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Shaoyong Lu
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2020 – today
- 2023
- [j15]Jinyin Zha, Qian Li, Xinyi Liu, Weidong Lin, Tingting Wang, Jiacheng Wei, Ziliang Zhang, Xun Lu, Jing Wu, Duan Ni
, Kun Song, Liang Zhang, Xuefeng Lu, Shaoyong Lu
AlloReverse: multiscale understanding among hierarchical allosteric regulations. Nucleic Acids Res. 51(W1): 33-38 (2023) - 2022
- [j14]Hao Zhang, Duan Ni, Jigang Fan, Minyu Li, Jian Zhang
Markov State Models and Molecular Dynamics Simulations Reveal the Conformational Transition of the Intrinsically Disordered Hypervariable Region of K-Ras4B to the Ordered Conformation. J. Chem. Inf. Model. 62(17): 4222-4231 (2022) - 2020
- [j13]Xinyi Liu, Shaoyong Lu, Kun Song, Qiancheng Shen, Duan Ni, Qian Li, Xinheng He
Unraveling allosteric landscapes of allosterome with ASD. Nucleic Acids Res. 48(Database-Issue): D394-D401 (2020)
2010 – 2019
- 2019
- [j12]Xiaoli An, Shaoyong Lu, Kun Song, Qiancheng Shen, Meilan Huang
Are the Apo Proteins Suitable for the Rational Discovery of Allosteric Drugs? J. Chem. Inf. Model. 59(1): 597-604 (2019) - [j11]Kun Song, Qian Li, Wei Gao
AlloDriver: a method for the identification and analysis of cancer driver targets. Nucleic Acids Res. 47(Webserver-Issue): W315-W321 (2019) - 2018
- [j10]Min Huang, Kun Song, Xinyi Liu, Shaoyong Lu, Qiancheng Shen, Renxiao Wang
AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses. Nucleic Acids Res. 46(Webserver-Issue): W451-W458 (2018) - 2017
- [j9]Kun Song, Xinyi Liu, Wenkang Huang, Shaoyong Lu, Qiancheng Shen, Lu Zhang, Jian Zhang
Improved Method for the Identification and Validation of Allosteric Sites. J. Chem. Inf. Model. 57(9): 2358-2363 (2017) - 2016
- [j8]Shuai Li, Qiancheng Shen, Minyi Su
Alloscore: a method for predicting allosteric ligand-protein interactions. Bioinform. 32(10): 1574-1576 (2016) - [j7]Qiancheng Shen, Guanqiao Wang, Shuai Li, Xinyi Liu, Shaoyong Lu, Zhongjie Chen, Kun Song, Junhao Yan, Lv Geng, Zhimin Huang
ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks. Nucleic Acids Res. 44(Database-Issue): 527-535 (2016) - 2015
- [j6]Wenkang Huang, Guanqiao Wang, Qiancheng Shen, Xinyi Liu, Shaoyong Lu, Lv Geng, Zhimin Huang
ASBench: benchmarking sets for allosteric discovery. Bioinform. 31(15): 2598-2600 (2015) - 2014
- [j5]Zhimin Huang
ASD v2.0: updated content and novel features focusing on allosteric regulation. Nucleic Acids Res. 42(Database-Issue): 510-516 (2014) - [j4]Shaoyong Lu, Wenkang Huang, Qi Wang, Qiancheng Shen, Shuai Li, Ruth Nussinov
The Structural Basis of ATP as an Allosteric Modulator. PLoS Comput. Biol. 10(9) (2014) - 2013
- [j3]Wenkang Huang, Shaoyong Lu, Zhimin Huang
Allosite: a method for predicting allosteric sites. Bioinform. 29(18): 2357-2359 (2013) - [j2]Ting Shi, Yuhui Han, Weihua Li, Yanlong Zhao, Yaqin Liu, Zhimin Huang
Exploring the Desumoylation Process of SENP1: A Study Combined MD Simulations with QM/MM Calculations on SENP1-SUMO1-RanGAP1. J. Chem. Inf. Model. 53(9): 2360-2368 (2013) - 2012
- [j1]Shaoyong Lu, Wenkang Huang, Xiaobai Li, Zhimin Huang
Insights into the Role of Magnesium Triad in myo-Inositol Monophosphatase: Metal Mechanism, Substrate Binding, and Lithium Therapy. J. Chem. Inf. Model. 52(9): 2398-2409 (2012)
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