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Pavel V. Baranov
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2020 – today
- 2021
- [j18]Stephen J. Kiniry
, Ciara E. Judge
Trips-Viz: an environment for the analysis of public and user-generated ribosome profiling data. Nucleic Acids Res. 49(Webserver-Issue): 662-670 (2021)
2010 – 2019
- 2019
- [j17]Stephen J. Kiniry
Trips-Viz: a transcriptome browser for exploring Ribo-Seq data. Nucleic Acids Res. 47(Database-Issue): D847-D852 (2019) - 2018
- [j16]Md. Rezaul Karim, Audrey M. Michel
Improving data workflow systems with cloud services and use of open data for bioinformatics research. Briefings Bioinform. 19(5): 1035-1050 (2018) - [j15]Audrey M. Michel
GWIPS-viz: 2018 update. Nucleic Acids Res. 46(Database-Issue): D823-D830 (2018) - 2014
- [j14]Audrey M. Michel
Computational approach for calculating the probability of eukaryotic translation initiation from ribo-seq data that takes into account leaky scanning. BMC Bioinform. 15: 380 (2014) - [j13]Audrey M. Michel
GWIPS-viz: development of a ribo-seq genome browser. Nucleic Acids Res. 42(Database-Issue): 859-864 (2014) - 2013
- [j12]Patrick B. F. O'Connor, Gene-Wei Li, Jonathan S. Weissman
rRNA: mRNA pairing alters the length and the symmetry of mRNA-protected fragments in ribosome profiling experiments. Bioinform. 29(12): 1488-1491 (2013) - [j11]Ivan Antonov
GeneTack database: genes with frameshifts in prokaryotic genomes and eukaryotic mRNA sequences. Nucleic Acids Res. 41(Database-Issue): 152-156 (2013) - [j10]Anmol M. Kiran
Darned in 2013: inclusion of model organisms and linking with Wikipedia. Nucleic Acids Res. 41(Database-Issue): 258-261 (2013) - 2012
- [j9]Virag Sharma
CodonLogo: a sequence logo-based viewer for codon patterns. Bioinform. 28(14): 1935-1936 (2012) - 2010
- [j8]Anmol M. Kiran
DARNED: a DAtabase of RNa EDiting in humans. Bioinform. 26(14): 1772-1776 (2010) - [j7]Michaël Bekaert
Recode-2: new design, new search tools, and many more genes. Nucleic Acids Res. 38(Database-Issue): 69-74 (2010)
2000 – 2009
- 2008
- [j6]Michaël Bekaert
Ornithine decarboxylase antizyme finder (OAF): Fast and reliable detection of antizymes with frameshifts in mRNAs. BMC Bioinform. 9 (2008) - 2006
- [j5]Michaël Bekaert
ARFA: a program for annotating bacterial release factor genes, including prediction of programmed ribosomal frameshifting. Bioinform. 22(20): 2463-2465 (2006) - 2003
- [j4]Pavel V. Baranov
RECODE 2003. Nucleic Acids Res. 31(1): 87-89 (2003) - 2001
- [j3]Pavel V. Baranov
RECODE: a database of frameshifting, bypassing and codon redefinition utilized for gene expression. Nucleic Acids Res. 29(1): 264-267 (2001)
1990 – 1999
- 1999
- [j2]Pavel V. Baranov
The Database of Ribosomal Cross-links: an update. Nucleic Acids Res. 27(1): 184-185 (1999) - 1998
- [j1]Pavel V. Baranov
The Database of Ribosomal Cross links (DRC). Nucleic Acids Res. 26(1): 187-189 (1998)
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