mon, 09 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tnn/ZhangMW12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/RanjbarZTWR12,
  author       = {Mohammad R. Nezami Ranjbar and
                  Yi Zhao and
                  Mahlet G. Tadesse and
                  Yue Joseph Wang and
                  Habtom W. Ressom},
  title        = {Evaluation of normalization methods for analysis of {LC-MS} data},
  booktitle    = {2012 {IEEE} International Conference on Bioinformatics and Biomedicine
                  Workshops, {BIBMW} 2012, Philadelphia, USA, October 4-7, 2012},
  pages        = {610--617},
  publisher    = {{IEEE} Computer Society},
  year         = {2012},
  url          = {https://doi.org/10.1109/BIBMW.2012.6470209},
  doi          = {10.1109/BIBMW.2012.6470209},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/RanjbarZTWR12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/SongCHWF12,
  author       = {Yang Song and
                  Weidong Cai and
                  Heng Huang and
                  Yue Wang and
                  David Dagan Feng},
  title        = {Object localization in medical images based on graphical model with
                  contrast and interest-region terms},
  booktitle    = {2012 {IEEE} Computer Society Conference on Computer Vision and Pattern
                  Recognition Workshops, Providence, RI, USA, June 16-21, 2012},
  pages        = {1--7},
  publisher    = {{IEEE} Computer Society},
  year         = {2012},
  url          = {https://doi.org/10.1109/CVPRW.2012.6239240},
  doi          = {10.1109/CVPRW.2012.6239240},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cvpr/SongCHWF12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gensips/RanjbarTWR12,
  author       = {Mohammad R. Nezami Ranjbar and
                  Mahlet G. Tadesse and
                  Yue Joseph Wang and
                  Habtom W. Ressom},
  title        = {Normalization of {LC-MS} data using Gaussian process},
  booktitle    = {Proceedings 2012 {IEEE} International Workshop on Genomic Signal Processing
                  and Statistics, GENSiPS 2012, Washington, DC, USA, December 2-4, 2012},
  pages        = {187--190},
  publisher    = {{IEEE}},
  year         = {2012},
  url          = {https://doi.org/10.1109/GENSIPS.2012.6507760},
  doi          = {10.1109/GENSIPS.2012.6507760},
  timestamp    = {Wed, 16 Oct 2019 14:14:54 +0200},
  biburl       = {https://dblp.org/rec/conf/gensips/RanjbarTWR12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/SongCWF12,
  author       = {Yang Song and
                  Weidong Cai and
                  Yue Wang and
                  David Dagan Feng},
  title        = {Location classification of lung nodules with optimized graph construction},
  booktitle    = {9th {IEEE} International Symposium on Biomedical Imaging: From Nano
                  to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings},
  pages        = {1439--1442},
  publisher    = {{IEEE}},
  year         = {2012},
  url          = {https://doi.org/10.1109/ISBI.2012.6235841},
  doi          = {10.1109/ISBI.2012.6235841},
  timestamp    = {Tue, 07 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/SongCWF12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/SongCHWF12,
  author       = {Yang Song and
                  Weidong Cai and
                  Heng Huang and
                  Yue Wang and
                  David Dagan Feng},
  editor       = {Bjoern H. Menze and
                  Georg Langs and
                  Le Lu and
                  Albert Montillo and
                  Zhuowen Tu and
                  Antonio Criminisi},
  title        = {Context Enhanced Graphical Model for Object Localization in Medical
                  Images},
  booktitle    = {Medical Computer Vision. Recognition Techniques and Applications in
                  Medical Imaging - Second International {MICCAI} Workshop, {MCV} 2012,
                  Nice, France, October 5, 2012, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  pages        = {194--205},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-36620-8\_19},
  doi          = {10.1007/978-3-642-36620-8\_19},
  timestamp    = {Thu, 19 Feb 2026 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/SongCHWF12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/ChenXGWCZWS12,
  author       = {Li Chen and
                  Jianhua Xuan and
                  Jinghua Gu and
                  Yue Wang and
                  Zhen Zhang and
                  Tian{-}Li Wang and
                  Ie{-}Ming Shih},
  editor       = {Russ B. Altman and
                  A. Keith Dunker and
                  Lawrence Hunter and
                  Tiffany Murray and
                  Teri E. Klein},
  title        = {Integrative Network Analysis to Identify Aberrant Pathway Networks
                  in Ovarian Cancer},
  booktitle    = {Biocomputing 2012: Proceedings of the Pacific Symposium, Kohala Coast,
                  Hawaii, USA, January 3-7, 2012},
  pages        = {31--42},
  publisher    = {World Scientific Publishing},
  year         = {2012},
  url          = {http://psb.stanford.edu/psb-online/proceedings/psb12/chen.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/psb/ChenXGWCZWS12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/waim/ZhuYWW12,
  author       = {Huaijie Zhu and
                  Xiaochun Yang and
                  Bin Wang and
                  Yue Joseph Wang},
  editor       = {Zhifeng Bao and
                  Yunjun Gao and
                  Yu Gu and
                  Longjiang Guo and
                  Yingshu Li and
                  Jiaheng Lu and
                  Zujie Ren and
                  Chaokun Wang and
                  Xiao Zhang},
  title        = {Improving Text Search on Hybrid Data},
  booktitle    = {Web-Age Information Management - {WAIM} 2012 International Workshops:
                  GDMM, IWSN, MDSP, USDM, and {XMLDM} Harbin, China, August 18-20, 2012
                  Proceedings},
  series       = {Lecture Notes in Computer Science},
  pages        = {192--203},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-33050-6\_20},
  doi          = {10.1007/978-3-642-33050-6\_20},
  timestamp    = {Thu, 02 Oct 2025 08:29:55 +0200},
  biburl       = {https://dblp.org/rec/conf/waim/ZhuYWW12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1203-3532,
  author       = {Bai Zhang and
                  Yue Joseph Wang},
  title        = {Learning Structural Changes of Gaussian Graphical Models in Controlled
                  Experiments},
  journal      = {CoRR},
  volume       = {abs/1203.3532},
  year         = {2012},
  url          = {http://arxiv.org/abs/1203.3532},
  eprinttype   = {arXiv},
  eprint       = {1203.3532},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1203-3532.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuLHSCHMXW11,
  author       = {Guoqiang Yu and
                  Huai Li and
                  Sook Shin Ha and
                  Ie{-}Ming Shih and
                  Robert Clarke and
                  Eric P. Hoffman and
                  Subha Madhavan and
                  Jianhua Xuan and
                  Yue Joseph Wang},
  title        = {{PUGSVM:} a caBIG\({}^{\mbox{TM}}\) analytical tool for multiclass
                  gene selection and predictive classification},
  journal      = {Bioinform.},
  volume       = {27},
  number       = {5},
  pages        = {736--738},
  year         = {2011},
  url          = {https://doi.org/10.1093/bioinformatics/btq721},
  doi          = {10.1093/BIOINFORMATICS/BTQ721},
  timestamp    = {Mon, 30 Dec 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/YuLHSCHMXW11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangTJLSMCHXHW11,
  author       = {Bai Zhang and
                  Ye Tian and
                  Lu Jin and
                  Huai Li and
                  Ie{-}Ming Shih and
                  Subha Madhavan and
                  Robert Clarke and
                  Eric P. Hoffman and
                  Jianhua Xuan and
                  Leena Hilakivi{-}Clarke and
                  Yue Joseph Wang},
  title        = {{DDN:} a caBIG\({}^{\mbox{{\textregistered}}}\) analytical tool for
                  differential network analysis},
  journal      = {Bioinform.},
  volume       = {27},
  number       = {7},
  pages        = {1036--1038},
  year         = {2011},
  url          = {https://doi.org/10.1093/bioinformatics/btr052},
  doi          = {10.1093/BIOINFORMATICS/BTR052},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ZhangTJLSMCHXHW11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuZBXSW11,
  author       = {Guoqiang Yu and
                  Bai Zhang and
                  G. Steven Bova and
                  Jianfeng Xu and
                  Ie{-}Ming Shih and
                  Yue Joseph Wang},
  title        = {{BACOM:} \emph{in silico} detection of genomic deletion types and
                  correction of normal cell contamination in copy number data},
  journal      = {Bioinform.},
  volume       = {27},
  number       = {11},
  pages        = {1473--1480},
  year         = {2011},
  url          = {https://doi.org/10.1093/bioinformatics/btr183},
  doi          = {10.1093/BIOINFORMATICS/BTR183},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/YuZBXSW11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenCCHCBWWSW11,
  author       = {Li Chen and
                  Tsung{-}Han Chan and
                  Peter L. Choyke and
                  Elizabeth M. C. Hillman and
                  Chong{-}Yung Chi and
                  Zaver M. Bhujwalla and
                  Ge Wang and
                  Sean S. Wang and
                  Zsolt Szabo and
                  Yue Joseph Wang},
  title        = {{CAM-CM:} a signal deconvolution tool for \emph{in vivo} dynamic contrast-enhanced
                  imaging of complex tissues},
  journal      = {Bioinform.},
  volume       = {27},
  number       = {18},
  pages        = {2607--2609},
  year         = {2011},
  url          = {https://doi.org/10.1093/bioinformatics/btr436},
  doi          = {10.1093/BIOINFORMATICS/BTR436},
  timestamp    = {Wed, 17 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChenCCHCBWWSW11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GongXCRLHCW11,
  author       = {Ting Gong and
                  Jianhua Xuan and
                  Li Chen and
                  Rebecca B. Riggins and
                  Huai Li and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Yue Joseph Wang},
  title        = {Motif-guided sparse decomposition of gene expression data for regulatory
                  module identification},
  journal      = {{BMC} Bioinform.},
  volume       = {12},
  pages        = {82},
  year         = {2011},
  url          = {https://doi.org/10.1186/1471-2105-12-82},
  doi          = {10.1186/1471-2105-12-82},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/GongXCRLHCW11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChenXRCW11,
  author       = {Li Chen and
                  Jianhua Xuan and
                  Rebecca B. Riggins and
                  Robert Clarke and
                  Yue Joseph Wang},
  title        = {Identifying cancer biomarkers by network-constrained support vector
                  machines},
  journal      = {{BMC} Syst. Biol.},
  volume       = {5},
  pages        = {161},
  year         = {2011},
  url          = {https://doi.org/10.1186/1752-0509-5-161},
  doi          = {10.1186/1752-0509-5-161},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ChenXRCW11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/ChenCCCWW11,
  author       = {Li Chen and
                  Peter L. Choyke and
                  Tsung{-}Han Chan and
                  Chong{-}Yung Chi and
                  Ge Wang and
                  Yue Joseph Wang},
  title        = {Tissue-Specific Compartmental Analysis for Dynamic Contrast-Enhanced
                  {MR} Imaging of Complex Tumors},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {30},
  number       = {12},
  pages        = {2044--2058},
  year         = {2011},
  url          = {https://doi.org/10.1109/TMI.2011.2160276},
  doi          = {10.1109/TMI.2011.2160276},
  timestamp    = {Thu, 18 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/ChenCCCWW11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TianZSW11,
  author       = {Ye Tian and
