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Jonathan Schug
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2010 – 2019
- 2018
- [j10]David E. Condon, Phu V. Tran, Yu-Chin Lien
, Jonathan Schug, Michael K. Georgieff, Rebecca A. Simmons
Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus. BMC Bioinform. 19(1): 31:1-31:12 (2018) - 2011
- [j9]Gregory R. Grant
Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM). Bioinform. 27(18): 2518-2528 (2011) - [j8]Hongbo M. Xie
Mitochondrial Genome Sequence Analysis: A custom bioinformatics pipeline substantially improves Affymetrix MitoChip v2.0 call rate and accuracy. BMC Bioinform. 12: 402 (2011) - [j7]Yan Gao, Jonathan Schug, Lindsay B. McKenna, John Le Lay, Klaus H. Kaestner, Linda E. Greenbaum:
Tissue-specific regulation of mouse MicroRNA genes in endoderm-derived tissues. Nucleic Acids Res. 39(2): 454-463 (2011)
2000 – 2009
- 2007
- [j6]Joan M. Mazzarelli, John Brestelli, Regina K. Gorski, Junmin Liu, Elisabetta Manduchi, Deborah F. Pinney, Jonathan Schug, Peter White
EPConDB: a web resource for gene expression related to pancreatic development, beta-cell function and diabetes. Nucleic Acids Res. 35(Database-Issue): 751-755 (2007) - [c4]Jonathan Schug, Max Mintz, Christian J. Stoeckert Jr.:
Data Integration and Pattern-Finding in Biological Sequence with TESS's Annotation Grammar and Extraction Language (AnGEL). DILS 2007: 188-203 - 2003
- [j5]Amit Bahl, Brian P. Brunk, Jonathan Crabtree, Martin J. Fraunholz, Bindu Gajria, Gregory R. Grant
PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data. Nucleic Acids Res. 31(1): 212-215 (2003) - 2002
- [j4]Rajeev Alur, Calin Belta, Vijay Kumar, Max Mintz, George J. Pappas
Modeling and analyzing biomolecular networks. Comput. Sci. Eng. 4(1): 20-31 (2002) - [j3]Amit Bahl, Brian P. Brunk, Ross L. Coppel, Jonathan Crabtree, Sharon J. Diskin, Martin J. Fraunholz
PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished). Nucleic Acids Res. 30(1): 87-90 (2002) - [c3]Rajeev Alur, Calin Belta, Franjo Ivancic, Vijay Kumar, Harvey Rubin, Jonathan Schug, Oleg Sokolsky, Jonathan Webb:
Visual Programming for Modeling and Simulation of Biomolecular Regulatory Networks. HiPC 2002: 702-712 - 2001
- [j2]Christian J. Stoeckert Jr., Angel D. Pizarro
A relational schema for both array-based and SAGE gene expression experiments. Bioinform. 17(4): 300-308 (2001) - [j1]Susan B. Davidson, Jonathan Crabtree, Brian P. Brunk, Jonathan Schug, Val Tannen, G. Christian Overton, Christian J. Stoeckert Jr.:
K2/Kleisli and GUS: Experiments in integrated access to genomic data sources. IBM Syst. J. 40(2): 512-531 (2001) - [c2]Calin Belta, Jonathan Schug, Thao Dang, Vijay Kumar, George J. Pappas, Harvey Rubin, Paul Dunlap:
Stability and reachability analysis of a hybrid model of luminescence in the marine bacterium Vibrio fischeri. CDC 2001: 869-874
1990 – 1999
- 1997
- [c1]Jonathan Schug, G. Christian Overton:
Modeling Transcription Factor Binding Sites with Gibbs Sampling and Minimum Description Length Encoding. ISMB 1997: 268-271
Coauthor Index
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