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Journal of Integrative Bioinformatics, Volume 20
Volume 20, Number 1, March 2023
- Akihiko Konagaya
, Gregory Gutmann, Yuhui Zhang:
Co-creation environment with cloud virtual reality and real-time artificial intelligence toward the design of molecular robots. - Bassam Abdo Al-Hameli, Abdulrahman Ahmad Al-Sewari
Diabetes disease prediction system using HNB classifier based on discretization method. - Savas Takan, Jens Allmer
Community-wide collaboration is a must to reinstall trust in bioinformatics solutions and biomedical interpretation. - Matthias König
Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022. - Frontmatter. i-ii
- Lukas Buecherl
Synthetic biology open language (SBOL) version 3.1.0. - Michael Clerx, Michael T. Cooling, Jonathan Cooper, Alan Garny, Keri R. Moyle, David P. Nickerson
CellML 2.0.1. - James C. Schaff
SBML level 3 package: spatial processes, version 1, release 1.
Volume 20, Number 2, July 2023
- Nicolò Casano, Silvano Junior Santini
Application of machine learning approach in emergency department to support clinical decision making for SARS-CoV-2 infected patients. - André D. Sousa
On the identification of potential novel therapeutic targets for spinocerebellar ataxia type 1 (SCA1) neurodegenerative disease using EvoPPI3. - Carlos A. C. Bastos
Concentration of inverted repeats along human DNA. - Hamed Ghazikhani
Enhanced identification of membrane transport proteins: a hybrid approach combining ProtBERT-BFD and convolutional neural networks. - Frontmatter. i-ii
- Sara Duarte-Pereira
Study of NAD-interacting proteins highlights the extent of NAD regulatory roles in the cell and its potential as a therapeutic target. - Ahmad Muhaimin Ismail
Artificial Bee Colony algorithm in estimating kinetic parameters for yeast fermentation pathway. - Thomas Papastergiou
Discovering NDM-1 inhibitors using molecular substructure embeddings representations.
Volume 20, Number 3, December 2024
- Andrea Marino, Blerina Sinaimeri, Enrico Tronci, Tiziana Calamoneri
STARGATE-X: a Python package for statistical analysis on the REACTOME network. - Jaroslav Budis, Werner Krampl, Marcel Kucharík, Rastislav Hekel, Adrián Goga, Jozef Sitarcík, Michal Lichvár, David Smolak, Miroslav Böhmer, Andrej Baláz, Frantisek Duris, Juraj Gazdarica, Katarina Soltys, Ján Turna, Ján Radvánszky, Tomás Szemes:
SnakeLines: integrated set of computational pipelines for sequencing reads. - Yuriy L. Orlov
BGRS: bioinformatics of genome regulation and data integration. - Yulia E. Uvarova, Pavel S. Demenkov
Accurate noise-robust classification of Bacillus species from MALDI-TOF MS spectra using a denoising autoencoder. - Evgeniya A. Antropova
Reconstruction of the regulatory hypermethylation network controlling hepatocellular carcinoma development during hepatitis C viral infection. - Frontmatter. i-ii
- John Anders
RNAcode_Web - Convenient identification of evolutionary conserved protein coding regions. - Grigory A. Oborotov, Konstantin Koshechkin, Yuriy L. Orlov
Application of Artificial Intelligence or machine learning in risk sharing agreements for pharmacotherapy risk management.
Volume 20, Number 4, January 2024
- Frontmatter. i-ii
- Katharina Wolff, Ronja Friedhoff, Friderieke Schwarzer
Data literacy in genome research. - Jing Chen, Zixiang Wang, Jia Huang:
SAMNA: accurate alignment of multiple biological networks based on simulated annealing. - Haoyu Chao, Shilong Zhang, Yueming Hu, Qingyang Ni, Saige Xin, Liang Zhao, Vladimir A. Ivanisenko
Integrating omics databases for enhanced crop breeding. - Marco Zurdo-Tabernero
An overview of machine learning and deep learning techniques for predicting epileptic seizures. - Lena Raupach
PharmoCo: a graph-based visualization of pharmacogenomic plausibility check reports for clinical decision support systems. - Andreas Ian Lackner
Gene-network based analysis of human placental trophoblast subtypes identifies critical genes as potential targets of therapeutic drugs.
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