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Michael E. Wall
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2020 – today
- 2024
- [j9]Felix Wittwer, Nicholas K. Sauter, Derek Mendez, Billy K. Poon, Aaron S. Brewster, James M. Holton, Michael E. Wall, William E. Hart, Deborah Bard, Johannes P. Blaschke:
Accelerating x-ray tracing for exascale systems using Kokkos. Concurr. Comput. Pract. Exp. 36(5) (2024) - [j8]Samuel Temple Reeve, Jean-Luc Fattebert, Stephen Dewitt, Pablo Seleson, David Joy, Stuart R. Slattery, Aaron Scheinberg, Rene Halver, Christoph Junghans, Christian F. A. Negre, Michael E. Wall, Yu Zhang, Anders M. N. Niklasson, James F. Belak, Susan M. Mniszewski, Danny Perez:
Co-design for Particle Applications at Exascale. Comput. Sci. Eng. 26(2): 43-52 (2024) - 2022
- [i3]Felix Wittwer, Nicholas K. Sauter, Derek Mendez, Billy K. Poon, Aaron S. Brewster, James M. Holton, Michael E. Wall, William E. Hart, Deborah Bard, Johannes P. Blaschke:
Accelerating X-Ray Tracing for Exascale Systems using Kokkos. CoRR abs/2205.07976 (2022) - 2021
- [j7]Susan M. Mniszewski, James F. Belak, Jean-Luc Fattebert, Christian F. A. Negre, Stuart R. Slattery, Adetokunbo A. Adedoyin, Robert F. Bird, Choong-Seock Chang, Guangye Chen, Stéphane Ethier, Shane Fogerty, Salman Habib, Christoph Junghans, Damien Lebrun-Grandié, Jamaludin Mohd-Yusof, Stan G. Moore, Daniel Osei-Kuffuor, Steven J. Plimpton, Adrian Pope, Samuel Temple Reeve, Lee F. Ricketson, Aaron Scheinberg, Amil Y. Sharma, Michael E. Wall:
Enabling particle applications for exascale computing platforms. Int. J. High Perform. Comput. Appl. 35(6): 572-597 (2021) - [i2]Adetokunbo Adedoyin, Christian F. A. Negre, Jamaludin Mohd-Yusof, Nicolas Bock, Daniel Osei-Kuffuor, Jean-Luc Fattebert, Michael E. Wall, Anders M. N. Niklasson, Susan M. Mniszewski:
Performance Optimizations of Recursive Electronic Structure Solvers targeting Multi-Core Architectures (LA-UR-20-26665). CoRR abs/2102.08505 (2021) - [i1]Susan M. Mniszewski, James F. Belak, Jean-Luc Fattebert, Christian F. A. Negre, Stuart R. Slattery, Adetokunbo Adedoyin, Robert F. Bird, Choong-Seock Chang, Guangye Chen, Stéphane Ethier, Shane Fogerty, Salman Habib, Christoph Junghans, Damien Lebrun-Grandié, Jamaludin Mohd-Yusof, Stan G. Moore, Daniel Osei-Kuffuor, Steven J. Plimpton, Adrian Pope, Samuel Temple Reeve, Lee F. Ricketson, Aaron Scheinberg, Amil Y. Sharma, Michael E. Wall:
Enabling particle applications for exascale computing platforms. CoRR abs/2109.09056 (2021)
2010 – 2019
- 2019
- [j6]Jaewoon Jung, Wataru Nishima, Marcus Daniels, Gavin Bascom, Chigusa Kobayashi, Adetokunbo Adedoyin, Michael E. Wall, Anna Lappala, Dominic Phillips, William Fischer, Chang-Shung Tung, Tamar Schlick, Yuji Sugita, Karissa Y. Sanbonmatsu:
Scaling molecular dynamics beyond 100, 000 processor cores for large-scale biophysical simulations. J. Comput. Chem. 40(21): 1919-1930 (2019) - 2013
- [c3]Karin Verspoor, Andrew MacKinlay, Judith D. Cohn, Michael E. Wall:
Detection of Protein Catalytic Sites in the Biomedical Literature. Pacific Symposium on Biocomputing 2013: 433-444 - 2012
- [j5]K. E. Ravikumar, Haibin Liu, Judith D. Cohn, Michael E. Wall, Karin Verspoor:
Literature mining of protein-residue associations with graph rules learned through distant supervision. J. Biomed. Semant. 3(S-3): S2 (2012) - 2011
- [j4]Michael E. Wall, Sindhu Raghavan, Judith D. Cohn, John Dunbar:
Genome Majority Vote Improves Gene Predictions. PLoS Comput. Biol. 7(11) (2011) - [c2]K. E. Ravikumar, Haibin Liu, Judith D. Cohn, Michael E. Wall, Karin Verspoor:
Pattern Learning through Distant Supervision for Extraction of Protein-Residue Associations in the Biomedical Literature. ICMLA (2) 2011: 59-65
2000 – 2009
- 2009
- [j3]Michael E. Wall, David A. Markowitz, Judah L. Rosner, Robert G. Martin:
Model of Transcriptional Activation by MarA in Escherichia coli. PLoS Comput. Biol. 5(12) (2009) - 2007
- [j2]Dengming Ming, Michael E. Wall, Kevin Y. Sanbonmatsu:
Domain motions of Argonaute, the catalytic engine of RNA interference. BMC Bioinform. 8 (2007) - 2005
- [c1]Mary J. Dunlop, Michael E. Wall:
Robustness in gene circuits: clustering of functional responses. ACC 2005: 4411-4416 - 2001
- [j1]Michael E. Wall, Patricia A. Dyck, Thomas S. Brettin:
SVDMAN-singular value decomposition analysis of microarray data. Bioinform. 17(6): 566-568 (2001)
Coauthor Index
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