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CRI 2017: San Francisco, CA, USA
- Summit on Clinical Research Informatics, CRI 2017, San Francisco, CA, USA, March 27-30, 2017. AMIA 2017
Panel
- Lauren B. Becnel, Samuel L. Volchenboum, Stephen Arneric, Brendan Delaney, Amy Harris Nordo:
Impacts of CDISC (Clinical Data Interchange Standards Consortium) Standards on Clinical and Translational Research, Drug Development Tools and Learning Health Systems. - Elise Berliner, Richard Gliklich:
Harmonizing Outcome Measures to Increase the Utility of Patient Registries: A Case Study in Atrial Fibrillation. - Jeffrey S. Brown, Robert Ball, David S. Carrell, Leonard W. D'Avolio, Keith Marsolo:
Is an Algorithm Just an Algorithm? How to Define Clinical Concepts for Use in Comparative Safety and Effectiveness Distributed Research Networks. - Michael Cantor, Peter J. Embí, Allen Hsiao:
Developing Governance Structures for Informatics Approaches to Research Recruitment. - Lesley H. Curtis, Jessica L. Sturtevant, Jon Puro, Kathleen McTigue, Hozefa Divan:
Distributed querying across PCORnet: Early lessons. - Jeffrey G. Klann, Daniella Meeker, Marc B. Rosenman, Shawn N. Murphy:
Data Fitness-for-Use: A Method to Maximize Utility of Poor-Quality Data? - Boyd M. Knosp, William K. Barnett, Peter J. Embí, Nick R. Anderson:
Maturity Models for Research IT and Informatics - Reports from the Field. - Leon Rozenblit, Piper Ranallo, David E. Stark, Thomas H. McCoy, Jessica D. Tenenbaum:
Mental Health Informatics Panel. - Qing T. Zeng, Joseph L. Goulet, Nell J. Marshall, Craig A. Morioka:
Integrative Health Informatics: The VHA Experience.
Paper
- Naveed Afzal, Sunghwan Sohn, Christopher Scott, Hongfang Liu, Iftikhar J. Kullo, Adelaide M. Arruda-Olson:
Surveillance of Peripheral Arterial Disease Cases Using Natural Language Processing of Clinical Notes. - Vibha Anand, Amos Cahan, Soumya Ghosh:
Clinical Trials.Gov: A Topical Analyses. - Juan M. Banda, Yoni Halpern, David A. Sontag, Nigam Shah:
Electronic phenotyping with APHRODITE and the Observational Health Sciences and Informatics (OHDSI) data network. - Justin J. Baraboo, Deendayal Dinakarpandian, Sherwin Chan:
Automated Prediction of Hepatic Arterial Stenosis. - Taxiarchis Botsis, Matthew Foster, Kory Kreimeyer, Abhishek Pandey, Richard Forshee:
Monitoring biomedical literature for post-market safety purposes by analyzing networks of text-based coded information. - Thomas R. Campion Jr., Evan Sholle, Marcos Davila:
Generalizable Middleware to Support Use of REDCap Dynamic Data Pull for Integrating Clinical and Research Data. - Marzyeh Ghassemi, Mike Wu, Michael C. Hughes, Peter Szolovits, Finale Doshi-Velez:
Predicting intervention onset in the ICU with switching state space models. - Soumya Ghosh, Zhaonan Sun, Ying Li, Yu Cheng, Amrita Mohan, Cristina Sampaio, Jianying Hu:
An Exploration of Latent Structure in Observational Huntington's Disease Studies. - Robert J. Goodloe, Eric Farber-Eger, Jonathan Boston, Dana C. Crawford, William S. Bush:
Reducing Clinical Noise for Body Mass Index Measures Due to Unit and Transcription Errors in the Electronic Health Record. - Travis R. Goodwin, Sanda M. Harabagiu:
Deep Learning from EEG Reports for Inferring Underspecified Information. - Shijing Guo, Xiang Li, Haifeng Liu, Ping Zhang, Xin Du, Guotong Xie, Fei Wang:
Integrating Temporal Pattern Mining in Ischemic Stroke Prediction and Treatment Pathway Discovery for Atrial Fibrillation. - Snehil Gupta, Connie Zabarovskaya, Brian Romine, Daniel Vianello, Cynthia Vitale, Leslie D. McIntosh:
