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Ziding Zhang
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2020 – today
- 2024
- [j17]Xiaodi Yang
, Stefan Wuchty, Zeyin Liang, Li Ji, Bingjie Wang, Jialin Zhu, Ziding Zhang
Multi-modal features-based human-herpesvirus protein-protein interaction prediction by using LightGBM. Briefings Bioinform. 25(2) (2024) - 2023
- [j16]Yan Huang, Stefan Wuchty, Yuan Zhou, Ziding Zhang
SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network. Briefings Bioinform. 24(2) (2023) - 2021
- [j15]Xiaodi Yang
HVIDB: a comprehensive database for human-virus protein-protein interactions. Briefings Bioinform. 22(2): 832-844 (2021) - [j14]Xianyi Lian
Current status and future perspectives of computational studies on human-virus protein-protein interactions. Briefings Bioinform. 22(5) (2021) - [j13]Xiaodi Yang
Transfer learning via multi-scale convolutional neural layers for human-virus protein-protein interaction prediction. Bioinform. 37(24): 4771-4778 (2021) - [c1]Xiaodi Yang, Ziding Zhang, Stefan Wuchty:
Multi-scale Convolutional Neural Networks for the Prediction of Human-virus Protein Interactions. ICAART (2) 2021: 41-48 - 2020
- [j12]Xianyi Lian, Xiaodi Yang, Jiqi Shao, Fujun Hou, Shiping Yang, Dongli Pan
Prediction and analysis of human-herpes simplex virus type 1 protein-protein interactions by integrating multiple methods. Quant. Biol. 8(4): 312-324 (2020)
2010 – 2019
- 2019
- [j11]Shiping Yang, Hong Li
Critical assessment and performance improvement of plant-pathogen protein-protein interaction prediction methods. Briefings Bioinform. 20(1): 274-287 (2019) - [j10]Shiwei Ma, Qi Song
Prediction of protein-protein interactions between fungus (Magnaporthe grisea) and rice (Oryza sativa L.). Briefings Bioinform. 20(2): 448-456 (2019) - 2018
- [j9]Huan Qi
PlaD: A Transcriptomics Database for Plant Defense Responses to Pathogens, Providing New Insights into Plant Immune System. Genom. Proteom. Bioinform. 16(4): 283-293 (2018) - 2015
- [j8]Zhen Chen
Towards more accurate prediction of ubiquitination sites: a comprehensive review of current methods, tools and features. Briefings Bioinform. 16(4): 640-657 (2015) - [j7]Xiaobao Dong
BEAN 2.0: an integrated web resource for the identification and functional analysis of type III secreted effectors. Database J. Biol. Databases Curation 2015 (2015) - [j6]Yuan Zhou, Shiping Yang, Tonglin Mao, Ziding Zhang:
MAPanalyzer: a novel online tool for analyzing microtubule-associated proteins. Database J. Biol. Databases Curation 2015 (2015) - 2011
- [j5]Ren-Xiang Yan, Zhen Chen
Outer membrane proteins can be simply identified using secondary structure element alignment. BMC Bioinform. 12: 76 (2011) - [j4]Chuan Wang, Ren-Xiang Yan, Xiao-Feng Wang, Jing-Na Si, Ziding Zhang
Comparison of linear gap penalties and profile-based variable gap penalties in profile-profile alignments. Comput. Biol. Chem. 35(5): 308-318 (2011)
2000 – 2009
- 2009
- [j3]Ren-Xiang Yan, Jing-Na Si, Chuan Wang, Ziding Zhang
DescFold: A web server for protein fold recognition. BMC Bioinform. 10: 416 (2009) - 2008
- [j2]Yong-Zi Chen
Prediction of mucin-type O-glycosylation sites in mammalian proteins using the composition of k-spaced amino acid pairs. BMC Bioinform. 9 (2008) - 2006
- [j1]Laurence Miguet, Ziding Zhang
Comparison of a homology model and the crystallographic structure of human 11β-hydroxysteroid dehydrogenase type 1 (11βHSD1) in a structure-based identification of inhibitors. J. Comput. Aided Mol. Des. 20(2): 67-81 (2006)
Coauthor Index
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