                  Bai Zhang and
                  Ie{-}Ming Shih and
                  Yue Joseph Wang},
  editor       = {Robert Grossman and
                  Andrey Rzhetsky and
                  Sun Kim and
                  Wei Wang},
  title        = {Knowledge-guided differential dependency network learning for detecting
                  structural changes in biological networks},
  booktitle    = {{ACM} International Conference on Bioinformatics, Computational Biology
                  and Biomedicine, BCB' 11, Chicago, IL, {USA} - July 31 - August 03,
                  2011},
  pages        = {254--263},
  publisher    = {{ACM}},
  year         = {2011},
  url          = {https://doi.org/10.1145/2147805.2147833},
  doi          = {10.1145/2147805.2147833},
  timestamp    = {Tue, 06 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bcb/TianZSW11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/TsaiTWR11,
  author       = {Tsung{-}Heng Tsai and
                  Mahlet G. Tadesse and
                  Yue Joseph Wang and
                  Habtom W. Ressom},
  editor       = {Fang{-}Xiang Wu and
                  Mohammed Javeed Zaki and
                  Shinichi Morishita and
                  Yi Pan and
                  Stephen Wong and
                  Anastasia Christianson and
                  Xiaohua Hu},
  title        = {Bayesian Alignment Model for {LC-MS} Data},
  booktitle    = {{IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2011, Atlanta, GA, USA, November 12-15, , 2011},
  pages        = {261--264},
  publisher    = {{IEEE} Computer Society},
  year         = {2011},
  url          = {https://doi.org/10.1109/BIBM.2011.81},
  doi          = {10.1109/BIBM.2011.81},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/TsaiTWR11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/RanjbarWR11,
  author       = {Mohammad R. Nezami Ranjbar and
                  Yue Joseph Wang and
                  Habtom W. Ressom},
  title        = {Quality assessment of {LC-MS} metabolomic data},
  booktitle    = {2011 {IEEE} International Conference on Bioinformatics and Biomedicine
                  Workshops, {BIBMW} 2011, Atlanta, GA, USA, November 12-15, 2011},
  pages        = {1034--1036},
  publisher    = {{IEEE} Computer Society},
  year         = {2011},
  url          = {https://doi.org/10.1109/BIBMW.2011.6112551},
  doi          = {10.1109/BIBMW.2011.6112551},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/RanjbarWR11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/GuWSWWCX11,
  author       = {Jinghua Gu and
                  Chen Wang and
                  Ie{-}Ming Shih and
                  Tian{-}Li Wang and
                  Yue Wang and
                  Robert Clarke and
                  Jianhua Xuan},
  title        = {{GIST:} {A} Gibbs sampler to identify intracellular signal transduction
                  pathways},
  booktitle    = {33rd Annual International Conference of the {IEEE} Engineering in
                  Medicine and Biology Society, {EMBC} 2011, Boston, MA, USA, August
                  30 - Sept. 3, 2011},
  pages        = {2434--2437},
  publisher    = {{IEEE}},
  year         = {2011},
  url          = {https://doi.org/10.1109/IEMBS.2011.6090677},
  doi          = {10.1109/IEMBS.2011.6090677},
  timestamp    = {Wed, 01 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/embc/GuWSWWCX11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1106-2124,
  author       = {Ge Wang and
                  Jie Zhang and
                  Hao Gao and
                  Victor Weir and
                  Hengyong Yu and
                  Wenxiang Cong and
                  Xiaochen Xu and
                  Haiou Shen and
                  James Bennett and
                  Yue Joseph Wang and
                  Michael W. Vannier},
  title        = {Omni-tomography/Multi-tomography -- Integrating Multiple Modalities
                  for Simultaneous Imaging},
  journal      = {CoRR},
  volume       = {abs/1106.2124},
  year         = {2011},
  url          = {http://arxiv.org/abs/1106.2124},
  eprinttype   = {arXiv},
  eprint       = {1106.2124},
  timestamp    = {Sat, 23 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1106-2124.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenXRWHC10,
  author       = {Li Chen and
                  Jianhua Xuan and
                  Rebecca B. Riggins and
                  Yue Joseph Wang and
                  Eric P. Hoffman and
                  Robert Clarke},
  title        = {Multilevel support vector regression analysis to identify condition-specific
                  regulatory networks},
  journal      = {Bioinform.},
  volume       = {26},
  number       = {11},
  pages        = {1416--1422},
  year         = {2010},
  url          = {https://doi.org/10.1093/bioinformatics/btq144},
  doi          = {10.1093/BIOINFORMATICS/BTQ144},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChenXRWHC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangXLWZHC10,
  author       = {Chen Wang and
                  Jianhua Xuan and
                  Huai Li and
                  Yue Joseph Wang and
                  Ming Zhan and
                  Eric P. Hoffman and
                  Robert Clarke},
  title        = {Knowledge-guided gene ranking by coordinative component analysis},
  journal      = {{BMC} Bioinform.},
  volume       = {11},
  pages        = {162},
  year         = {2010},
  url          = {https://doi.org/10.1186/1471-2105-11-162},
  doi          = {10.1186/1471-2105-11-162},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/WangXLWZHC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijfipm/FengYWSW10,
  author       = {Yuanjian Feng and
                  Guoqiang Yu and
                  Tian{-}Li Wang and
                  Ie{-}Ming Shih and
                  Yue Joseph Wang},
  title        = {Analysing {DNA} copy number changes using Fused Margin Regression},
  journal      = {Int. J. Funct. Informatics Pers. Medicine},
  volume       = {3},
  number       = {1},
  pages        = {3--15},
  year         = {2010},
  url          = {https://doi.org/10.1504/IJFIPM.2010.033242},
  doi          = {10.1504/IJFIPM.2010.033242},
  timestamp    = {Thu, 18 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijfipm/FengYWSW10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jmlr/YuFMXHCDSW10,
  author       = {Guoqiang Yu and
                  Yuanjian Feng and
                  David J. Miller and
                  Jianhua Xuan and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Ben Davidson and
                  Ie{-}Ming Shih and
                  Yue Joseph Wang},
  title        = {Matched Gene Selection and Committee Classifier for Molecular Classification
                  of Heterogeneous Diseases},
  journal      = {J. Mach. Learn. Res.},
  volume       = {11},
  pages        = {2141--2167},
  year         = {2010},
  url          = {https://dl.acm.org/doi/10.5555/1756006.1859924},
  doi          = {10.5555/1756006.1859924},
  timestamp    = {Thu, 02 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jmlr/YuFMXHCDSW10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pami/WangCCW10,
  author       = {Fa{-}Yu Wang and
                  Chong{-}Yung Chi and
                  Tsung{-}Han Chan and
                  Yue Joseph Wang},
  title        = {Nonnegative Least-Correlated Component Analysis for Separation of
                  Dependent Sources by Volume Maximization},
  journal      = {{IEEE} Trans. Pattern Anal. Mach. Intell.},
  volume       = {32},
  number       = {5},
  pages        = {875--888},
  year         = {2010},
  url          = {https://doi.org/10.1109/TPAMI.2009.72},
  doi          = {10.1109/TPAMI.2009.72},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/pami/WangCCW10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icmla/GuXWRC10,
  author       = {Jinghua Gu and
                  Jianhua Xuan and
                  Yue Joseph Wang and
                  Rebecca B. Riggins and
                  Robert Clarke},
  editor       = {Sorin Draghici and
                  Taghi M. Khoshgoftaar and
                  Vasile Palade and
                  Witold Pedrycz and
                  M. Arif Wani and
                  Xingquan Zhu},
  title        = {Identification of Transcriptional Regulatory Networks by Learning
                  the Marginal Function of Outlier Sum Statistic},
  booktitle    = {The Ninth International Conference on Machine Learning and Applications,
                  {ICMLA} 2010, Washington, DC, USA, 12-14 December 2010},
  pages        = {281--286},
  publisher    = {{IEEE} Computer Society},
  year         = {2010},
  url          = {https://doi.org/10.1109/ICMLA.2010.48},
  doi          = {10.1109/ICMLA.2010.48},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icmla/GuXWRC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icmla/WangHWXH10,
  author       = {Chen Wang and
                  Sook Shin Ha and
                  Yue Joseph Wang and
                  Jianhua Xuan and
                  Eric P. Hoffman},
  editor       = {Sorin Draghici and
                  Taghi M. Khoshgoftaar and
                  Vasile Palade and
                  Witold Pedrycz and
                  M. Arif Wani and
                  Xingquan Zhu},
  title        = {Computational Analysis of Muscular Dystrophy Sub-types Using a Novel
                  Integrative Scheme},
  booktitle    = {The Ninth International Conference on Machine Learning and Applications,
                  {ICMLA} 2010, Washington, DC, USA, 12-14 December 2010},
  pages        = {287--292},
  publisher    = {{IEEE} Computer Society},
  year         = {2010},
  url          = {https://doi.org/10.1109/ICMLA.2010.49},
  doi          = {10.1109/ICMLA.2010.49},
  timestamp    = {Mon, 30 Dec 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icmla/WangHWXH10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/uai/ZhangW10,
  author       = {Bai Zhang and
                  Yue Joseph Wang},
  editor       = {Peter Gr{\"{u}}nwald and
                  Peter Spirtes},
  title        = {Learning Structural Changes of Gaussian Graphical Models in Controlled
                  Experiments},
  booktitle    = {{UAI} 2010, Proceedings of the Twenty-Sixth Conference on Uncertainty
                  in Artificial Intelligence, Catalina Island, CA, USA, July 8-11, 2010},
  pages        = {701--708},
  publisher    = {{AUAI} Press},
  year         = {2010},
  url          = {https://dslpitt.org/uai/displayArticleDetails.jsp?mmnu=1\&\#38;smnu=2\&\#38;article\_id=2141\&\#38;proceeding\_id=26},
  timestamp    = {Wed, 03 Feb 2021 11:09:25 +0100},
  biburl       = {https://dblp.org/rec/conf/uai/ZhangW10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/cu/10/MaCCW10,
  author       = {Wing{-}Kin Ma and
                  Tsung{-}Han Chan and
                  Chong{-}Yung Chi and
                  Yue Wang},
  editor       = {Daniel P. Palomar and
                  Yonina C. Eldar},
  title        = {Convex analysis for non-negative blind source separation with application
                  in imaging},
  booktitle    = {Convex Optimization in Signal Processing and Communications},
  pages        = {239--265},
  publisher    = {Cambridge University Press},
  year         = {2010},
  timestamp    = {Sun, 19 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/books/cu/10/MaCCW10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangLRZXZHCW09,
  author       = {Bai Zhang and
                  Huai Li and
                  Rebecca B. Riggins and
                  Ming Zhan and
                  Jianhua Xuan and
                  Zhen Zhang and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Yue Joseph Wang},
  title        = {Differential dependency network analysis to identify condition-specific
                  topological changes in biological networks},
  journal      = {Bioinform.},
  volume       = {25},
  number       = {4},
  pages        = {526--532},
  year         = {2009},
  url          = {https://doi.org/10.1093/bioinformatics/btn660},
  doi          = {10.1093/BIOINFORMATICS/BTN660},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ZhangLRZXZHCW09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MillerZYLCLHW09,
  author       = {David J. Miller and
                  Yanxin Zhang and
                  Guoqiang Yu and
                  Yongmei Liu and