Incorporating Data Citation in a Biomedical Repository: An Implementation Use Case. - Daniel R. Harris, Ramakanth Kavuluru, Jerzy W. Jaromczyk, Todd R. Johnson:
Rapid and Reusable Text Visualization and Exploration Development with DELVE. - Jette Henderson, Ryan Bridges, Joyce C. Ho, Byron C. Wallace, Joydeep Ghosh:
PheKnow-Cloud: A Tool for Evaluating High-Throughput Phenotype Candidates using Online Medical Literature. - Sam Hume, Surendra Sarnikar, Lauren B. Becnel, Dorine Bennett:
Visualizing and Validating Metadata Traceability within the CDISC Standards. - Finn Kuusisto, John W. Steill, Zhaobin Kuang, James A. Thomson, David Page, Ron M. Stewart:
A Simple Text Mining Approach for Ranking Pairwise Associations in Biomedical Applications. - Chia-Ju Lee, Beth Devine, Peter Tarczy-Hornoch:
A Knowledge-based System for Intelligent Support in Pharmacogenomics Evidence Assessment: Ontology-driven Evidence Representation and Retrieval. - Hee-Jin Lee, Min Jiang, Yonghui Wu, Christian Shaffer, John H. Cleator, Eitan Friedman, Joshua P. Lewis, Dan M. Roden, Joshua C. Denny, Hua Xu:
A comparative study of different methods for automatic identification of clopidogrel-induced bleedings in electronic health records. - Xiangrui Li, Dongxiao Zhu, Ming Dong, Milad Zafar Nezhad, Alexander T. Janke, Phillip Levy:
SDT: A Tree Method for Detecting Patient Subgroups with Personalized Risk Factors. - Jennifer J. Liang, Ching-Huei Tsou, Murthy V. Devarakonda:
Ground Truth Creation for Complex Clinical NLP Tasks - an Iterative Vetting Approach and Lessons Learned. - Mei Liu, Brittany L. Melton, Gregory A. Ator, L. Russell Waitman:
Integrating Medication Alert Data into a Clinical Data Repository to Enable Retrospective Study of Drug Interaction Alerts in Clinical Practice. - Sijia Liu, Liwei Wang, Donna M. Ihrke, Vipin Chaudhary, Cui Tao, Chunhua Weng, Hongfang Liu:
Correlating Lab Test Results in Clinical Notes with Structured Lab Data: A Case Study in HbA1c and Glucose. - Ramón Maldonado, Travis R. Goodwin, Sanda M. Harabagiu:
Active Deep Learning-Based Annotation of Electroencephalography Reports for Cohort Identification. - Sonali Parbhoo, Jasmina Bogojeska, Maurizio Zazzi, Volker Roth, Finale Doshi-Velez:
Combining Kernel and Model Based Learning for HIV Therapy Selection. - John M. Prager, Jennifer J. Liang, Murthy V. Devarakonda:
SemanticFind: Locating What You Want in a Patient Record, Not Just What You Ask For. - Deepak K. Sharma, Harold R. Solbrig, Eric Prud'hommeaux, Kathleen Lee, Jyotishman Pathak, Guoqian Jiang:
D2Refine: A Platform for Clinical Research Study Data Element Harmonization and Standardization. - Ergin Soysal, Jeremy L. Warner, Joshua C. Denny, Hua Xu:
Identifying Metastases related Information from Pathology Reports of Lung Cancer Patients. - Shiqiang Tao, Ningzhou Zeng, Xi Wu, Wei Zhu, Xiaojin Li, Licong Cui, Guo-Qiang Zhang:
A Data Capture Framework for Large-scale Interventional Studies with Survey Workflow Management. - Teeradache Viangteeravat, Oguz Akbilgic, Robert L. Davis:
Analyzing Electronic Medical Records to Predict Risk of DIT (Death, Intubation, or Transfer to ICU) in Pediatric Respiratory Failure or Related Conditions. - Roxanne Wadia, Mark A. Shifman, Forrest W. Levin, Luis N. Marenco, Cynthia Brandt, Kei-Hoi Cheung, Tamar H. Taddei, Michael Krauthammer:
A Clinical Decision Support System for Monitoring Post-Colonoscopy Patient Follow-Up and Scheduling. - Kavishwar B. Wagholikar, Rahul Jain, Eliel Oliveira, Joshua C. Mandel, Jeffrey G. Klann, Ricardo Colas, Prasad Patil, Kuladip Yadav, Kenneth D. Mandl, Shawn N. Murphy:
Evolving Research Data Sharing Networks to Clinical App Sharing Networks.
