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Benzhuo Lu
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2020 – today
- 2024
- [j30]Wenxuan Zhang
, Benzhuo Lu
Stock Trend Prediction with Machine Learning: Incorporating Inter-Stock Correlation Information through Laplacian Matrix. Big Data Cogn. Comput. 8(6): 56 (2024) - [j29]Minrui Lv
A flux-based moving mesh method applied to solving the Poisson-Nernst-Planck equations. J. Comput. Phys. 513: 113169 (2024) - [j28]Sidi Wu
Solving parametric elliptic interface problems via interfaced operator network. J. Comput. Phys. 514: 113217 (2024) - [j27]Sheng Gui, Benzhuo Lu, Weilin Yu:
Ion Transport in Dipolar Medium I: A Local Dielectric Poisson-Nernst-Planck/Poisson-Boltzmann Model. SIAM J. Appl. Math. 84(5): 2110-2131 (2024) - 2023
- [j26]Keying Ma
Parameter-Efficient Densely Connected Dual Attention Network for Phonocardiogram Classification. IEEE J. Biomed. Health Informatics 27(9): 4240-4249 (2023) - [i6]Sidi Wu, Aiqing Zhu, Yifa Tang, Benzhuo Lu:
Solving parametric elliptic interface problems via interfaced operator network. CoRR abs/2308.14537 (2023) - 2022
- [j25]Qianru Zhang, Bin Tu, Qiaojun Fang, Benzhuo Lu:
A structure-preserving finite element discretization for the time-dependent Nernst-Planck equation. J. Appl. Math. Comput. 68(3): 1545-1564 (2022) - [j24]Qianru Zhang, Qin Wang
A class of finite element methods with averaging techniques for solving the three-dimensional drift-diffusion model in semiconductor device simulations. J. Comput. Phys. 458: 111086 (2022) - [j23]Sidi Wu
INN: Interfaced neural networks as an accessible meshless approach for solving interface PDE problems. J. Comput. Phys. 470: 111588 (2022) - [j22]Wanwan Zhu, Ying Yang
Residual Type a Posteriori Error Estimates for the Time-Dependent Poisson-Nernst-Planck Equations. J. Sci. Comput. 90(1): 27 (2022) - [i5]Zhen Chao, Sheng Gui, Benzhuo Lu, Dexuan Xie:
Efficient Generation of Membrane and Solvent Tetrahedral Meshes for Ion Channel Finite Element Calculation. CoRR abs/2201.05707 (2022) - [i4]Sidi Wu, Aiqing Zhu, Benzhuo Lu:
On convergence of neural network methods for solving elliptic interface problems. CoRR abs/2203.03407 (2022) - 2021
- [j21]Qin Wang
A stabilized finite element method for the Poisson-Nernst-Planck equations in three-dimensional ion channel simulations. Appl. Math. Lett. 111: 106652 (2021) - [j20]Jinyong Ying, Ronghong Fan, Jiao Li, Benzhuo Lu:
A new block preconditioner and improved finite element solver of Poisson-Nernst-Planck equation. J. Comput. Phys. 430: 110098 (2021) - [i3]Ruigang Shen, Qianru Zhang, Benzhuo Lu:
An inverse averaging finite element method for solving the size-modified Poisson-Nernst-Planck equations in ion channel simulations. CoRR abs/2112.01692 (2021) - 2020
- [j19]Ying Yang, Ming Tang, Chun Liu, Benzhuo Lu, Liuqiang Zhong
Superconvergent gradient recovery for nonlinear Poisson-Nernst-Planck equations with applications to the ion channel problem. Adv. Comput. Math. 46(6): 78 (2020) - [j18]Sheng Gui
Molecular Sparse Representation by a 3D Ellipsoid Radial Basis Function Neural Network via L1 Regularization. J. Chem. Inf. Model. 60(12): 6054-6064 (2020) - [j17]Qianru Zhang, Sheng Gui, Hongliang Li, Benzhuo Lu:
Model reduction-based initialization methods for solving the Poisson-Nernst-Plank equations in three-dimensional ion channel simulations. J. Comput. Phys. 419: 109627 (2020) - [j16]Ruigang Shen
A decoupling two-grid method for the time-dependent Poisson-Nernst-Planck equations. Numer. Algorithms 83(4): 1613-1651 (2020) - [j15]Dexuan Xie