                  Li Chen and
                  Carl D. Langefeld and
                  David M. Herrington and
                  Yue Joseph Wang},
  title        = {An algorithm for learning maximum entropy probability models of disease
                  risk that efficiently searches and sparingly encodes multilocus genomic
                  interactions},
  journal      = {Bioinform.},
  volume       = {25},
  number       = {19},
  pages        = {2478--2485},
  year         = {2009},
  url          = {https://doi.org/10.1093/bioinformatics/btp435},
  doi          = {10.1093/BIOINFORMATICS/BTP435},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/MillerZYLCLHW09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcbdd/ChenXWHRC09,
  author       = {Li Chen and
                  Jianhua Xuan and
                  Yue Joseph Wang and
                  Eric P. Hoffman and
                  Rebecca B. Riggins and
                  Robert Clarke},
  title        = {Identification of condition-specific regulatory modules through multi-level
                  motif and mRNA expression analysis},
  journal      = {Int. J. Comput. Biol. Drug Des.},
  volume       = {2},
  number       = {1},
  pages        = {1--20},
  year         = {2009},
  url          = {https://doi.org/10.1504/IJCBDD.2009.027582},
  doi          = {10.1504/IJCBDD.2009.027582},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcbdd/ChenXWHRC09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdmb/ChenXWWSWZCH09,
  author       = {Li Chen and
                  Jianhua Xuan and
                  Chen Wang and
                  Yue Joseph Wang and
                  Ie{-}Ming Shih and
                  Tian{-}Li Wang and
                  Zhen Zhang and
                  Robert Clarke and
                  Eric P. Hoffman},
  title        = {Biomarker identification by knowledge-driven multilevel {ICA} and
                  motif analysis},
  journal      = {Int. J. Data Min. Bioinform.},
  volume       = {3},
  number       = {4},
  pages        = {365--381},
  year         = {2009},
  url          = {https://doi.org/10.1504/IJDMB.2009.029201},
  doi          = {10.1504/IJDMB.2009.029201},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijdmb/ChenXWWSWZCH09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/YuZXSW09,
  author       = {Guoqiang Yu and
                  Bai Zhang and
                  Jianfeng Xu and
                  Ie{-}Ming Shih and
                  Yue Joseph Wang},
  title        = {Accurate Estimation of Genomic Deletions and Normal Cell Contamination
                  by Bayesian Analysis of Mixtures},
  booktitle    = {2009 {IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2009, Washington, DC, USA, November 1-4, 2009, Proceedings},
  pages        = {332--337},
  publisher    = {{IEEE} Computer Society},
  year         = {2009},
  url          = {https://doi.org/10.1109/BIBM.2009.54},
  doi          = {10.1109/BIBM.2009.54},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/YuZXSW09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/FengYWSW09,
  author       = {Yuanjian Feng and
                  Guoqiang Yu and
                  Tian{-}Li Wang and
                  Ie{-}Ming Shih and
                  Yue Joseph Wang},
  title        = {Analyzing {DNA} Copy Number Changes Using Fused Margin Regression},
  booktitle    = {2009 {IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2009, Washington, DC, USA, November 1-4, 2009, Proceedings},
  pages        = {388--391},
  publisher    = {{IEEE} Computer Society},
  year         = {2009},
  url          = {https://doi.org/10.1109/BIBM.2009.57},
  doi          = {10.1109/BIBM.2009.57},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/FengYWSW09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csie/WangZXW09,
  author       = {Wenjun Wang and
                  Junying Zhang and
                  Jin Xu and
                  Yue Joseph Wang},
  editor       = {Mark Burgin and
                  Masud H. Chowdhury and
                  Chan H. Ham and
                  Simone A. Ludwig and
                  Weilian Su and
                  Sumanth Yenduri},
  title        = {A Graph-Based Approach for Clustering Analysis of Gene Expression
                  Data by Using Topological Features},
  booktitle    = {{CSIE} 2009, 2009 {WRI} World Congress on Computer Science and Information
                  Engineering, March 31 - April 2, 2009, Los Angeles, California, USA,
                  7 Volumes},
  pages        = {559--563},
  publisher    = {{IEEE} Computer Society},
  year         = {2009},
  url          = {https://doi.org/10.1109/CSIE.2009.10},
  doi          = {10.1109/CSIE.2009.10},
  timestamp    = {Mon, 13 Apr 2026 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/csie/WangZXW09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenXWSWZHC08,
  author       = {Li Chen and
                  Jianhua Xuan and
                  Chen Wang and
                  Ie{-}Ming Shih and
                  Yue Joseph Wang and
                  Zhen Zhang and
                  Eric P. Hoffman and
                  Robert Clarke},
  title        = {Knowledge-guided multi-scale independent component analysis for biomarker
                  identification},
  journal      = {{BMC} Bioinform.},
  volume       = {9},
  year         = {2008},
  url          = {https://doi.org/10.1186/1471-2105-9-416},
  doi          = {10.1186/1471-2105-9-416},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ChenXWSWZHC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangXCZWCH08,
  author       = {Chen Wang and
                  Jianhua Xuan and
                  Li Chen and
                  Po Zhao and
                  Yue Joseph Wang and
                  Robert Clarke and
                  Eric P. Hoffman},
  title        = {Motif-directed network component analysis for regulatory network inference},
  journal      = {{BMC} Bioinform.},
  volume       = {9},
  number       = {{S-1}},
  year         = {2008},
  url          = {https://doi.org/10.1186/1471-2105-9-S1-S21},
  doi          = {10.1186/1471-2105-9-S1-S21},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/WangXCZWCH08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhuLMWXCHW08,
  author       = {Yitan Zhu and
                  Huai Li and
                  David J. Miller and
                  Zuyi Wang and
                  Jianhua Xuan and
                  Robert Clarke and
                  Eric P. Hoffman and
                  Yue Joseph Wang},
  title        = {caBIG\({}^{\mbox{TM}}\) {VISDA:} Modeling, visualization, and discovery
                  for cluster analysis of genomic data},
  journal      = {{BMC} Bioinform.},
  volume       = {9},
  year         = {2008},
  url          = {https://doi.org/10.1186/1471-2105-9-383},
  doi          = {10.1186/1471-2105-9-383},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ZhuLMWXCHW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/MillerPW08,
  author       = {David J. Miller and
                  Siddharth Pal and
                  Yue Joseph Wang},
  title        = {Extensions of transductive learning for distributed ensemble classification
                  and application to biometric authentication},
  journal      = {Neurocomputing},
  volume       = {72},
  number       = {1-3},
  pages        = {119--125},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.neucom.2008.03.018},
  doi          = {10.1016/J.NEUCOM.2008.03.018},
  timestamp    = {Sat, 20 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijon/MillerPW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tsp/ChanMCW08,
  author       = {Tsung{-}Han Chan and
                  Wing{-}Kin Ma and
                  Chong{-}Yung Chi and
                  Yue Joseph Wang},
  title        = {A Convex Analysis Framework for Blind Separation of Non-Negative Sources},
  journal      = {{IEEE} Trans. Signal Process.},
  volume       = {56},
  number       = {10-2},
  pages        = {5120--5134},
  year         = {2008},
  url          = {https://doi.org/10.1109/TSP.2008.928937},
  doi          = {10.1109/TSP.2008.928937},
  timestamp    = {Tue, 10 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tsp/ChanMCW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcbgc/XiongWZWHCX08,
  author       = {Jianghui Xiong and
                  Chen Wang and
                  Bai Zhang and
                  Yue Joseph Wang and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Jianhua Xuan},
  editor       = {Mukesh Doble and
                  William Loging and
                  James Malone and
                  Vincent Shin{-}Mu Tseng},
  title        = {Inferring Condition-Specific miRNA-Gene Modules from miRNA and mRNA
                  Profiling Data},
  booktitle    = {International Conference on Bioinformatics, Computational Biology,
                  Genomics and Chemoinformatics, BCBGC-08, Orlando, Florida, {USA} ,
                  July 7-10, 2008},
  pages        = {49--55},
  publisher    = {{ISRST}},
  year         = {2008},
  timestamp    = {Tue, 14 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bcbgc/XiongWZWHCX08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biocomp/ChenXRWHC08,
  author       = {Li Chen and
                  Jianhua Xuan and
                  Rebecca B. Riggins and
                  Yue Joseph Wang and
                  Eric P. Hoffman and
                  Robert Clarke},
  editor       = {Hamid R. Arabnia and
                  Mary Qu Yang and
                  Jack Y. Yang},
  title        = {Identification of Condition-specific Regulatory Modules by Multi-level
                  Motif and mRNA Expression Analysis},
  booktitle    = {International Conference on Bioinformatics {\&} Computational
                  Biology, {BIOCOMP} 2008, July 14-17, 2008, Las Vegas Nevada, USA,
                  2 Volumes},
  pages        = {23--28},
  publisher    = {{CSREA} Press},
  year         = {2008},
  timestamp    = {Thu, 16 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biocomp/ChenXRWHC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biocomp/GongXRWHC08,
  author       = {Ting Gong and
                  Jianhua Xuan and
                  Rebecca B. Riggins and
                  Yue Joseph Wang and
                  Eric P. Hoffman and
                  Robert Clarke},
  editor       = {Hamid R. Arabnia and
                  Mary Qu Yang and
                  Jack Y. Yang},
  title        = {Exploring Transcriptional Modules Through Integrative Gene Clustering
                  Guided by Transcription Factor Binding Information},
  booktitle    = {International Conference on Bioinformatics {\&} Computational
                  Biology, {BIOCOMP} 2008, July 14-17, 2008, Las Vegas Nevada, USA,
                  2 Volumes},
  pages        = {191--197},
  publisher    = {{CSREA} Press},
  year         = {2008},
  timestamp    = {Mon, 04 Apr 2011 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biocomp/GongXRWHC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icassp/ChanMCW08,
  author       = {Tsung{-}Han Chan and
                  Wing{-}Kin Ma and
                  Chong{-}Yung Chi and
                  Yue Joseph Wang},
  title        = {Blind separation of non-negative sources by convex analysis: Effective
                  method using linear programming},
  booktitle    = {Proceedings of the {IEEE} International Conference on Acoustics, Speech,
                  and Signal Processing, {ICASSP} 2008, March 30 - April 4, 2008, Caesars
                  Palace, Las Vegas, Nevada, {USA}},
  pages        = {3493--3496},
  publisher    = {{IEEE}},
  year         = {2008},
  url          = {https://doi.org/10.1109/ICASSP.2008.4518404},
  doi          = {10.1109/ICASSP.2008.4518404},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/icassp/ChanMCW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iciar/ZhouXWW08,
  author       = {Bin Zhou and
                  Jianhua Xuan and
                  Qingrong Wu and
                  Yue Joseph Wang},
  editor       = {Aur{\'{e}}lio C. Campilho and
                  Mohamed S. Kamel},
  title        = {3-D Deformation Guided On-Line Modification of Multi-leaf Collimators
                  for Adaptive Radiation Therapy},
  booktitle    = {Image Analysis and Recognition, 5th International Conference, {ICIAR}
                  2008, P{\'{o}}voa de Varzim, Portugal, June 25-27, 2008. Proceedings},