Podium Abstract
- Muthuraman Alagappan, Mary K. Goldstein, Steven M. Asch, Russ B. Altman, Jonathan H. Chen:
Decaying Relevance of Clinical Data when Predicting Future Decisions. - Adelaide M. Arruda-Olson, Naveed Afzal, Homam Moussa Pacha, Ahmad Said, Bradley Lewis, Christopher Scott, Kent Bailey, Hongfang Liu, Iftikhar J. Kullo:
Mortality Prognostic Model for Peripheral Arterial Disease. - Nick Benik, Katy Börner, Nick Brown, Daniel Halsey, Daniel O'Donnell, Griffin M. Weber:
Visualizing healthcare system dynamics in biomedical Big Data. - Ania Berchuck, Michael G. Kahn, Shelley A. Rusincovitch, Daniella Meeker, Shawn N. Murphy, Ravi Bhosale, Keith Marsolo, Michael E. Matheny, L. Russell Waitman, Rachel Hess:
Strategic Assessment and Planning for the PCORnet Common Data Model. - Yulia Bushmanova, Jalpa Patel, Laura Wimbiscus Yoon, Kelsey Marie Richey, Anna Huskin, Matthew Baumann, Paul Friedman, Michael J. Gurley, Samer Sharba, Abby Cosentino-Boehm, Justin Starren, Firas H. Wehbe:
The Design and Implementation of StudyBudget: A Module for Preparing and Tracking Clinical Research Budgets and Costs. - Walter S. Campbell, Daniel Karlsson, Audrey Lazenby, Geoffrey Talmon, James R. Campbell:
SNOMED CT for structured, computable cancer synoptic reporting. - Rajan Chandras, Julia Xu, Swetha Nukala, Christina DaSilva, Jonathan Weider, Martha J. Radford:
Early Successes with Reference Data Governance at an Academic Medical Center. - Robert M. Cronin, Rebecca N. Jerome, Brandy Mapes, Kathryn Goggins, Ken Wallston, Katharine Donato, Mick P. Couper, Michael R. Elliott, Charles P. Mouton, Kemberlee Bonnet, Ezer Benaim, Jordan Sinclair, Peter Speltz, Elliot M. Fielstein, Jill M. Pulley, Sunil Kripalani, David Schlundt, Joshua C. Denny:
Development and Testing of Participant Provided Information Modules for the Precision Medicine Initiative. - Jingcheng Du, Jun Xu, Hsing-yi Song, Cui Tao:
Leveraging Machine Learning Based Approaches to Assess Human Papillomavirus Vaccination Sentiment Trends with Twitter. - Patrick Eads, Craig H. Ganoe, Rodney Jacobson, Tracy Onega, Steven B. Andrews, Nishant Kumar, Brian G. Levin, John H. Higgins:
Developing a Method of Transferring Healthcare Research Data from Data Broker to Researcher: Interactive Secure Institutional Data Release Overseer (ISIDRO). - Hossein Estiri, Kari A. Stephens, Jeffrey G. Klann, Shawn N. Murphy:
Exploring Completeness in Clinical Data Research Networks with DQe-c. - Jung-wei Fan, Jianrong Li, Yves A. Lussier:
Graph-based Clustering of ICD-10 Codes with Alternative Semantic Contexts. - Andriy Fedorov, Daniel L. Rubin, David A. Clunie, Steve Pieper, Ron Kikinis:
Standardized communications of quantitative image analysis results using DICOM: Establishing interoperability through outreach and community engagement. - Gregory P. Finley, Benjamin C. Knoll, Hongfang Liu, Hua Xu, Genevieve B. Melton, Serguei V. S. Pakhomov:
Using ensembles of NLP engines without a common type system to improve abbreviation disambiguation. - Jennifer H. Garvin, Megha Kalsy, Cynthia Brandt, Stephen Luther, Guy Divita, Gregorio Coronado, Douglas Redd, Qing T. Zeng:
An Evolving Ecosystem for Natural Language Processing in Department of Veterans Affairs. - Benjamin Alan Goldstein, Matthew Phelan, Nrupen Bhavsar:
Informed Presence Bias in the Analysis of Electronic Health Records. - William R. Haslett, Craig H. Ganoe, Steven B. Andrews, Rebecca Faill:
Engage: An Open Source, Automated Clinical Trial Awareness Tool. - Andrew Howland, Philip Beineke, Patricia Allen:
Automated Mapping of Concomitant Medication Verbatims to WHO Drug Dictionary Drug Codes with Naïve Bayes Classification. - William Hsu, Frank Meng, Panayiotis Petousis, Weixia Yu, Alex A. T. Bui:
A Web-based Platform for Evaluating and Disseminating Predictive Models. - Gretchen M. Hultman, Reed McEwan, Serguei V. S. Pakhomov, Steven J. Skube, Genevieve B. Melton:
Usability Testing of a Clinical Document Search Engine for Researchers. - Xiaoqian Jiang, Claudiu Farcas, Benedict Paten, Mark Diekhans, Paul Avillach, Wallace Wadge, David Haussler, Lucila Ohno-Machado, Ida Sim:
Count Everything: Secure Count Query Framework Across Big Data Centers. - Steven G. Johnson, Lisiane Pruinelli, Beverly Christie, Connie White-Delaney, Grace Gao, Anne LaFlamme, Jung In Park, Suzan G. Sherman, Bonnie L. Westra:
FloMap: A Collaborative Tool for Mapping Local EHR Flowsheet Data to Information Models. - Ritu Khare, Hanieh Razzaghi, Levon Utidjian, Matt Miller, Charles Bailey:
Understanding the gaps between Data Quality Checks and Research Capabilities in a Pediatric Data Research Network. - Jeffrey G. Klann, Vijay A. Raghavan, Chunhua Weng, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
Needs-Driven Data Completeness Assessment for Clinical Research. - Kristin M. Lenoir, Michael Horvath, Brian Ostasiewski, Wendell Futrell, Brian Wells:
Supplementing Electronic Health Records with Census Data to support Clinical Research Informatics. - Ron C. Li, Lisa Shieh, Gomathi Krishnan, Daniel Z. Fang, Jonathan H. Chen:
Problem based charting: a method for improving problem list utilization and completeness. - Kun Lin, Ping Zhang, Gigi Y. Yuen-Reed, Ying Li, Jianying Hu:
Improving predictive models with clustered sequences: An Application on Heart Failure Risk Prediction. - Elizabeth A. Lindemann, Elizabeth S. Chen, Sripriya Rajamani, Nivedha Manohar, Yan Wang, Genevieve B. Melton:
Representation of Occupation Information in Clinical Texts: An Analysis of Free-Text Clinical Documentation in Multiple Sources. - Anoop M. Mayampurath, Dana P. Edelson, Michael D. Howell, Matthew M. Churpek, Samuel L. Volchenboum:
A Deeper Exploration of Contagious Risk and the Neighborhood Effect. - Tamara M. McMahon, Matthew C. Hoag, Rachel Gyore, Gregory A. Ator, Robert Spaniol, Russ Waitman:
A Method for Adjudicating De-Identification of Free-Text Notes that Provides Auditability and Collaboration with Health Systems. - Stéphane M. Meystre, Youngjun Kim, Glenn T. Gobbel, Michael E. Matheny, Andrew Redd, Bruce E. Bray, Jennifer H. Garvin:
Heart Failure Data for Patient Treatment Goals at the Point of Care: Automated Data Extraction and Consistent Reference Standard Importance. - Craig B. Monsen, Yoni Dvorkis, Sanjukta Pal, Christine Larish:
A real-time predictive model for identifying high need, high cost patients for population health management. - Shawn N. Murphy, Christopher D. Herrick, Michael Mendis, Lori C. Phillips, Wayne Chan, Alyssa J. Porter, Griffin M. Weber, Susanne E. Churchill, Isaac S. Kohane:
Creating a Patient Information Commons from Multiple Research Informatics Platforms. - Radhakrishnan Nagarajan, Jeffery C. Talbert:
Network Abstractions of Prescription Patterns in a Medicaid Population. - Jay G. Pedersen, Bret J. Gardner, Walter S. Campbell, James R. Campbell, James C. McClay:
Deployment of ONC standard terminologies within an i2b2 data warehouse. - Fernanda Polubriaginof, Kayla Quinnies, Rami Vanguri, Alexandre Yahi, Mary Simmerling, Iuliana Ionita-Laza, Hojjat Salmasian, Suzanne Bakken, George Hripcsak, Krzysztof Kiryluk, David Goldstein, Nicholas P. Tatonetti, David K. Vawdrey:
Automated Identification of Families in Electronic Health Records to Support Clinical Research. - Eric Prud'hommeaux, Harold R. Solbrig, Guoqian Jiang:
ShEx, RDF and FHIR. - Satyajeet Raje, Olivier Bodenreider:
Investigating the Coverage of Diseases across Biomedical Research and Clinical Ontologies. - Beatriz Ryan, Lisa V. Grossman, Fernanda Polubriaginof, David K. Vawdrey:
How Do Hospital Patients Engage with a Tablet-based Health Portal? - Alejandro Schuler, David A. Wulf, Yun Lu, Jennifer M. Baker, Gabriel J. Escobar, Nigam Shah, Vincent X. Liu:
A novel propensity modeling approach to estimate the causal impact of acute organ dysfunction on long-term survival in sepsis. - Evan Sholle, Rajesh K. Bollapragada, Thomas R. Campion Jr.:
Research Data Repositories: A Tailored Approach to Secondary Use of Electronic Health Record Data. - Deyu Sun, Gopal Sarda, Steven J. Skube, Anne H. Blaes, Rui Zhang, Genevieve B. Melton:
A Study on Phenotyping and Visualizing Black Box Warnings of Antineoplastic Breast Cancer Medications. - Zhaonan Sun, Ying Li, Soumya Ghosh, Yu Cheng, Amrita Mohan, Cristina Sampaio, Jianying Hu:
Exploring Factors that Associated with Missing Values in Observational Huntington's Disease Study Data. - Sheri R. Tibbs, Karen Chiswell, Sara Calvert:
Making Aggregate Content of ClinicalTrials.gov Freely Available to Everyone. - Terry H. Tsai, Michael D. Gerst, Cyrus Engineer, Harold P. Lehmann:
Prioritizing Quality & Patient Safety Interventions: A Decision Model Approach. - Levon Utidjian, Ritu Khare, Hanieh Razzaghi, Amanda F. Dempsey, Michelle Denburg, Christopher B. Forrest, Charles Bailey:
Developing Computable Phenotypes for Pediatric Chronic Conditions in PEDSnet. - Chunhua Weng, Monika Ahuja, Kate Fultz Hollis, Bernie LaSalle, Shira H. Fischer, Anthony E. Solomonides, Judith R. Logan:
Current Challenges in Clinical Research Informatics: A Survey of AMIA Clinical Research Informatics Working Group (CRI-WG). - Yiye Zhang, Rema Padman:
On Combining Clinical and Cost Pathways for Multimorbid Patients Using Electronic Health Record Data. - Yangmei Zhou, David W. Larson, Elizabeth B. Habermann, James M. Naessens, Hongfang Liu, Sunghwan Sohn:
Prediction of Organ Space Colorectal Surgical Site Infections Using Prognostic Bayesian Networks.