An Effective Finite Element Iterative Solver for a Poisson-Nernst-Planck Ion Channel Model with Periodic Boundary Conditions. SIAM J. Sci. Comput. 42(6): B1490-B1516 (2020) - [i2]Sheng Gui, Zhaodi Chen, Minxin Chen, Benzhuo Lu:
Molecular Sparse Representation by 3D Ellipsoid Radial Basis Function Neural Networks via $L_1$ Regularization. CoRR abs/2005.05307 (2020)
2010 – 2019
- 2019
- [j14]Jiao Li, Jinyong Ying, Benzhuo Lu:
A flux-jump preserved gradient recovery technique for accurately predicting the electrostatic field of an immersed biomolecule. J. Comput. Phys. 396: 193-208 (2019) - [i1]Sheng Gui, Minxin Chen, Benzhuo Lu:
Sparse Representation of Gaussian Molecular Surface. CoRR abs/1909.09095 (2019) - 2018
- [j13]Xuejiao Liu
Analysis of the Mean Field Free Energy Functional of Electrolyte Solution with Nonhomogenous Boundary Conditions and the Generalized PB/PNP Equations with Inhomogeneous Dielectric Permittivity. SIAM J. Appl. Math. 78(2): 1131-1154 (2018) - [j12]Tiantian Liu, Minxin Chen, Benzhuo Lu:
Efficient and Qualified Mesh Generation for Gaussian Molecular Surface Using Adaptive Partition and Piecewise Polynomial Approximation. SIAM J. Sci. Comput. 40(2) (2018) - [j11]Sheng Gui, Dawar Khan
Frontiers in biomolecular mesh generation and molecular visualization systems. Vis. Comput. Ind. Biomed. Art 1: 1-13 (2018) - 2016
- [j10]Jianbo Lu, Guoliang Xu, Shihua Zhang, Benzhuo Lu:
An effective sequence-alignment-free superpositioning of pairwise or multiple structures with missing data. Algorithms Mol. Biol. 11: 18 (2016) - 2015
- [j9]Bin Tu, Yan Xie, Linbo Zhang, Benzhuo Lu:
Stabilized finite element methods to simulate the conductances of ion channels. Comput. Phys. Commun. 188: 131-139 (2015) - [j8]Bo Zhang, Bo Peng, Jingfang Huang, Nikos P. Pitsianis
Parallel AFMPB solver with automatic surface meshing for calculation of molecular solvation free energy. Comput. Phys. Commun. 190: 173-181 (2015) - 2013
- [j7]Benzhuo Lu, Xiaolin Cheng, Jingfang Huang, James Andrew McCammon
AFMPB: An adaptive fast multipole Poisson-Boltzmann solver for calculating electrostatics in biomolecular systems. Comput. Phys. Commun. 184(11): 2618-2619 (2013) - [j6]Bin Tu, Minxin Chen, Yan Xie, Linbo Zhang
A parallel finite element simulator for ion transport through three-dimensional ion channel systems. J. Comput. Chem. 34(24): 2065-2078 (2013) - 2010
- [j5]Benzhuo Lu, Xiaolin Cheng, Jingfang Huang, James Andrew McCammon
AFMPB: An adaptive fast multipole Poisson-Boltzmann solver for calculating electrostatics in biomolecular systems. Comput. Phys. Commun. 181(6): 1150-1160 (2010) - [j4]Benzhuo Lu, Michael J. Holst, James Andrew McCammon
Poisson-Nernst-Planck equations for simulating biomolecular diffusion-reaction processes I: Finite element solutions. J. Comput. Phys. 229(19): 6979-6994 (2010)
2000 – 2009
- 2007
- [j3]Benzhuo Lu, Xiaolin Cheng, James Andrew McCammon
"New-version-fast-multipole-method" accelerated electrostatic calculations in biomolecular systems. J. Comput. Phys. 226(2): 1348-1366 (2007) - 2006
- [j2]Tingjun Hou, Ken Chen
Computational Analysis and Prediction of the Binding Motif and Protein Interacting Partners of the Abl SH3 Domain. PLoS Comput. Biol. 2(1) (2006) - 2004
- [j1]Y. H. Yu, Benzhuo Lu, J. G. Han, P. F. Zhang:
Scoring protein-protein docked structures based on the balance and tightness of binding. J. Comput. Aided Mol. Des. 18(4): 251-260 (2004)
Coauthor Index
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last updated on 2024-10-22 20:09 CEST by the dblp team
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