  series       = {Lecture Notes in Computer Science},
  pages        = {798--806},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-69812-8\_79},
  doi          = {10.1007/978-3-540-69812-8\_79},
  timestamp    = {Tue, 14 May 2019 10:00:39 +0200},
  biburl       = {https://dblp.org/rec/conf/iciar/ZhouXWW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icmla/ChenXWRC08,
  author       = {Li Chen and
                  Jianhua Xuan and
                  Yue Joseph Wang and
                  Rebecca B. Riggins and
                  Robert Clarke},
  editor       = {M. Arif Wani and
                  Xue{-}wen Chen and
                  David P. Casasent and
                  Lukasz A. Kurgan and
                  Tony Hu and
                  Khalid Hafeez},
  title        = {Network-Constrained Support Vector Machine for Classification},
  booktitle    = {Seventh International Conference on Machine Learning and Applications,
                  {ICMLA} 2008, San Diego, California, USA, 11-13 December 2008},
  pages        = {60--65},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/ICMLA.2008.55},
  doi          = {10.1109/ICMLA.2008.55},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icmla/ChenXWRC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpr/TaoXFCSW08,
  author       = {Yimo Tao and
                  Jianhua Xuan and
                  Matthew T. Freedman and
                  Gloria Chepko and
                  Peter G. Shields and
                  Yue Joseph Wang},
  title        = {Imaging biomarker analysis of rat mammary fat pads and glandular tissues
                  in {MRI} images},
  booktitle    = {19th International Conference on Pattern Recognition {(ICPR} 2008),
                  December 8-11, 2008, Tampa, Florida, {USA}},
  pages        = {1--4},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/ICPR.2008.4761693},
  doi          = {10.1109/ICPR.2008.4761693},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icpr/TaoXFCSW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ChenCCCWW08,
  author       = {Li Chen and
                  Tsung{-}Han Chan and
                  Peter L. Choyke and
                  Chong{-}Yung Chi and
                  Ge Wang and
                  Yue Joseph Wang},
  title        = {Convex analysis and separation of composite signals in {DCE-MRI}},
  booktitle    = {Proceedings of the 2008 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Paris, France, May 14-17, 2008},
  pages        = {1557--1560},
  publisher    = {{IEEE}},
  year         = {2008},
  url          = {https://doi.org/10.1109/ISBI.2008.4541307},
  doi          = {10.1109/ISBI.2008.4541307},
  timestamp    = {Thu, 25 Dec 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/isbi/ChenCCCWW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangXCZWCH08,
  author       = {Chen Wang and
                  Jianhua Xuan and
                  Li Chen and
                  Po Zhao and
                  Yue Joseph Wang and
                  Robert Clarke and
                  Eric P. Hoffman},
  editor       = {Ion I. Mandoiu and
                  Raj Sunderraman and
                  Alexander Zelikovsky},
  title        = {Integrative Network Component Analysis for Regulatory Network Reconstruction},
  booktitle    = {Bioinformatics Research and Applications, Fourth International Symposium,
                  {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
  series       = {Lecture Notes in Computer Science},
  pages        = {196--207},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-79450-9\_19},
  doi          = {10.1007/978-3-540-79450-9\_19},
  timestamp    = {Wed, 25 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbra/WangXCZWCH08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GongXCRWHC08,
  author       = {Ting Gong and
                  Jianhua Xuan and
                  Li Chen and
                  Rebecca B. Riggins and
                  Yue Joseph Wang and
                  Eric P. Hoffman and
                  Robert Clarke},
  editor       = {Ion I. Mandoiu and
                  Raj Sunderraman and
                  Alexander Zelikovsky},
  title        = {Sparse Decomposition of Gene Expression Data to Infer Transcriptional
                  Modules Guided by Motif Information},
  booktitle    = {Bioinformatics Research and Applications, Fourth International Symposium,
                  {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
  series       = {Lecture Notes in Computer Science},
  pages        = {244--255},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-79450-9\_23},
  doi          = {10.1007/978-3-540-79450-9\_23},
  timestamp    = {Wed, 25 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbra/GongXCRWHC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/WangXWZW08,
  author       = {Bin Wang and
                  Jianhua Xuan and
                  Qingrong Jackie Wu and
                  Su Zhang and
                  Yue Wang},
  editor       = {Joseph M. Reinhardt and
                  Josien P. W. Pluim},
  title        = {Deformation estimation and analysis for adaptive radiation therapy},
  booktitle    = {Medical Imaging 2008: Image Processing, San Diego, California, United
                  States, 16-21 February 2008},
  series       = {{SPIE} Proceedings},
  pages        = {691436},
  publisher    = {{SPIE}},
  year         = {2008},
  url          = {https://doi.org/10.1117/12.773548},
  doi          = {10.1117/12.773548},
  timestamp    = {Wed, 27 Nov 2024 12:16:17 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/WangXWZW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangLZYNSSXCW07,
  author       = {Jiajing Wang and
                  Huai Li and
                  Yitan Zhu and
                  Malik Yousef and
                  Michael Nebozhyn and
                  Michael M. Showe and
                  Louise C. Showe and
                  Jianhua Xuan and
                  Robert Clarke and
                  Yue Joseph Wang},
  title        = {{VISDA:} an open-source caBIG\({}^{\mbox{TM}}\) analytical tool for
                  data clustering and beyond},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {15},
  pages        = {2024--2027},
  year         = {2007},
  url          = {https://doi.org/10.1093/bioinformatics/btm290},
  doi          = {10.1093/BIOINFORMATICS/BTM290},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WangLZYNSSXCW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/XuanWDFWKBWPWCCH07,
  author       = {Jianhua Xuan and
                  Yue Joseph Wang and
                  Yibin Dong and
                  Yuanjian Feng and
                  Bin Wang and
                  Javed I. Khan and
                  Marina Bakay and
                  Zuyi Wang and
                  Lauren Pachman and
                  Sara Winokur and
                  Yi{-}Wen Chen and
                  Robert Clarke and
                  Eric P. Hoffman},
  title        = {Gene Selection for Multiclass Prediction by Weighted Fisher Criterion},
  journal      = {{EURASIP} J. Bioinform. Syst. Biol.},
  volume       = {2007},
  year         = {2007},
  url          = {https://doi.org/10.1155/2007/64628},
  doi          = {10.1155/2007/64628},
  timestamp    = {Sat, 27 Jul 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ejbsb/XuanWDFWKBWPWCCH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbi/XuanKZCZW07,
  author       = {Jianhua Xuan and
                  Uwe Klimach and
                  Hongzhi Zhao and
                  Qiushui Chen and
                  Yingyin Zou and
                  Yue Joseph Wang},
  title        = {Improved Diagnostics Using Polarization Imaging and Artificial Neural
                  Networks},
  journal      = {Int. J. Biomed. Imaging},
  volume       = {2007},
  pages        = {74143:1--74143:11},
  year         = {2007},
  url          = {https://doi.org/10.1155/2007/74143},
  doi          = {10.1155/2007/74143},
  timestamp    = {Sun, 21 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijbi/XuanKZCZW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/WangXFSW07,
  author       = {Bin Wang and
                  Jianhua Xuan and
                  Matthew T. Freedman and
                  Peter G. Shields and
                  Yue Joseph Wang},
  title        = {Rat Mammary Fat Pad Segmentation and Growth Rate Evaluation in {T1}
                  Weighted {MR} Images},
  booktitle    = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics
                  and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical
                  School, Boston, MA, {USA}},
  pages        = {240--245},
  publisher    = {{IEEE} Computer Society},
  year         = {2007},
  url          = {https://doi.org/10.1109/BIBE.2007.4375571},
  doi          = {10.1109/BIBE.2007.4375571},
  timestamp    = {Thu, 25 Jul 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bibe/WangXFSW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biocomp/WangXGCHW07,
  author       = {Chen Wang and
                  Jianhua Xuan and
                  Ting Gong and
                  Robert Clarke and
                  Eric P. Hoffman and
                  Yue Joseph Wang},
  editor       = {Hamid R. Arabnia and
                  Mary Qu Yang and
                  Jack Y. Yang},
  title        = {Stability-Based Dimension Estimation of {ICA} with Application to
                  Microarray Data Analysis},
  booktitle    = {International Conference on Bioinformatics {\&} Computational
                  Biology, {BIOCOMP} 2007, Volume I, June 25-28, 2007, Las Vegas Nevada,
                  {USA}},
  pages        = {132--138},
  publisher    = {{CSREA} Press},
  year         = {2007},
  timestamp    = {Tue, 14 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/biocomp/WangXGCHW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icassp/ChanMCW07,
  author       = {Tsung{-}Han Chan and
                  Wing{-}Kin Ma and
                  Chong{-}Yung Chi and
                  Yue Wang},
  title        = {A Convex Analysis Based Criterion for Blind Separation of Non-Negative
                  Sources},
  booktitle    = {Proceedings of the {IEEE} International Conference on Acoustics, Speech,
                  and Signal Processing, {ICASSP} 2007, Honolulu, Hawaii, USA, April
                  15-20, 2007},
  pages        = {961--964},
  publisher    = {{IEEE}},
  year         = {2007},
  url          = {https://doi.org/10.1109/ICASSP.2007.366841},
  doi          = {10.1109/ICASSP.2007.366841},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/icassp/ChanMCW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icmla/ChenWSWZWCHX07,
  author       = {Li Chen and
                  Chen Wang and
                  Ie{-}Ming Shih and
                  Tian{-}Li Wang and
                  Zhen Zhang and
                  Yue Joseph Wang and
                  Robert Clarke and
                  Eric P. Hoffman and
                  Jianhua Xuan},
  editor       = {M. Arif Wani and
                  Mehmed M. Kantardzic and
                  Tao Li and
                  Ying Liu and
                  Lukasz A. Kurgan and
                  Jieping Ye and
                  Mitsunori Ogihara and
                  Seref Sagiroglu and
                  Xue{-}wen Chen and
                  Leif E. Peterson and
                  Khalid Hafeez},
  title        = {Biomarker Identification by Knowledge-Driven Multi-Level {ICA} and
                  Motif Analysis},
  booktitle    = {The Sixth International Conference on Machine Learning and Applications,
                  {ICMLA} 2007, Cincinnati, Ohio, USA, 13-15 December 2007},
  pages        = {560--566},
  publisher    = {{IEEE} Computer Society},
  year         = {2007},
  url          = {https://doi.org/10.1109/ICMLA.2007.58},
  doi          = {10.1109/ICMLA.2007.58},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icmla/ChenWSWZWCHX07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mva/WangXFSW07,
  author       = {Bin Wang and
                  Jianhua Xuan and
                  Matthew T. Freedman and
                  Peter G. Shields and
                  Yue Joseph Wang},
  title        = {Rat Mammary Gland Analysis in {T1} Weighted {MR} Images},
  booktitle    = {Proceedings of the {IAPR} Conference on Machine Vision Applications
                  {(IAPR} {MVA} 2007), May 16-18, 2007, Tokyo, Japan},