Poster
- Jonathan C. Badger, Eric R. LaRose, Ross Kleiman, Richard L. Berg, James G. Linneman, Richard Hansen, David Page, Peggy L. Peissig:
SCCS for Detection of Differences in Brand and Generic Adverse Drug Events. - Nick Brown, Griffin M. Weber:
Profiles Research Networking Software: Recent Updates and Future Plans. - Brian T. Bucher, Danielle L. Mowery, Melissa Castine, Wendy W. Chapman:
Towards Automatic Detection of Surgical Site Infections. - Evanette Burrows, Charles Bailey:
Standardizing clinical diagnoses: impact of alternate terminology selection. - Pedro J. Caraballo, Jennifer St Sauver, Daniel J. Cronk, Janet E. Olson, John L. Black, Suzette J. Bielinski:
Evolving Pharmacogenomics Test Results and the Burden on Clinical Decision Support Integrated in the Electronic Health Record. - Elizabeth Cary, Aaron M. Secrest, Chrissy Daniels, Wendy W. Chapman, Mike Conway, Danielle L. Mowery:
Classifying Sentiment of Free-Text Comments in Patient Satisfaction Surveys. - Victor M. Castro, Nich Wattanasin, Vivian S. Gainer, Bhaswati Ghosh, Shawn N. Murphy:
Applying Computed Phenotypes Derived from Electronic Health Records in the Partners HealthCare Biobank Using i2b2. - Jieming Chen, Sanchita Bhattacharya, Marina Sirota, Minnie M. Sarwal, Atul J. Butte:
Ethnic and gender disparity in organ transplant clinical trials and electronic health records. - Keith Danahey, Wenndy Hernandez, Samuel L. Volchenboum, Mark J. Ratain, Minoli Perera, Peter H. O'Donnell:
Ethnicity-specific pharmacogenomic clinical decision support in the Genomic Prescribing System. - Pralav P. Dessai, Richie Siburian, Fernando J. Sanz-Vidorreta, Robert W. Follett, Ngan Chau, Douglas S. Bell:
Dashboard for Technology Evaluation and Quality Testing using Interactive Visualization (DTEQTIV) for Federated Clinical Data Networks. - Jessilyn Dunn, Xiao Li, Denis Salins, Michael Snyder:
Consumer Wearable Devices for Health Surveillance and Disease Monitoring. - Joseph Finkelstein, Steven Erde, Joseph V. Errante:
Mobile Data Collection Tool to Document Adverse Events in a Dental Practice. - Kate Fultz Hollis, Timothy E. Burdick, Mary Samuels, Peter Beninato:
Finding Healthy Patients from Electronic Health Records for Research Control Subjects. - Joseph Geraci, Pamela Wilansky, Vincenzo De Luca, Anvesh Roy, James Kennedy, John Strauss:
Phenotyping youth depression for research recruitment using free text from electronic medical record. - Oksana Gologorskaya, Robert F. Hink, Hasan Bijli, Nelson Lee, Vijay Rayanker, Leslie Yuan, Meyeon Park:
Using Observational Medical Outcomes Partnership (OMOP) common data model implementation to develop clinical research data delivery infrastructure. - Michael J. Gurley, Yulia Bushmanova, Arden Brooke Rosten, Firas H. Wehbe:
Interleave: An application for managing registry data repositories based on the OMOP/OHDSI Common Data Model (CDM). - Na Hong, Naresh Prodduturi, Chen Wang, Guoqian Jiang:
Shiny FHIR: Empowering Standards-based, Interoperable Clinical Data Applications Using R. - Kathryn J. Jackson, Elissa Oh, Kathryn Balsley, Marc B. Rosenman, Abel N. Kho, Theresa L. Walunas:
Feasibility of using multi-site electronic health record laboratory data to assess population-level quality measures of diabetes care in Chicago. - Marjorie M. Kelley, Randi E. Foraker, En-Ju D. Lin, Manjusha Kulkarni, Maryam Lustberg, Kathryn E. Weaver:
Barriers and Enablers of Use of a Cardiovascular Health Application in Cancer Survivorship Care. - Jeffrey G. Klann, Vijay A. Raghavan, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
