• case-insensitive prefix search: default
  e.g., sig matches "SIGIR" as well as "signal"
• exact word search: append dollar sign ($) to word
  e.g., graph$ matches "graph", but not "graphics"
• boolean and: separate words by space
  e.g., codd model
• boolean or: connect words by pipe symbol (|)
  e.g., graph|network

Update May 7, 2017: Please note that we had to disable the phrase search operator (.) and the boolean not operator (-) due to technical problems. For the time being, phrase search queries will yield regular prefix search result, and search terms preceded by a minus will be interpreted as regular (positive) search terms.

found 44 matches

• 2022
• 
  Terence P. Speed, Damien G. Hicks:
  Spectral PCA for MANOVA and data over binary trees. J. Multivar. Anal. 188: 104905 (2022)
• 2020
• 
  Anna Quaglieri, Christoffer Flensburg, Terence P. Speed, Ian J. Majewski:
  Finding a suitable library size to call variants in RNA-Seq. BMC Bioinform. 21(1): 553 (2020)
• 2019
• 
  Timothy J. Peters, Hugh J. French, Stephen T. Bradford, Ruth Pidsley, Clare Stirzaker, Hilal Varinli, Shalima Nair, Wenjia Qu, Jenny Song, Katherine A. Giles, Aaron L. Statham, Helen Speirs, Terence P. Speed, Susan J. Clark:
  Evaluation of cross-platform and interlaboratory concordance via consensus modelling of genomic measurements. Bioinform. 35(4): 560-570 (2019)
• 
  Chengzhong Ye, Terence P. Speed, Agus Salim:
  DECENT: differential expression with capture efficiency adjustmeNT for single-cell RNA-seq data. Bioinform. 35(24): 5155-5162 (2019)
• 
  Damien G. Hicks, Terence P. Speed, Mohammed Yassin, Sarah M. Russell:
  Maps of variability in cell lineage trees. PLoS Comput. Biol. 15(2) (2019)
• 2015
• 
  Saskia Freytag, Johann Gagnon-Bartsch, Terence P. Speed, Melanie Bahlo:
  Systematic noise degrades gene co-expression signals but can be corrected. BMC Bioinform. 16: 309:1-309:17 (2015)
• 2014
• 
  Su Yeon Kim, Laurent Jacob, Terence P. Speed:
  Combining calls from multiple somatic mutation-callers. BMC Bioinform. 15: 154 (2014)
• 2013
• 
  Su Yeon Kim, Terence P. Speed:
  Comparing somatic mutation-callers: Beyond Venn diagrams. BMC Bioinform. 14: 189 (2013)
• 2012
• 
  Steven M. Hill, Yiling Lu, Jennifer Molina, Laura Heiser, Paul T. Spellman, Terence P. Speed, Joe W. Gray, Gordon B. Mills, Sach Mukherjee:
  Bayesian Inference of Signaling Network Topology in a Cancer Cell Line. Bioinform. 28(21): 2804-2810 (2012)
• 
  Nianxiang Zhang, Yan Xu, Martin O'Hely, Terence P. Speed, Curt Scharfe, Wenyi Wang:
  SRMA: an R package for resequencing array data analysis. Bioinform. 28(14): 1928-1930 (2012)
• 2011
• 
  Ben J. Woodcroft, Robert Radloff, Lee M. Yeoh, Kristie-Lee Scanlon, Maria A. Doyle, Giel G. van Dooren, Geoffrey I. McFadden, Christopher J. Tonkin, Terence P. Speed, Stuart A. Ralph:
  An integrative bioinformatic predictor of protein sub-cellular localisation in malaria. BMC Bioinform. 12(S-11): A6 (2011)
• 
  Wenyi Wang, Peidong Shen, Sreedevi Thiyagarajan, Shengrong Lin, Curtis J. Palm, Rita Horvath, Thomas Klopstock, David Cutler, Lynn Pique, Iris Schrijver, Ronald W. Davis, Michael Mindrinos, Terence P. Speed, Curt Scharfe:
  Identification of rare DNA variants in mitochondrial disorders with improved array-based sequencing. Nucleic Acids Res. 39(1): 44-58 (2011)
• 2010
• 
  Henrik Bengtsson, Pierre Neuvial, Terence P. Speed:
  TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays. BMC Bioinform. 11: 245 (2010)
• 
  Doron Lipson, Terence P. Speed, Margaret Taub:
  Methods for Allocating Ambiguous Short-reads. Commun. Inf. Syst. 10(2): 69-82 (2010)
• 2009
• 
  Henrik Bengtsson, Amrita Ray, Paul T. Spellman, Terence P. Speed:
  A single-sample method for normalizing and combining full-resolution copy numbers from multiple platforms, labs and analysis methods. Bioinform. 25(7): 861-867 (2009)
• 
  Henrik Bengtsson, Pratyaksha Wirapati, Terence P. Speed:
  A single-array preprocessing method for estimating full-resolution raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP 5 & 6. Bioinform. 25(17): 2149-2156 (2009)
• 
  Sach Mukherjee, Steven Pelech, Richard M. Neve, Wen-Lin Kuo, Safiyyah Ziyad, Paul T. Spellman, Joe W. Gray, Terence P. Speed:
  Sparse combinatorial inference with an application in cancer biology. Bioinform. 25(2): 265-271 (2009)
• 
  Mark D. Robinson, Terence P. Speed:
  Differential splicing using whole-transcript microarrays. BMC Bioinform. 10 (2009)
• 
  Yunxia Sui, Xiaoyue Zhao, Terence P. Speed, Zhijin Wu:
  Background Adjustment for DNA Microarrays Using a Database of Microarray Experiments. J. Comput. Biol. 16(11): 1501-1515 (2009)
• 2008
• 
  Henrik Bengtsson, Rafael A. Irizarry, Benilton S. Carvalho, Terence P. Speed:
  Estimation and assessment of raw copy numbers at the single locus level. Bioinform. 24(6): 759-767 (2008)
• 
  E. Purdom, Ken M. Simpson, Mark D. Robinson, J. G. Conboy, A. V. Lapuk, Terence P. Speed:
  FIRMA: a method for detection of alternative splicing from exon array data. Bioinform. 24(15): 1707-1714 (2008)
• 
  Julia Brettschneider, François Collin, Benjamin M. Bolstad, Terence P. Speed:
  Quality Assessment for Short Oligonucleotide Microarray Data. Technometrics 50(3): 241-264 (2008)
• 
  Julia Brettschneider, François Collin, Benjamin M. Bolstad, Terence P. Speed:
  Rejoinder. Technometrics 50(3): 279-283 (2008)
• 2007
• 
  Mark D. Robinson, Terence P. Speed:
  A comparison of Affymetrix gene expression arrays. BMC Bioinform. 8 (2007)
• 
  Mark D. Robinson, David P. De Souza, Woon Wai Keen, Eleanor C. Saunders, Malcolm J. McConville, Terence P. Speed, Vladimir A. Likic:
  A dynamic programming approach for the alignment of signal peaks in multiple gas chromatography-mass spectrometry experiments. BMC Bioinform. 8 (2007)
• 
  Terence P. Speed, Haiyan Huang:
  Research in Computational Molecular Biology, 11th Annual International Conference, RECOMB 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings. Lecture Notes in Computer Science 4453, Springer 2007, ISBN 3-540-71680-7 [contents]
• 2006
• 
  Nusrat Rabbee, Terence P. Speed:
  A genotype calling algorithm for affymetrix SNP arrays. Bioinform. 22(1): 7-12 (2006)
• 2005
• 
  Xiaoyue Zhao, Haiyan Huang, Terence P. Speed:
  Finding Short DNA Motifs Using Permuted Markov Models. J. Comput. Biol. 12(6): 894-906 (2005)
• 
  Tim Beißbarth, Jason A. Tye-Din, Gordon K. Smyth, Terence P. Speed, Robert P. Anderson:
  A systematic approach for comprehensive T-cell epitope discovery using peptide libraries. ISMB (Supplement of Bioinformatics) 2005: 29-37
• 2004
• 
  Leslie Cope, Rafael A. Irizarry, Harris A. Jaffee, Zhijin Wu, Terence P. Speed:
  A benchmark for Affymetrix GeneChip expression measures. Bioinform. 20(3): 323-331 (2004)

skipping 14 more matches