  pages        = {520--523},
  year         = {2007},
  url          = {http://b2.cvl.iis.u-tokyo.ac.jp/mva/proceedings/2007CD/papers/13-22.pdf},
  timestamp    = {Thu, 25 Jul 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/mva/WangXFSW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangWXDBFCH06,
  author       = {Zuyi Wang and
                  Yue Joseph Wang and
                  Jianhua Xuan and
                  Yibin Dong and
                  Marina Bakay and
                  Yuanjian Feng and
                  Robert Clarke and
                  Eric P. Hoffman},
  title        = {Optimized multilayer perceptrons for molecular classification and
                  diagnosis using genomic data},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {6},
  pages        = {755--761},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btk036},
  doi          = {10.1093/BIOINFORMATICS/BTK036},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WangWXDBFCH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejasp/ChiLLWY06,
  author       = {Chong{-}Yung Chi and
                  Ta{-}Sung Lee and
                  Zhi{-}Quan Luo and
                  Yue Joseph Wang and
                  Kung Yao},
  title        = {Multisensor Processing for Signal Extraction and Applications},
  journal      = {{EURASIP} J. Adv. Signal Process.},
  volume       = {2006},
  year         = {2006},
  url          = {https://doi.org/10.1155/ASP/2006/26508},
  doi          = {10.1155/ASP/2006/26508},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ejasp/ChiLLWY06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbi/WangXSC06,
  author       = {Yue Joseph Wang and
                  Jianhua Xuan and
                  Rujirutana Srikanchana and
                  Peter L. Choyke},
  title        = {Modeling and Reconstruction of Mixed Functional and Molecular Patterns},
  journal      = {Int. J. Biomed. Imaging},
  volume       = {2006},
  pages        = {29707:1--29707:9},
  year         = {2006},
  url          = {https://doi.org/10.1155/IJBI/2006/29707},
  doi          = {10.1155/IJBI/2006/29707},
  timestamp    = {Sun, 21 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijbi/WangXSC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbi/XuanWFAS06,
  author       = {Jianhua Xuan and
                  Yue Joseph Wang and
                  Matthew T. Freedman and
                  T{\"{u}}lay Adali and
                  Peter G. Shields},
  title        = {Nonrigid Medical Image Registration by Finite-Element Deformable Sheet-Curve
                  Models},
  journal      = {Int. J. Biomed. Imaging},
  volume       = {2006},
  pages        = {73430:1--73430:9},
  year         = {2006},
  url          = {https://doi.org/10.1155/IJBI/2006/73430},
  doi          = {10.1155/IJBI/2006/73430},
  timestamp    = {Sun, 21 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijbi/XuanWFAS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caine/MolineauxXGZHCW06,
  author       = {Justin Molineaux and
                  Jianhua Xuan and
                  Ting Gong and
                  Yitan Zhu and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Yue Joseph Wang},
  editor       = {Thomas Philip},
  title        = {ModVis: An information visualization tool for gene module discovery},
  booktitle    = {Proceedings of the {ISCA} 19th International Conference on Computer
                  Applications in Industry and Engineering, {CAINE} 2006, November 13-15,
                  2006, Las Vegas, Nevada, {USA}},
  pages        = {24--31},
  publisher    = {{ISCA}},
  year         = {2006},
  timestamp    = {Mon, 04 Apr 2011 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/caine/MolineauxXGZHCW06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibcb/RessomZXWC06,
  author       = {Habtom W. Ressom and
                  Yuji Zhang and
                  Jianhua Xuan and
                  Yue Joseph Wang and
                  Robert Clarke},
  title        = {Inference of Gene Regulatory Networks from Time Course Gene Expression
                  Data Using Neural Networks and Swarm Intelligence},
  booktitle    = {Proceedings of the 2006 {IEEE} Symposium on Computational Intelligence
                  in Bioinformatics and Computational Biology, {CIBCB} 2006, Renaissance
                  Hotel Downtown, Toronto, Ontario, Canada, September 28-29, 2006},
  pages        = {1--8},
  publisher    = {{IEEE}},
  year         = {2006},
  url          = {https://doi.org/10.1109/CIBCB.2006.330969},
  doi          = {10.1109/CIBCB.2006.330969},
  timestamp    = {Mon, 09 Dec 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cibcb/RessomZXWC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/RessomZXWC06,
  author       = {Habtom W. Ressom and
                  Yuji Zhang and
                  Jianhua Xuan and
                  Yue Wang and
                  Robert Clarke},
  title        = {Inferring Network Interactions Using Recurrent Neural Networks and
                  Swarm Intelligence},
  booktitle    = {28th International Conference of the {IEEE} Engineering in Medicine
                  and Biology Society, {EMBC} 2006, New York City, NY, USA, August 30
                  - September 3, 2006, Main Volume},
  pages        = {4241--4244},
  publisher    = {{IEEE}},
  year         = {2006},
  url          = {https://doi.org/10.1109/IEMBS.2006.259812},
  doi          = {10.1109/IEMBS.2006.259812},
  timestamp    = {Mon, 09 Dec 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/embc/RessomZXWC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/ZhuWFXMHW06,
  author       = {Yitan Zhu and
                  Zuyi Wang and
                  Yuanjian Feng and
                  Jianhua Xuan and
                  David J. Miller and
                  Eric P. Hoffman and
                  Yue Wang},
  title        = {Phenotypic-Specific Gene Module Discovery using a Diagnostic Tree
                  and caBIGTM {VISDA}},
  booktitle    = {28th International Conference of the {IEEE} Engineering in Medicine
                  and Biology Society, {EMBC} 2006, New York City, NY, USA, August 30
                  - September 3, 2006, Main Volume},
  pages        = {5767--5770},
  publisher    = {{IEEE}},
  year         = {2006},
  url          = {https://doi.org/10.1109/IEMBS.2006.260031},
  doi          = {10.1109/IEMBS.2006.260031},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/embc/ZhuWFXMHW06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/GongZXLCHW06,
  author       = {Ting Gong and
                  Yitan Zhu and
                  Jianhua Xuan and
                  Huai Li and
                  Robert Clarke and
                  Eric P. Hoffman and
                  Yue Wang},
  title        = {Latent Variable and nICA Modeling of Pathway Gene Module Composite},
  booktitle    = {28th International Conference of the {IEEE} Engineering in Medicine
                  and Biology Society, {EMBC} 2006, New York City, NY, USA, August 30
                  - September 3, 2006, Main Volume},
  pages        = {5872--5875},
  publisher    = {{IEEE}},
  year         = {2006},
  url          = {https://doi.org/10.1109/IEMBS.2006.260697},
  doi          = {10.1109/IEMBS.2006.260697},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/embc/GongZXLCHW06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/LiuLFWRKLL06,
  author       = {Chu Chuan Liu and
                  Shih{-}Chung Ben Lo and
                  Matthew T. Freedman and
                  Yue Joseph Wang and
                  David Rich and
                  John Kula and
                  Bob Lasser and
                  Marvin E. Lasser},
  title        = {Transmission ultrasound computed tomography using a {PE-CMOS} sensor
                  array: a preliminary animal study},
  booktitle    = {Proceedings of the 2006 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Arlington, VA, USA, 6-9 April 2006},
  pages        = {908--911},
  publisher    = {{IEEE}},
  year         = {2006},
  url          = {https://doi.org/10.1109/ISBI.2006.1625066},
  doi          = {10.1109/ISBI.2006.1625066},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/LiuLFWRKLL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isnn/ZhangHWW06,
  author       = {Junying Zhang and
                  Hongyi Zhang and
                  Le Wei and
                  Yue Joseph Wang},
  editor       = {Jun Wang and
                  Zhang Yi and
                  Jacek M. Zurada and
                  Bao{-}Liang Lu and
                  Hujun Yin},
  title        = {Blind Source Separation with Pattern Expression {NMF}},
  booktitle    = {Advances in Neural Networks - {ISNN} 2006, Third International Symposium
                  on Neural Networks, Chengdu, China, May 28 - June 1, 2006, Proceedings,
                  Part {I}},
  series       = {Lecture Notes in Computer Science},
  pages        = {1159--1164},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11759966\_171},
  doi          = {10.1007/11759966\_171},
  timestamp    = {Tue, 20 Aug 2024 07:54:45 +0200},
  biburl       = {https://dblp.org/rec/conf/isnn/ZhangHWW06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/prib/WangWCC06,
  author       = {Fa{-}Yu Wang and
                  Yue Joseph Wang and
                  Tsung{-}Han Chan and
                  Chong{-}Yung Chi},
  editor       = {Jagath C. Rajapakse and
                  Limsoon Wong and
                  Raj Acharya},
  title        = {Blind Separation of Multichannel Biomedical Image Patterns by Non-negative
                  Least-Correlated Component Analysis},
  booktitle    = {Pattern Recognition in Bioinformatics, International Workshop, {PRIB}
                  2006, Hong Kong, China, August 20, 2006, Proceedings},
  series       = {Lecture Notes in Computer Science},
  pages        = {151--162},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11818564\_17},
  doi          = {10.1007/11818564\_17},
  timestamp    = {Tue, 14 May 2019 10:00:45 +0200},
  biburl       = {https://dblp.org/rec/conf/prib/WangWCC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/spl/XuanWZA05,
  author       = {Jianhua Xuan and
                  Yue Joseph Wang and
                  Qinfen Zheng and
                  T{\"{u}}lay Adali},
  title        = {Discontinuity-embedded deformable models for surface reconstruction
                  from range images},
  journal      = {{IEEE} Signal Process. Lett.},
  volume       = {12},
  number       = {12},
  pages        = {805--808},
  year         = {2005},
  url          = {https://doi.org/10.1109/LSP.2005.859532},
  doi          = {10.1109/LSP.2005.859532},
  timestamp    = {Thu, 29 Sep 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/spl/XuanWZA05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/XuanHCW05,
  author       = {Jianhua Xuan and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Yue Joseph Wang},
  title        = {Normalization of Microarray Data by Iterative Nonlinear Regression},
  booktitle    = {Fifth {IEEE} International Symposium on Bioinformatic and Bioengineering
                  {(BIBE} 2005), 19-21 October 2005, Minneapolis, MN, {USA}},
  pages        = {267--270},
  publisher    = {{IEEE} Computer Society},
  year         = {2005},
  url          = {https://doi.org/10.1109/BIBE.2005.43},
  doi          = {10.1109/BIBE.2005.43},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibe/XuanHCW05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/ws/05/XuanDKCHW05,
  author       = {Jianhua Xuan and
                  Yibin Dong and
                  Javed I. Khan and
                  Robert Clarke and
                  Eric P. Hoffman and
                  Yue Wang},
  editor       = {Matthew He and
                  Giri Narasimhan and
                  Sergei V. Petoukhov},
  title        = {Gene Selection by Weighted Fisher criterion for Multiclass Prediction},
  booktitle    = {Advances in Bioinformatics and Its Applications},
  series       = {Series in mathematical biology and medicine},
  publisher    = {World Scientific},
  year         = {2005},
  url          = {https://doi.org/10.1142/9789812702098\_0023},
  doi          = {10.1142/9789812702098\_0023},
  timestamp    = {Mon, 06 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/books/ws/05/XuanDKCHW05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/chinaf/ZhangWSW04,