Needs-Driven Data Completeness Dashboard in a Multi-Site Research Network. - Juli D. Klemm, Mervi Heiskanen, Jerry Li, David Miller, Christos Patriotis, George Redmond, Miguel Ossandon, Jacek Capala, Leah E. Mechanic, Yantian Zhang, Rao Divi, Tony Dickherber, Warren A. Kibbe:
The National Cancer Institute (NCI) Informatics Technology for Cancer Research Program (ITCR). - Joseph Klobusický, Alexander Murph, Alexander C. Robinson, Nathaniel D. Bastian, Paul M. Griffin, Shravan Kethireddy, Nathan Ryan:
Machine Learning and Statistical Techniques to Predict Sepsis: Unifying Previous Work. - Fabrício S. P. Kury, Suraj Joshi, James J. Cimino:
Sensitivity Analyses around Missing Data for a Computational Clinical Study on Disseminated Intravascular Coagulation. - Eric R. LaRose, Jonathan C. Badger, Pradap Konda, AnHai Doan, Peggy L. Peissig:
Entity Matching Using Magellan: Matching Drug Reference Tables. - En-Ju D. Lin, Stephen B. Johnson, Chaitanya Shivade, Peter J. Embí, Albert M. Lai:
Understanding the Role of Technology for Screening Participants in Clinical Studies. - Kyle A. Marshall, Shravan Kethireddy, Adam M. Brown, Jeffrey W. Prichard, Myra L. Wilkerson:
Crowdsourcing to Create Structured Data Sets for Quality Improvement. - Nikola Milosevic, Anay Gupta, Austin Chen, Steven DeMarco, Joshua P. Le, Jodi Schneider, Yifan Ning, Goran Nenadic, Richard D. Boyce:
Extraction of Drug-Drug Interactions from Drug Product Labeling Tables. - Danielle L. Mowery, Melissa Castine, Erin Madden, Salomeh Keyhani, Wendy W. Chapman:
Developing and Assessing the Complexity of a Knowledge Base for Extracting Indications from Carotid Ultrasounds for the Veterans Health Administration. - Denis R. Newman-Griffis, Thanh Thieu, Chunxiao Zhou, Diane Brandt, Jonathan Camacho Maldonado, Julia Porcino, Albert M. Lai, Leighton Chan:
Characterizing the Language of Functioning: A Corpus Analysis Illustrating How Human Function is Described in Clinical Text. - Abiodun Otolorin, Nana Osafo, William M. Southerland:
HUeMR: Towards Intuitive Mining of Electronic Medical Records. - Lori C. Phillips, Christopher D. Herrick, Shawn N. Murphy:
i2b2 on OMOP CDM. - Claudia P. Pulgarin, Michael N. Cantor, Stella Yi, Zoe R. Liberman, Rajan Chandras:
Exchange of De-identified Clinical Data that Includes Neighborhood Characteristics. - Hanieh Razzaghi, Ritu Khare, Levon Utidjian, Rachel Teneralli, Charles Bailey:
Managing Science Query Traffic in a Large Pediatric Data Research Network. - Kelly Regan, Jihyung Kil, Dongjo Ban, Gregg M. Gascon, Philip R. O. Payne:
Retrospective Analysis of EHR and Administrative Data for Drug Repurposing Hypothesis Evaluation in Melanoma. - Anna L. Ritko:
Community Detection to Identify Care Pathways of Hip Fracture Surgeries. - Marc B. Rosenman, Elissa Oh, Margaret B. Madden, Kathryn L. Jackson, Jess J. Behrens, Isabel Chung, Satyender Goel, Abel N. Kho:
The Virtue of Venn Diagrams in Visualizing Shared Data: Characterization of a New Citywide Data Repository, HealthLNK. - Samuel C. Rosko, Philip Hansten, John R. Horn, Daniel C. Malone, Andrew Romero, Richard D. Boyce:
Toward shareable individualized drug interaction alerts. - Azza Shoaibi, Brian Neelon, Leslie Lenert:
A flexible Bayesian nonparametric model for preference-based clustering: toward a Netflix-like collaborative filtering algorithm to improve healthcare decisions. - Ebony Smith, Rahul Mudunuri, Oluwaseun J. Ajayi, Venkateswara R. Nagisetty, Teeradache Viangteeravat, Eunice Y. Huang:
The Pediatric Research Database, a Robust Data Mart and Cohort Discovery Tool to Strengthen Research Hypotheses and Facilitate Feasibility Assessment. - Brett R. South, Lee M. Christensen, Danielle L. Mowery, Melissa Castine, Marzieh Vali, Marjorie Carter, Mike Conway, Adi V. Gundlapalli, Wendy W. Chapman, Salomeh Keyhani:
Automatic Extraction of Social Determinants of Health from Veterans Affairs Clinical Documents using Natural Language Processing. - Philip Trevvett, Isha johri, Bhanu Bahl:
Procedures to Ensure Baseline Data Quality for a SHRINE Network. - David Walend, Benjamin Carmen, Marc Ciriello, Isha johri, William Simons, Bhanu Bahl:
Protecting Patient Identity in SHRINE Without Lockout. - Yanshan Wang, Liwei Wang, Majid Rastegar-Mojarad, Sijia Liu, Feichen Shen, Hongfang Liu:
Content Analysis of Free-Text Family History. - Brian Wells, Kristin M. Lenoir, Kelly L. Kuykendall, Ajay Dharod:
A Method for Using Electronic Health Record Data to Predict Admission Risk. - Wei-Hung Weng, Kavishwar B. Wagholikar, Henry C. Chueh:
Classifiers for Identifying the Medical Specialty of Clinical Documents. - Zachary G. Wyner, Juliane S. Reynolds, Chayim Herzig-Marx, Shyam Deval, Adam Rauch, Jeffrey S. Brown, David Martin:
Collection of Patient Provided Information through a Mobile Device Application for Use in Medical Product Safety Surveillance. - Meliha Yetisgen, Lucy Vanderwende:
Automatic Identification of Substance Abuse Events from Clinical Text. - Wen-wai Yim, Sharon W. Kwan, Meliha Yetisgen:
Automatic Liver Cancer Stage Prediction From Free-Text Clinical Notes. - Patrick Yukman, Keith Danahey, Brittany A. Borden, Samuel L. Volchenboum, Mark J. Ratain, Peter H. O'Donnell:
The Pharmacogenomics Research and Implementation DatabasE (PRIDE). - Marianne Zachariah, Ruby Y. Wan, Amanda L. Do, Robert W. Follett, Theona T. Tacorda, Fernando J. Sanz-Vidorreta, Carina V. Hampp, Douglas S. Bell:
An Efficient Service Model for Providing High-Quality, Regulatory-Compliant Research Access to Electronic Health Record Data. - Yangmei Zhou, David W. Larson, Elizabeth B. Habermann, James M. Naessens, Hongfang Liu, Sunghwan Sohn:
Locally Generated Bayesian Network Prediction of Colorectal Surgical Site Infections.
Student Paper
- Vibhu Agarwal, Mathew Smuck, Nigam Shah:
Quantifying the relative change in physical activity after Total Knee Arthroplasty using accelerometer based measurements. - Bora Chang, Manoj Kanagaraj, Ben Neely, Noa Segall, Erich Huang:
Triangulating Methodologies from Software, Medicine and Human Factors Industries to Measure Usability and Clinical Efficacy of Medication Data Visualization in an Electronic Health Record System. - Xin Chen, Yu Wang, Elinor Schoenfeld, Mary M. Saltz, Joel H. Saltz, Fusheng Wang:
Spatio-temporal Analysis for New York State SPARCS Data. - Yadan Fan, Lu He, Serguei V. S. Pakhomov, Genevieve B. Melton, Rui Zhang:
Classifying Supplement Use Status in Clinical Notes. - Jessica M. Haddad, Elizabeth S. Chen:
Identifying Psychiatric Comorbidities for Obstructive Sleep Apnea in the Biomedical Literature and Electronic Health Record. - Andrew J. King, Harry Hochheiser, Shyam Visweswaran, Gilles Clermont, Gregory F. Cooper:
Eye-tracking for clinical decision support: A method to capture automatically what physicians are viewing in the EMR. - Feichen Shen, Sunghwan Sohn, Majid Rastegar-Mojarad, Sijia Liu, Joshua J. Pankratz, Michael Hatton, Nancy Sowada, Om Shrestha, Shawna Shurson, Hongfang Liu:
Populating Physician Biographical Pages Based on EMR Data. - Geoffrey J. Tso, Samson W. Tu, Mark A. Musen, Mary K. Goldstein:
High-Risk Drug-Drug Interactions Between Clinical Practice Guidelines for Management of Chronic Conditions.
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