  author       = {Junying Zhang and
                  Defeng Wang and
                  Meihong Shi and
                  Yue Joseph Wang},
  title        = {Output-threshold coupled neural network for solving the shortest path
                  problems},
  journal      = {Sci. China Ser. {F} Inf. Sci.},
  volume       = {47},
  number       = {1},
  pages        = {20--33},
  year         = {2004},
  url          = {https://doi.org/10.1360/02yf0313},
  doi          = {10.1360/02YF0313},
  timestamp    = {Mon, 18 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/chinaf/ZhangWSW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/chinaf/ZhangWKC04,
  author       = {Junying Zhang and
                  Yue Joseph Wang and
                  Javed I. Khan and
                  Robert Clarke},
  title        = {Gene selection in class space for molecular classification of cancer},
  journal      = {Sci. China Ser. {F} Inf. Sci.},
  volume       = {47},
  number       = {3},
  pages        = {301--314},
  year         = {2004},
  url          = {https://doi.org/10.1360/02yf0420},
  doi          = {10.1360/02YF0420},
  timestamp    = {Mon, 18 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/chinaf/ZhangWKC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/vlsisp/SrikanchanaXFNW04,
  author       = {Rujirutana Srikanchana and
                  Jianhua Xuan and
                  Matthew T. Freedman and
                  Charles C. Nguyen and
                  Yue Joseph Wang},
  title        = {Non-Rigid Image Registration by Neural Computation},
  journal      = {J. {VLSI} Signal Process.},
  volume       = {37},
  number       = {2-3},
  pages        = {237--246},
  year         = {2004},
  url          = {https://doi.org/10.1023/B:VLSI.0000027488.23703.ba},
  doi          = {10.1023/B:VLSI.0000027488.23703.BA},
  timestamp    = {Wed, 20 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/vlsisp/SrikanchanaXFNW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iastedCCS/XuanWZA04,
  author       = {Jianhua Xuan and
                  Yue Joseph Wang and
                  Qinfen Zheng and
                  T{\"{u}}lay Adali},
  editor       = {M. H. Rashid},
  title        = {A discontinuity-embedded deformable model for surface modeling},
  booktitle    = {Proceedings of the Second {IASTED} International Conference on Circuits,
                  Signals, and Systems, Clearwater Beach, FL, USA, November 28, 2004
                  - December 1, 2004},
  pages        = {273--277},
  publisher    = {{IASTED/ACTA} Press},
  year         = {2004},
  timestamp    = {Mon, 04 Apr 2011 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iastedCCS/XuanWZA04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/ZhangWMW04,
  author       = {Junying Zhang and
                  Le Wei and
                  Qiguang Miao and
                  Yue Joseph Wang},
  title        = {Image fusion based on non-negative matrix factorization},
  booktitle    = {Proceedings of the 2004 International Conference on Image Processing,
                  {ICIP} 2004, Singapore, October 24-27, 2004},
  pages        = {973--976},
  publisher    = {{IEEE}},
  year         = {2004},
  url          = {https://doi.org/10.1109/ICIP.2004.1419463},
  doi          = {10.1109/ICIP.2004.1419463},
  timestamp    = {Wed, 16 Oct 2019 14:14:52 +0200},
  biburl       = {https://dblp.org/rec/conf/icip/ZhangWMW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpr/XuanDKHCW04,
  author       = {Jianhua Xuan and
                  Yibin Dong and
                  Javed I. Khan and
                  Eric P. Hoffman and
                  Robert Clarke and
                  Yue Joseph Wang},
  title        = {Robust Feature Selection by Weighted Fisher Criterion for Multiclass
                  Prediction in Gene Expression Profiling},
  booktitle    = {17th International Conference on Pattern Recognition, {ICPR} 2004,
                  Cambridge, UK, August 23-26, 2004},
  pages        = {291--294},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/ICPR.2004.1334170},
  doi          = {10.1109/ICPR.2004.1334170},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icpr/XuanDKHCW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/WangSCXS04,
  author       = {Yue Joseph Wang and
                  Rujirutana Srikanchana and
                  Peter L. Choyke and
                  Jianhua Xuan and
                  Zsolt Szabo},
  title        = {Computed Simultaneous Imaging of Multiple Functional Biomarkers},
  booktitle    = {Proceedings of the 2004 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Arlington, VA, USA, 15-18 April 2004},
  pages        = {225--228},
  publisher    = {{IEEE}},
  year         = {2004},
  url          = {https://doi.org/10.1109/ISBI.2004.1398515},
  doi          = {10.1109/ISBI.2004.1398515},
  timestamp    = {Wed, 04 Oct 2023 16:23:55 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/WangSCXS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/HanWLW04,
  author       = {Zhu Han and
                  Z. Jane Wang and
                  K. J. Ray Liu and
                  Yue Joseph Wang},
  title        = {Simultaneous Estimation of Kinetic Parameters and the Input Function
                  from {DCE-MRI} Data: Theory and Simulation},
  booktitle    = {Proceedings of the 2004 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Arlington, VA, USA, 15-18 April 2004},
  pages        = {996--999},
  publisher    = {{IEEE}},
  year         = {2004},
  url          = {https://doi.org/10.1109/ISBI.2004.1398708},
  doi          = {10.1109/ISBI.2004.1398708},
  timestamp    = {Wed, 04 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/HanWLW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/vlsisp/WangWLKZLXKC03,
  author       = {Zuyi Wang and
                  Yue Joseph Wang and
                  Jianping Lu and
                  Sun{-}Yuan Kung and
                  Junying Zhang and
                  Richard Lee and
                  Jianhua Xuan and
                  Javed I. Khan and
                  Robert Clarke},
  title        = {Discriminatory Mining of Gene Expression Microarray Data},
  journal      = {J. {VLSI} Signal Process.},
  volume       = {35},
  number       = {3},
  pages        = {255--272},
  year         = {2003},
  url          = {https://doi.org/10.1023/B:VLSI.0000003024.13494.40},
  doi          = {10.1023/B:VLSI.0000003024.13494.40},
  timestamp    = {Mon, 27 Mar 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/vlsisp/WangWLKZLXKC03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icmcs/WangKZKXW03,
  author       = {Zuyi Wang and
                  Sun{-}Yuan Kung and
                  Junying Zhang and
                  Javed I. Khan and
                  Jianhua Xuan and
                  Yue Joseph Wang},
  title        = {Computational intelligence approach for gene expression data mining
                  and classification},
  booktitle    = {Proceedings of the 2003 {IEEE} International Conference on Multimedia
                  and Expo, {ICME} 2003, 6-9 July 2003, Baltimore, MD, {USA}},
  pages        = {449--452},
  publisher    = {{IEEE} Computer Society},
  year         = {2003},
  url          = {https://doi.org/10.1109/ICME.2003.1221345},
  doi          = {10.1109/ICME.2003.1221345},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icmcs/WangKZKXW03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/XuanFW03,
  author       = {Jianhua Xuan and
                  Matthew T. Freedman and
                  Yue Joseph Wang},
  editor       = {Milan Sonka and
                  J. Michael Fitzpatrick},
  title        = {Finite-element deformable sheet-curve models for registration of breast
                  {MR} images},
  booktitle    = {Medical Imaging 2003: Image Processing, San Diego, California, United
                  States, 15-20 February 2003},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {2003},
  url          = {https://doi.org/10.1117/12.480859},
  doi          = {10.1117/12.480859},
  timestamp    = {Wed, 27 Nov 2024 12:16:28 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/XuanFW03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/ZhangSXCLW03,
  author       = {Junying Zhang and
                  Rujirutana Srikanchana and
                  Jianhua Xuan and
                  Peter L. Choyke and
                  King C. Li and
                  Yue Joseph Wang},
  editor       = {Milan Sonka and
                  J. Michael Fitzpatrick},
  title        = {Partially independent component analysis of tumor heterogeneities
                  by {DCE-MRI}},
  booktitle    = {Medical Imaging 2003: Image Processing, San Diego, California, United
                  States, 15-20 February 2003},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {2003},
  url          = {https://doi.org/10.1117/12.481406},
  doi          = {10.1117/12.481406},
  timestamp    = {Wed, 27 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/ZhangSXCLW03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nnsp/WangZKCG03,
  author       = {Yue Joseph Wang and
                  Junying Zhang and
                  Javed I. Khan and
                  Robert Clarke and
                  Zhiping Gu},
  title        = {Partially-independent component analysis for tissue heterogeneity
                  correction in microarray gene expression analysis},
  booktitle    = {{NNSP} 2003, {IEEE} {XIII} Workshop on Neural Networks for Signal
                  Processing, Toulouse, France, September 17-19, 2003},
  pages        = {23--32},
  publisher    = {{IEEE}},
  year         = {2003},
  url          = {https://doi.org/10.1109/NNSP.2003.1318001},
  doi          = {10.1109/NNSP.2003.1318001},
  timestamp    = {Wed, 16 Oct 2019 14:14:54 +0200},
  biburl       = {https://dblp.org/rec/conf/nnsp/WangZKCG03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nnsp/WangXSZSBCL03,
  author       = {Yue Joseph Wang and
                  Jianhua Xuan and
                  Rujirutana Srikanchana and
                  Junying Zhang and
                  Zsolt Szabo and
                  Zaver M. Bhujwalla and
                  Peter L. Choyke and
                  King C. Li},
  title        = {Computed simultaneous imaging of multiple biomarkers},
  booktitle    = {{NNSP} 2003, {IEEE} {XIII} Workshop on Neural Networks for Signal
                  Processing, Toulouse, France, September 17-19, 2003},
  pages        = {269--278},
  publisher    = {{IEEE}},
  year         = {2003},
  url          = {https://doi.org/10.1109/NNSP.2003.1318026},
  doi          = {10.1109/NNSP.2003.1318026},
  timestamp    = {Thu, 09 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/nnsp/WangXSZSBCL03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tip/WangWM02,
  author       = {Yue Joseph Wang and
                  Kelvin Woods and
                  Maxine A. McClain},
  title        = {Information-theoretic matching of two point sets},
  journal      = {{IEEE} Trans. Image Process.},
  volume       = {11},
  number       = {8},
  pages        = {868--872},
  year         = {2002},
  url          = {https://doi.org/10.1109/TIP.2002.801120},
  doi          = {10.1109/TIP.2002.801120},
  timestamp    = {Sun, 10 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tip/WangWM02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/WangLLGC02,
  author       = {Yue Joseph Wang and
                  Jianping Lu and
                  Richard Lee and
                  Zhiping Gu and
                  Robert Clarke},
  title        = {Iterative normalization of cDNA microarray data},
  journal      = {{IEEE} Trans. Inf. Technol. Biomed.},
  volume       = {6},
  number       = {1},
  pages        = {29--37},
  year         = {2002},
  url          = {https://doi.org/10.1109/4233.992159},
  doi          = {10.1109/4233.992159},
  timestamp    = {Mon, 27 Mar 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/titb/WangLLGC02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/LoLWKF02,
  author       = {Shih{-}Chung Ben Lo and
                  Huai Li and
                  Yue Joseph Wang and
                  Lisa Kinnard and
                  Matthew T. Freedman},
  title        = {A Multiple Circular Paths Convolution Neural Network System for Detection
                  of Mammographic Masses},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {21},
  number       = {2},
  pages        = {150--158},
  year         = {2002},
  url          = {https://doi.org/10.1109/42.993133},
  doi          = {10.1109/42.993133},
  timestamp    = {Thu, 18 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/LoLWKF02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/WangZHKS02,
  author       = {Yue Joseph Wang and
                  Junying Zhang and
                  Kun Huang and
                  Javed I. Khan and
                  Zsolt Szabo},
  title        = {Independent component imaging of disease signatures},
  booktitle    = {Proceedings of the 2002 {IEEE} International Symposium on Biomedical
                  Imaging, Ritz-Carlton Hotel, Washington, DC, USA, 7-10 June 2002},
  pages        = {457--460},
  publisher    = {{IEEE}},
  year         = {2002},
  url          = {https://doi.org/10.1109/ISBI.2002.1029293},
  doi          = {10.1109/ISBI.2002.1029293},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/WangZHKS02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/HuangXVFSHSW02,
  author       = {Kun Huang and
                  Jianhua Xuan and
                  J{\'{o}}zsef Varga and
                  Matthew T. Freedman and
                  Zsolt Szabo and
                  Dan Hayes and
                  Vered Stearns and
                  Yue Joseph Wang},
  editor       = {Milan Sonka and
                  J. Michael Fitzpatrick},
  title        = {MR-image-based tissue analysis and its clinical applications},
  booktitle    = {Medical Imaging 2002: Image Processing, San Diego, California, United
                  States, 23-28 February 2002},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {2002},
  url          = {https://doi.org/10.1117/12.467184},
  doi          = {10.1117/12.467184},
  timestamp    = {Wed, 27 Nov 2024 12:16:31 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/HuangXVFSHSW02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/SrikanchanaXHFW02,
  author       = {Rujirutana Srikanchana and
                  Jianhua Xuan and
                  Kun Huang and
                  Matthew T. Freedman and
                  Yue Joseph Wang},
  editor       = {Milan Sonka and
                  J. Michael Fitzpatrick},
  title        = {Mixture of principal axes registration: a neural computation approach},
  booktitle    = {Medical Imaging 2002: Image Processing, San Diego, California, United
                  States, 23-28 February 2002},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {2002},
  url          = {https://doi.org/10.1117/12.467045},
  doi          = {10.1117/12.467045},
  timestamp    = {Wed, 27 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/SrikanchanaXHFW02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/ZhaoLFW02,
  author       = {Hui Zhao and
                  Shih{-}Chung Benedict Lo and
                  Matthew T. Freedman and
                  Yue Joseph Wang},
  editor       = {Milan Sonka and
                  J. Michael Fitzpatrick},
  title        = {Enhanced lung cancer detection in temporal subtraction chest radiography
                  using directional edge filtering techniques},
  booktitle    = {Medical Imaging 2002: Image Processing, San Diego, California, United
                  States, 23-28 February 2002},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {2002},
  url          = {https://doi.org/10.1117/12.467212},
  doi          = {10.1117/12.467212},
  timestamp    = {Wed, 27 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/ZhaoLFW02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/WangAXS01,
  author       = {Yue Joseph Wang and
                  T{\"{u}}lay Adali and
                  Jianhua Xuan and
                  Zsolt Szabo},
  title        = {Magnetic resonance image analysis by information theoretic criteria
                  and stochastic site models},
  journal      = {{IEEE} Trans. Inf. Technol. Biomed.},
  volume       = {5},
  number       = {2},
  pages        = {150--158},
  year         = {2001},
  url          = {https://doi.org/10.1109/4233.924805},
  doi          = {10.1109/4233.924805},
  timestamp    = {Wed, 13 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/titb/WangAXS01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/LiWLLF01,
  author       = {Huai Li and
                  Yue Joseph Wang and
                  K. J. Ray Liu and
                  Shih{-}Chung Ben Lo and
                  Matthew T. Freedman},
  title        = {Computerized Radiographic Mass Detection - Part {I:} Lesion Site Selection
                  by Morphological Enhancement and Contextual Segmentation},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {20},
  number       = {4},
  pages        = {289--301},
  year         = {2001},
  url          = {https://doi.org/10.1109/42.921478},
  doi          = {10.1109/42.921478},
  timestamp    = {Thu, 18 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/LiWLLF01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/LiWLLF01a,
  author       = {Huai Li and
                  Yue Joseph Wang and
                  K. J. Ray Liu and
                  Shih{-}Chung Ben Lo and
                  Matthew T. Freedman},
  title        = {Computerized Radiographic Mass Detection - Part {II:} Decision Support
                  by Featured Database Visualization and Modular Neural Networks},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {20},
  number       = {4},
  pages        = {302--313},
  year         = {2001},
  url          = {https://doi.org/10.1109/42.921479},
  doi          = {10.1109/42.921479},
  timestamp    = {Thu, 18 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/LiWLLF01a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aipr/SrikanchanaHXFW01,
  author       = {Rujirutana Srikanchana and
                  Kun Huang and
                  Jianhua Xuan and
                  Matthew T. Freedman and
                  Yue Joseph Wang},
  title        = {Mixture of Principal Axes Registration for Change Analysis in Computer-Aided
                  Diagnosis},
  booktitle    = {30th Applied Image Pattern Recognition Workshop {(AIPR} 2001), Analysis
                  and Understanding of Time Varying Imagery, 10-12 October 2001, Washington,
                  DC, USA, Proceedings},
  pages        = {25--31},
  publisher    = {{IEEE} Computer Society},
  year         = {2001},
  url          = {https://doi.org/10.1109/AIPR.2001.991199},
  doi          = {10.1109/AIPR.2001.991199},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aipr/SrikanchanaHXFW01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tnn/WangLFK00,
  author       = {Yue Joseph Wang and
                  Lan Luo and
                  Matthew T. Freedman and
                  Sun{-}Yuan Kung},
  title        = {Probabilistic principal component subspaces: a hierarchical finite
                  mixture model for data visualization},
  journal      = {{IEEE} Trans. Neural Networks Learn. Syst.},
  volume       = {11},
  number       = {3},
  pages        = {625--636},
  year         = {2000},
  url          = {https://doi.org/10.1109/72.846734},
  doi          = {10.1109/72.846734},
  timestamp    = {Mon, 09 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tnn/WangLFK00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aipr/WoodsWFC00,
  author       = {Kelvin Woods and
                  Yue Joseph Wang and
                  Li Fan and
                  Chang Wen Chen},
  title        = {Model Supported Image Registration and Warping for Change Detection
                  in Computer-aided Diagnosis},
  booktitle    = {29th Applied Image Pattern Recognition Workshop {(AIPR} 2000), 16-18
                  October 2000, Washington, DC, USA, Proceedings},
  pages        = {180--186},
  publisher    = {{IEEE} Computer Society},
  year         = {2000},
  url          = {https://doi.org/10.1109/AIPRW.2000.953623},
  doi          = {10.1109/AIPRW.2000.953623},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aipr/WoodsWFC00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/WangWLLF00,
  author       = {Yue Joseph Wang and
                  Zuyi Wang and
                  Lan Luo and
                  Shih{-}Chung Benedict Lo and
                  Matthew T. Freedman},
  editor       = {Kenneth M. Hanson},
  title        = {Computer-based decision support system: visual mapping of featured
                  database in computer-aided diagnosis},
  booktitle    = {Medical Imaging 2000: Image Processing, San Diego, CA, United States,
                  12-18 February 2000},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {2000},
  url          = {https://doi.org/10.1117/12.387618},
  doi          = {10.1117/12.387618},
  timestamp    = {Wed, 27 Nov 2024 12:16:35 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/WangWLLF00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/WoodsMWF00,
  author       = {Kelvin Woods and
                  Maxine A. McClain and
                  Yue Joseph Wang and
                  Matthew T. Freedman},
  editor       = {Kenneth M. Hanson},
  title        = {Patient site model supported change detection},
  booktitle    = {Medical Imaging 2000: Image Processing, San Diego, CA, United States,
                  12-18 February 2000},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {2000},
  url          = {https://doi.org/10.1117/12.387614},
  doi          = {10.1117/12.387614},
  timestamp    = {Wed, 27 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/WoodsMWF00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icra/WangNSGF99,
  author       = {Yue Joseph Wang and
                  Charles C. Nguyen and
                  Rujirutana Srikanchana and
                  Z. Geng and
                  Matthew T. Freedman},
  title        = {Tactile Mapping of Palpable Abnormalities for Breast Cancer Diagnosis},
  booktitle    = {1999 {IEEE} International Conference on Robotics and Automation, Marriott
                  Hotel, Renaissance Center, Detroit, Michigan, USA, May 10-15, 1999,
                  Proceedings},
  pages        = {1305--1309},
  publisher    = {{IEEE} Robotics and Automation Society},
  year         = {1999},
  url          = {https://doi.org/10.1109/ROBOT.1999.772541},
  doi          = {10.1109/ROBOT.1999.772541},
  timestamp    = {Wed, 01 Oct 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/icra/WangNSGF99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/WangLFK99,
  author       = {Yue Joseph Wang and
                  Lan Luo and
                  Matthew T. Freedman and
                  Sun{-}Yuan Kung},
  title        = {Hierarchical probabilistic principal component subspaces for data
                  visualization},
  booktitle    = {International Joint Conference Neural Networks, {IJCNN} 1999, Washington,
                  DC, USA, July 10-16, 1999},
  pages        = {2498--2503},
  publisher    = {{IEEE}},
  year         = {1999},
  url          = {https://doi.org/10.1109/IJCNN.1999.833465},
  doi          = {10.1109/IJCNN.1999.833465},
  timestamp    = {Tue, 10 Aug 2021 14:29:47 +0200},
  biburl       = {https://dblp.org/rec/conf/ijcnn/WangLFK99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/imst/AdaliWG98,
  author       = {T{\"{u}}lay Adali and
                  Yue Joseph Wang and
                  Nidhi Gupta},
  title        = {A blockwise relaxation labeling scheme and its application to edge
                  detection in cardiac {MR} image sequences},
  journal      = {Int. J. Imaging Syst. Technol.},
  volume       = {9},
  number       = {5},
  pages        = {340--350},
  year         = {1998},
  url          = {https://doi.org/10.1002/(SICI)1098-1098(1998)9:5\&\#60;340::AID-IMA4\&\#62;3.0.CO;2-A},
  doi          = {10.1002/(SICI)1098-1098(1998)9:5\&\#60;340::AID-IMA4\&\#62;3.0.CO;2-A},
  timestamp    = {Thu, 18 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/imst/AdaliWG98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tip/WangAKS98,
  author       = {Yue Joseph Wang and
                  T{\"{u}}lay Adali and
                  Sun{-}Yuan Kung and
                  Zsolt Szabo},
  title        = {Quantification and segmentation of brain tissues from {MR} images:
                  a probabilistic neural network approach},
  journal      = {{IEEE} Trans. Image Process.},
  volume       = {7},
  number       = {8},
  pages        = {1165--1181},
  year         = {1998},
  url          = {https://doi.org/10.1109/83.704309},
  doi          = {10.1109/83.704309},
  timestamp    = {Sun, 10 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tip/WangAKS98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tsp/WangLLK98,
  author       = {Yue Joseph Wang and
                  Shang{-}Hung Lin and
                  Huai Li and
                  Sun{-}Yuan Kung},
  title        = {Data mapping by probabilistic modular networks and information-theoretic
                  criteria},
  journal      = {{IEEE} Trans. Signal Process.},
  volume       = {46},
  number       = {12},
  pages        = {3378--3397},
  year         = {1998},
  url          = {https://doi.org/10.1109/78.735311},
  doi          = {10.1109/78.735311},
  timestamp    = {Tue, 10 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tsp/WangLLK98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/vlsisp/WangALK98,
  author       = {Yue Joseph Wang and
                  T{\"{u}}lay Adali and
                  Chi{-}Ming Lau and
                  Sun{-}Yuan Kung},
  title        = {Quantitative Analysis of {MR} Brain Image Sequences by Adaptive Self-Organizing
                  Finite Mixtures},
  journal      = {J. {VLSI} Signal Process.},
  volume       = {18},
  number       = {3},
  pages        = {219--239},
  year         = {1998},
  url          = {https://doi.org/10.1023/A:1007985130296},
  doi          = {10.1023/A:1007985130296},
  timestamp    = {Wed, 20 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/vlsisp/WangALK98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XuanWSMM98,
  author       = {Jianhua Xuan and
                  Yue Joseph Wang and
                  Isabell A. Sesterhenn and
                  Judd W. Moul and
                  Seong Ki Mun},
  editor       = {William M. Wells III and
                  Alan C. F. Colchester and
                  Scott L. Delp},
  title        = {3-D Model Supported Prostrate Biopsy Simulation and Evaluation},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - MICCAI'98,
                  First International Conference, Cambridge, MA, USA, October 11-13,
                  1998, Proceedings},
  series       = {Lecture Notes in Computer Science},
  pages        = {358--367},
  publisher    = {Springer},
  year         = {1998},
  url          = {https://doi.org/10.1007/BFb0056220},
  doi          = {10.1007/BFB0056220},
  timestamp    = {Tue, 14 May 2019 10:00:50 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/XuanWSMM98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/LoLHWFM98,
  author       = {Shih{-}Chung Benedict Lo and
                  Huai Li and
                  Akira Hasegawa and
                  Yue Joseph Wang and
                  Matthew T. Freedman and
                  Seong Ki Mun},
  editor       = {Kenneth M. Hanson},
  title        = {Detection of mammographic masses using sector features with a multiple-circular-path
                  neural network},
  booktitle    = {Medical Imaging 1998: Image Processing, San Diego, CA, United States,
                  21-26 February 1998},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {1998},
  url          = {https://doi.org/10.1117/12.310848},
  doi          = {10.1117/12.310848},
  timestamp    = {Wed, 27 Nov 2024 12:16:39 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/LoLHWFM98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/XuanWAZ97,
  author       = {Jianhua Xuan and
                  Yue Joseph Wang and
                  T{\"{u}}lay Adali and
                  Qinfen Zheng},
  title        = {A Deformable Surface-Spine Model for 3-D Surface Registration},
  booktitle    = {Proceedings 1997 International Conference on Image Processing, {ICIP}
                  '97, Santa Barbara, California, USA, October 26-29, 1997},
  pages        = {236--239},
  publisher    = {{IEEE} Computer Society},
  year         = {1997},
  url          = {https://doi.org/10.1109/ICIP.1997.632072},
  doi          = {10.1109/ICIP.1997.632072},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icip/XuanWAZ97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/LiLLW97,
  author       = {Huai Li and
                  K. J. Ray Liu and
                  Shih{-}Chung Ben Lo and
                  Yue Joseph Wang},
  title        = {Stochastic Model and Probabilistic Decision-Based Calssifier for Mass
                  Detection in Digital Mammography},
  booktitle    = {Proceedings 1997 International Conference on Image Processing, {ICIP}
                  '97, Santa Barbara, California, USA, October 26-29, 1997},
  pages        = {539--542},
  publisher    = {{IEEE} Computer Society},
  year         = {1997},
  url          = {https://doi.org/10.1109/ICIP.1997.632177},
  doi          = {10.1109/ICIP.1997.632177},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icip/LiLLW97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/WangLXLM97,
  author       = {Yue Joseph Wang and
                  Huao Li and
                  Jianhua Xuan and
                  Shih{-}Chung Ben Lo and
                  Seong Ki Mun},
  title        = {Modeling of Wavelet Coefficients in Medical Image Compression},
  booktitle    = {Proceedings 1997 International Conference on Image Processing, {ICIP}
                  '97, Santa Barbara, California, USA, October 26-29, 1997},
  pages        = {644--647},
  publisher    = {{IEEE} Computer Society},
  year         = {1997},
  url          = {https://doi.org/10.1109/ICIP.1997.647995},
  doi          = {10.1109/ICIP.1997.647995},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icip/WangLXLM97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icra/0002WFM97,
  author       = {Jianchao Zeng and
                  Yue Joseph Wang and
                  Matthew T. Freedman and
                  Seong Ki Mun},
  title        = {Color-feature-based finger tracking for breast palpation quantification},
  booktitle    = {Proceedings of the 1997 {IEEE} International Conference on Robotics
                  and Automation, Albuquerque, New Mexico, USA, April 20-25, 1997},
  pages        = {2565--2570},
  publisher    = {{IEEE}},
  year         = {1997},
  url          = {https://doi.org/10.1109/ROBOT.1997.619347},
  doi          = {10.1109/ROBOT.1997.619347},
  timestamp    = {Fri, 13 Aug 2021 09:26:01 +0200},
  biburl       = {https://dblp.org/rec/conf/icra/0002WFM97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/0002WFM97,
  author       = {Jianchao Zeng and
                  Yue Joseph Wang and
                  Matthew T. Freedman and
                  Seong Ki Mun},
  editor       = {Yongmin Kim},
  title        = {Stereo-vision system for finger tracking in breast self-examination},
  booktitle    = {Medical Imaging 1997: Image Display, Newport Beach, CA, United States,
                  22-28 February 1997},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {1997},
  url          = {https://doi.org/10.1117/12.273888},
  doi          = {10.1117/12.273888},
  timestamp    = {Wed, 27 Nov 2024 12:16:41 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/0002WFM97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/LoXLWFM97,
  author       = {Shih{-}Chung Benedict Lo and
                  Jianhua Xuan and
                  Huai Li and
                  Yue Joseph Wang and
                  Matthew T. Freedman and
                  Seong Ki Mun},
  editor       = {Yongmin Kim},
  title        = {Dyadic decomposition: a unified perspective on predictive, subband,
                  and wavelet transforms},
  booktitle    = {Medical Imaging 1997: Image Display, Newport Beach, CA, United States,
                  22-28 February 1997},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {1997},
  url          = {https://doi.org/10.1117/12.273906},
  doi          = {10.1117/12.273906},
  timestamp    = {Wed, 27 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/LoXLWFM97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/WangXSHELM97,
  author       = {Yue Joseph Wang and
                  Jianhua Xuan and
                  Isabell A. Sesterhenn and
                  Wendelin S. Hayes and
                  David S. Ebert and
                  John H. Lynch and
                  Seong Ki Mun},
  editor       = {Yongmin Kim},
  title        = {Statistical modeling and visualization of localized prostate cancer},
  booktitle    = {Medical Imaging 1997: Image Display, Newport Beach, CA, United States,
                  22-28 February 1997},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {1997},
  url          = {https://doi.org/10.1117/12.273958},
  doi          = {10.1117/12.273958},
  timestamp    = {Wed, 27 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/WangXSHELM97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/XuanSHWAYFM97,
  author       = {Jianhua Xuan and
                  Isabell A. Sesterhenn and
                  Wendelin S. Hayes and
                  Yue Joseph Wang and
                  T{\"{u}}lay Adali and
                  Yukako Yagi and
                  Matthew T. Freedman and
                  Seong Ki Mun},
  editor       = {Yongmin Kim},
  title        = {Surface reconstruction and visualization of the surgical prostate
                  model},
  booktitle    = {Medical Imaging 1997: Image Display, Newport Beach, CA, United States,
                  22-28 February 1997},
  series       = {{SPIE} Proceedings},
  publisher    = {{SPIE}},
  year         = {1997},
  url          = {https://doi.org/10.1117/12.273939},
  doi          = {10.1117/12.273939},
  timestamp    = {Wed, 27 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/XuanSHWAYFM97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eusipco/XuanASW96,
  author       = {Jianhua Xuan and
                  Tiilay Adah and
                  Eliot L. Siegel and
                  Yue Wang},
  title        = {Image quality evaluation for radiation dose optimization in {CR} by
                  shape and wavelet analyses},
  booktitle    = {8th European Signal Processing Conference, {EUSIPCO} 1996, Trieste,
                  Italy, 10-13 September, 1996},
  pages        = {1--4},
  publisher    = {{IEEE}},
  year         = {1996},
  url          = {https://ieeexplore.ieee.org/document/7083086/},
  timestamp    = {Mon, 06 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/eusipco/XuanASW96.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icassp/WangA96,
  author       = {Yue Joseph Wang and
                  T{\"{u}}lay Adali},
  title        = {Efficient learning of standard finite normal mixtures for image quantification},
  booktitle    = {1996 {IEEE} International Conference on Acoustics, Speech, and Signal
                  Processing Conference Proceedings, {ICASSP} '96, Atlanta, Georgia,
                  USA, May 7-10, 1996},
  pages        = {3422--3425},
  publisher    = {{IEEE} Computer Society},
  year         = {1996},
  url          = {https://doi.org/10.1109/ICASSP.1996.550613},
  doi          = {10.1109/ICASSP.1996.550613},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icassp/WangA96.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/XuanAW95,
  author       = {Jianhua Xuan and
                  T{\"{u}}lay Adali and
                  Yue Joseph Wang},
  title        = {Segmentation of magnetic resonance brain image: integrating region
                  growing and edge detection},
  booktitle    = {Proceedings 1995 International Conference on Image Processing, Washington,
                  DC, USA, October 23-26, 1995},
  pages        = {544--547},
  publisher    = {{IEEE} Computer Society},
  year         = {1995},
  url          = {https://doi.org/10.1109/ICIP.1995.537692},
  doi          = {10.1109/ICIP.1995.537692},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icip/XuanAW95.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/AdaliW94,
  author       = {T{\"{u}}lay Adali and
                  Yue Joseph Wang},
  title        = {Probabilistic Neural Networks for Medical Image Quantification},
  booktitle    = {Proceedings 1994 International Conference on Image Processing, Austin,
                  Texas, USA, November 13-16, 1994},
  pages        = {889--892},
  publisher    = {{IEEE} Computer Society},
  year         = {1994},
  url          = {https://doi.org/10.1109/ICIP.1994.413718},
  doi          = {10.1109/ICIP.1994.413718},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icip/AdaliW94.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}